ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1054887 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◣ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Gm33887
Dhdds
Mindy4
Nufip2
Zfp800
Barhl1
Lmo1
Med25
Fuz
Nhsl1
Dhx32
Zfp608
Mrpl28
Cldn34d
Pcyt1b
Fzd8
Kpna1
Eif5a2
Arid1b
Stk11ip
Rspry1
Psme3ip1
Pou2f1
Gtf2a1l
Zfhx4
Lrrn2
Ccn1
Notch1
Abca4
Tnrc18
Fam181b
Enc1
Yeats4
Treml4
Myt1l
Rabl3
Gtf2e1
Il18
Bco2
Adgrv1
Cntnap2
Mov10l1
Mlc1
Dhrs3
C1qtnf1
Msi1
Lxn
Eif1ad
Banf1
Mro
Fgfr2
H2aj
H4f16
Smim38
Phf23
Gabarap
Dvl2
Dtna
Cpsf6
Pmpcb
Erbb4
Dmrt3
Zfp623
Surf6
Nog
Slc45a3
Kazald1
Fgd4
Vldlr
Sox2
Prdm12
Cpt1a
Lhx8
Banp
Car5a
Ptbp1
Adtrp
Cep170
Nr2e1
Mmut
Cenpq
Polr3k
Zfp9
Sh3bp4
Taf12
Insm1
Sybu
Zscan22
Vax1
Lipg
Lhx2
Tmprss11e
Tbc1d22a
Myo10
Lingo2
Epc1
Sall3
Clasp1
Abhd6
Ska2
Prr11
Khsrp
Polr2e
Npas1
Zfp428
Zmym4
Pcdh8
Cilp
A2m
Nfkbiz
Igsf3
Ttc41
Hsp90b1
Ptger2
Lix1
Lmo3
Mafb
Epb41l5
Epha4
Nrf1
Grik3
Ndufa4l2
Atp2b2
Hes5
Gdi2
Olfr806
Gtf2ird1
Pkdcc
Tle4
Myd88
Acaa1a
Sap30bp
Recql5
Hsbp1
Tal2
Serpine2
Pcnx3
Map3k11
Mettl8
Dcaf17
Gpc6
Zc3h12c
Tprgl
Senp7
Psat1
Ascl1
Gas1
Krr1
Rhobtb2
Adnp
Nemf
Ccdc177
Kdm2b
Elavl4
Ermn
Hpgd
Camk2a
Duxbl3
Duxbl2
Duxbl1
Mecp2
Plxnc1
Clu
Rnh1
Bmpr1b
Xxylt1
Rtraf
Poc5
Edar
Ankrd40
Parp11
Dtd2
Alg8
Kmt5c
Zfp219
Zfp180
Trib1
Fsbp
Ctbp2
Tnfrsf19
Tex26
Sec61b
Alg2
Med6
Tcf7l2
Cwc22
Zfp574
Grik5
Dipk1c
Virma
Ctdsp1
Pigo
Skor1
Slc1a5
Drosha
6030458C11Rik
Ccnd2
Zfp729a
Chek2
Mdm1
Wdr89
Naa50
Atp6v1a
Rnf130
Mzf1
Calr3
1700030K09Rik
Asf1b
Cpe
Thsd7a
N4bp2l2
Stk10
Ppia
Psmd11
Trim35
Sufu
Actr1a
Sorbs2
Tmem107
Nbeal2
Ccdc12
Gm5165
Pou3f4
Klhdc8b
Ccdc71
Prmt1
Snrpc
Prdm13
Tet3
Gsg1l
Cep120
Rpl13a
Rps11
Pipox
Tle3
Polg
Arfip1
Lrrc42
Hspb11
Gpr142
Btbd17
Optc
Mrpl23
Gbx2
Mtus1
Hivep3
Myt1
Clcn3
Limch1
Lmln
Rtn4
Zfp386
B3gnt2
Helt
Dhrs7b
Zhx2
H2bc4
H2ac6
Rpf1
Bdnf
Slc38a9
Cntn6
Ifrd2
Brms1l
Nuak2
Il31ra
Tle6
Polr3b
Sft2d1
Trim11
Tacc1
Riok2
Klhl18
Kif9
Pdgfra
Arih1
Brwd3
Sost
Vps28
Ankrd11
Arvcf
Gulp1
Rax
Creb5
Ago2
Zswim1
Spata25
Tmem47
Bahcc1
Tysnd1
Ajuba
Dyrk3
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Btbd8
Ncaph
Rcn3
Dcaf11
Sec13
Slamf8
Tigd2
Otx2
Slc35b1
Numa1
Neurl2
Ctsa
Prrx1
Vta1
Pld1
Kiss1
Rgs13
Stk35
