ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◣ HDAC4: STRING

CLDN2
MTRNR2L2
MTRNR2L8
SPATC1L
RGPD2
RGPD1
ADAMTSL1
SP2
MTRNR2L9
KATNB1
TNFRSF19
H4C15
H4C14
EVI5L
POLR3F
DZANK1
SSBP1
H4C3
SF3A3
MTRNR2L10
DNM2
RBBP5
PPP5D1
CALM3
HDAC9
CIC
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
TEPSIN
NDUFAF8
KHSRP
SCNM1
LYSMD1
DDX23
GBA
SP1
RFX1
YJU2
CLPB
TOP2A
MRPL24
PAFAH2
RPAIN
NUP88
BOD1
VPS50
HEPACAM2
BPNT1
EPS15
ALKBH7
UNK
H4C11
TACO1
INO80C
TMEM115
H4C12
CALCOCO1
INTS1
SYT7
PRR14
DDX49
COPE
CAPS2
KLLN
CCL3
CHMP4B
INTS10
HNRNPUL1
TCEA2
MYOM2
FEM1A
AURKAIP1
IFRD2
TBL1X
RWDD1
SF3B6
FAM228B
PHF12
H2BC4
TOMM40L
GSPT1
ARHGEF2
FBXL19
TSN
AP2S1
TRAPPC9
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H4C2
MAPKAPK5
LSG1
COMMD1
CCT4
ARHGEF1
NDUFS3
KBTBD4
RHOT2
SMARCD2
SELENOH
LARS1
OSBP
MTOR
GALM
PHB
NUF2
WDPCP
TSNAXIP1
THRAP3
RANBP10
MDH1
FAM168A
ZNF687
TSSC4
TJP3
BANP
PROSER3
HSPB6
DFFA
SIRT4
GPR108
ZC3H10
PRCC
MMACHC
CCDC163
RPS20
AK2
MDM2
ENPP4
CLIC5
PRRG2
NOSIP
PPRC1
ACTL6A
FAP
SSR3
NUDCD1
NCLN
CALR3
C19orf44
SUCLG1
LNPEP
ATP2C1
NEBL
KLF6
TMEM256
DHX8
ST3GAL2
HIKESHI
PWWP2A
ZFYVE1
SSBP2
HEXIM2
CCDC90B
TOM1L2
FUT10
DRC3
PAK1IP1
C6orf52
TSC2
RAP2B
PRDM15
NTHL1
CCL5
ANKHD1-EIF4EBP3
ANKHD1
TRIP4
ORMDL3
BABAM1
SMCO1
SLC25A25
NAIF1
CXCR5
MRPS18C
HELQ
TMEM208
RAB11B
LTN1
LRRC29
DPP9
RAB5B
PANK4
FLAD1
BMF
SPSB3
LRCH4
FBXO24
INVS
ERP44
PPP1R12B
ZNF17
SMPD3
COX16
CCDC146
UCKL1
MTRNR2L1
ILF2
IFTAP
COMMD9
XAB2
RPL27
VIPAS39
NCOA7
KANSL3
AHSA1
NDC80
METTL4
HNRNPC
ZNF417
SNX16
RPS3
TBC1D10B
MYLPF
PEMT
H4C4
PIGL
USP3
HRCT1
PES1
SP5
SKA2
PRR11
ING4
DRAP1
C11orf68
FSD2
C16orf91
BBX
KMT2C
HOOK1
PNKD
MED23
COMMD2
CCAR2
AAMP
STIP1
SLC35B1
NUP107
BUB1B
SLC33A1
PIN4
GATB
CMSS1
NDUFS7
KRR1
GPR137
EML2
ZNF268
MRPS23
LRRC14B
GCLC
NOP16
HIGD2A
FMO4
AQR
MNT
USP30
POLG
STX16
C2orf42
SRSF11
LRRC40
KHDC4
HSD11B1
CNIH4
SNX17
INSR
EIF2B4
ZFPL1
CDCA5
FAAP24
CEP89
ZNF140
SYMPK
FOXA3
TPST1
IFIT1
TP63
CCDC77
WBP1L
DDX41
COPS7A
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
C19orf53
WDR74
ELOC
ZNF451
WAPL
TMEM242
GALK2
COPS2
TYK2
PSMD4
KDSR
TLR5
TIMM22
SMARCE1
RAD51AP1
NR1H2
MPND
C12orf4
RPS7
RPL35A
PRPF18
NLK
IQCG
TUT1
SPTLC3
KIF16B
ZNF609
TTI2
MED27
INTS9
HMBOX1
EPRS1
E2F4
CCNL1
ZNF211
RPL32
CYCS
ZNF384
TFPT
RAP2A
PRPF31
CRB1
C16orf72
NEDD8-MDP1
NEDD8
KIF22
GMPR2
DYNC1I2
COPZ1
ARNTL
ZMYND8
RCAN1
RAD51AP2
NOC4L
DDX51
CRTC2
PPP6R1
MYCBP2
LTA4H
DMAC1
ZNF547
ZCCHC4
TRAPPC2B
RBM28
MTRF1
MFAP3L
ATP5MC2
TSC1
TDRKH
SCAF1
RAB40B
GFI1B
ZNF225
RABL2A
GTF2H4
DHX16
ZSWIM3
TMTC3
SEC11C
KLHL20
CLEC7A
CEP290
ACOT8
STK25
COX7C
ACBD4
UNC93B1
STOML2
SPHK2
RPL18
RANBP2
NUDT13
NDUFB5
MRPL47
HAX1