Gng2
1700113H08Rik
Cds2
Sv2b
Ndst1
Slc4a5
Fezf1
Tspan9
Pax7
Ssx2ip
Jph2
Tbc1d10b
Mylpf
Hexim1
Psd3
Lrr1
Grm4
Rfx4
Ing2
Dusp6
Igfbpl1
Arhgef10l
Prr15
Knl1
Gm973
4833420G17Rik
Grcc10
Ptpn6
Rpusd1
Chtf18
Prlhr
Dennd2a
Six3
Igfbp2
Tmx1
Cox7a2l
Ankrd29
Shbg
Ear10
Sat2
Clasp2
Fam118a
Tspan17
Sfxn1
Camk1g
Plpp3
Ubc
Tom1l1
Arhgap15
Sall4
Eef1a1
Marcks
Mpeg1
Polr3h
Rere
Fzd10
Mtf2
Oma1
Gba
Cdh17
Pip4p2
Tmem67
Rbm12b2
Marchf9
Thyn1
Acad8
Itfg2
Ostc
Prmt3
Yipf1
Nup205
Lrp8
Pappa
Imp4
Ccdc115
Inip
Mrps28
Sulf1
Abcf2
Tdrd9
Atp5mpl
Mapkapk2
Luc7l
Thoc3
Hs6st1
Ptpn21
Usp39
0610030E20Rik
Hnrnph1
Urm1
Hacd3
Ttyh1
Kdm4a
Txnl4b
Dhx38
Zfp622
Cacng4
Zkscan5
Zkscan14
Zfp960
Srek1
Bcar3
Nupl1
Klhl9
Tcf7l1
Cyfip2
Prcc
Znrd1as
Znrd1
Adamtsl1
Igf2bp3
6720489N17Rik
Borcs6
Mc4r
Tpm3
Twistnb
Tcf12
Prickle2
Ascc3
Tmem218
Itm2b
Cntln
Mcm3
Cdk12
Esrrb
Tmem135
Men1
Fzd4
Maz
Dcdc5
Sall2
Camsap1
Ext1
Emc7
Muc1
Ccpg1os
Ccpg1
Slc39a9
Erh
Lrrtm2
Osbpl1a
Havcr1
Rapgef4
Kat6b
Sema4c
Spop
Wwox
H4c17
Rpp25
Smpd4
Itgbl1
Med23
4930583I09Rik
Zfp317
Ell2
Bfsp1
Pofut1
Plagl2
Rab7
Tcf4
Lypd4
Dmrtc2
Phf5a
Aco2
Slc18a1
Atp6v1b2
Cdk1
Anp32e
Dapp1
Cwc25
Nes
Gjd2
Txndc16
Gpr137c
Psma1
Rcan1
Uchl1
Fat4
Nifk
Peak1
Hmg20a
Wdr95
Ints12
Gstcd
Prepl
Camkmt
Ssc5d
Nat14
Ccdc190
Colec10
Rps8
Dll4
Stmnd1
Hunk
Cyth1
Rhod
Ndufb4
Fabp7
Syncrip
Rnase4
Ang
Mob3a
Izumo4
Sox5
Ttll9
Pprc1
Tecr
Ppan
Cdkl3
Ncald
Ube2b
Flcn
Col5a2
Taf13
Igsf10
Jarid2
Itgb8
Tgif1
Irf2bpl
Zfp609
Ppp1r9a
Mycl
Scg2
Abcd2
Tomm20
Brms1
Zfp503
B4gat1
Irx3
Utp3
Sec22a
Lmo2
Wdr33
Zcchc14
Sfswap
Seh1l
Kcng3
Gm51425
Atxn1
Aff4
Celf2
Stap2
Mpnd
Map4
Cry1
Itgb5
Noct
Pcdhgc5
Pcdhgc4
Npcd
Cbx6
Mettl3
Rplp2
Pidd1
Gse1
Zfand6
Chka
Gucy1b2
Fgf7
Ccdc194
Spsb4
Slc35g3
Phactr1
Polr2a
Os9
Lrrc9
Gpcpd1
Fam181a
Gm6712
Mvd
Kctd14
Tmem219
Tm2d2
Adam9
Mterf1a
Jph1
Srsf11
Lrrc40
Dnajc16
Casp9
Ubxn6
Hdgfl2
Mettl15
Kif18a
Kcnmb2
Plekhg1
Acyp1
Cdiptos
Cdipt
Gpbp1
Glmp
Dhx8
Tmc5
Rps7
Fam149a
Lfng
Lpp
Trak1
Laptm4a
Sc5d
Vim
Rbm20
Nbdy
Atp1b4
Mbnl2
Map2k6
Ext2
Zc3hc1
Hnrnpul1
Asb4
Dct
Coq8a
4930402H24Rik
Phc2
Rest
Crb2
St7
Cenpu
Nat8
Kifc3
Riok3
Ints9
Hmbox1
Col12a1
Zfp65
Nlrp10
Eif3f
Cpa4
Zfp91
Lpxn
Mideas
Ubp1
Srp68
Psmc1
S1pr1
Zcchc7
Usp1
Parp10
BC107364
Ankhd1
Lrfn5
Eif3d
Mkrn3
Ankk1
Krtap3-3
Snrpd3
Gucd1
Ntn1
Kat7
Enpp3
Amt
Rpl22
E2f2
Amn1
Myh9
Dab2ip
Nup85
Tgfbr3l
Snapc2
Rps29
Elmo2
Phc1
Arsg
Lpar4
Adgra1
Dcn
Gdf10
Prkacb
Thada
Ric8b
Rufy3
Upk2
Fmn2
Rpl32
Bcl9
Lrrtm3
Lancl3
Ptrhd1
Cenpo
Gapdh
Agbl5
Gna13
Ednrb
Ybx1
Zfc3h1
Thap2
Cdkn1b
Phf12
Ube2h
Acaa2
Slc17a6
Arx
Pnn
Prkcq
Nvl
Tspan31
Alyref2
Mical3
Lin7c
Homer3
Trp53bp1
Cstf3
Scrn2
Ube2m
Chmp2a
Psmf1
Mad2l1
Sparcl1
Dchs2
Gm10710
Evi5l
Trafd1
9430015G10Rik
Rbms1
Th
Ctdp1
Fam166b
Fign
Rag1
Kmt2d
Cibar2
Ppip5k2
Gin1
Spats2l
Stc1
Tafa5
Ranbp3
Nxt1
Arhgef19
Slc9a5
Fhod1
Gas8
Dbndd1
Slc35e4
Usp31
Pmch
Cand1
Prkci
Zeb2
Ctnnb1
Gm5148
Kcnn3
Fgfbp3
Rab3ip
Mpp6
Add1
Chrm1
Kyat1
Card19
Tlx3
Tuba1a
Rrnad1
Isg20l2
Acss1
Zbtb38
Cdh8
Npepps
Rnf5
Agpat1
Trim2
Tnik
Bcl11b
Siah3
Cbx5
Mycn
Zfp605
Fxn
Gtpbp6
Akirin2
Tcp11
Tomt
Lamtor1
Tmem220
Tnks2
Nucks1
Clec11a
Ascc1
Anapc16
Alk
Sspn
Gpr84
Rgs20
Cipc
Zmynd8
Ccp110
Tdrd7
Dhx16
Smim19
Slc20a2
Lpin2
Hnrnph2
Gla
Mfap3l
Spink10
Fbxo38
H2az1
Atp6v1fnb
Atp6v1f
Rad51ap1
D6Wsu163e
Uprt
Serpinb1a
Gjb1
Aqp9
Rhoj
Cdk19
Etfb
Cldnd2
Pnkd
Fndc3b
Dcc
Nptx2
Cenpm
Usp15
Dnah3
Ezh2
Tmem159
Tle1
Grip1
Rgs8
Miga1
Esrp2
U2af2
Ccdc106
Spata7
Msantd4
Trmt112
Prdx5
A930009A15Rik
Tgfb3
Ift43
Wls
Sp9
Rhpn1
Psmd5
Cutal
Spry2
Tmem201
Mob1b
Zbtb18
Nolc1
Klf6
Mdga1
Zfp869
Sp2
Pan2
Ubxn4
Tcof1
Clrn1
Ptprg
Alpl
Ptma
Irgq
Cs
Pax6
Tagln3
Gpx8
Tbc1d9
Ddx19a
Plin3
Ttc9c
Hnrnpul2
Vps33b
Uvrag
Xrn2
Cnn3
Snapc5
Rbm6
Chd3
Slc4a2
Cdk5
Mpv17l2
Brsk2
Dnm3
Med16
Ipo5
Cnot1
Gpaa1
Exosc4
Cabcoco1
Pdzrn4
Mcf2l
Tbl1x
Mmp17
Hjurp
A730008H23Rik
Mtr
Sigmar1
Cdk5r2
Ints6
Sumf1
Supv3l1
Fam110b
Lman2
Naaa
2410004B18Rik
Poc1a
Oscar
Ndufa3
Glipr1l1
Jdp2
Vcam1
F8a
Sox12
Arhgef17
Chsy1
Sdccag8
Smim7
Nudt5
Cdc123
Sash1
Pemt
Ccnl2
Gabpb2
Erich1
Nacc2
Rps19
Ahctf1
Ccdc171
Bet1
Ltbp1
Cldn8
Hmga1b
Hmga1
Fyco1
Bend3
Cd24a
Tmed10
Poldip3
Ambra1
Itpr1
Armc8
Tube1
Fam229b
Galnt16
Ghrh
Edil3
H3c10
H2bc14
BC048507
Prpf4b
Tenm2
Rhof
Map4k4
Hip1
Kdm6b
Ankrd6
Rpl9
Lias
Oxr1
Pde1a
Ppp4r2
Lrrn1
Hspa9
Zzef1
Cyb5d2
Ttc25
Tnpo2
Gm715
Gm21885
Zcwpw1
Mepce
Strip1
Tcf3
Atrnl1
Celf4
Zfp354b
Uba1
Zfp46
Ttc32
Mtmr2
Vmac
Ndufa11
Frrs1
Tnrc6b
Mbtps2
Wdr6
Sntg2
Gripap1
Tulp2
Zfp955b
Shroom2
Kctd5
Nucb1
Prdm4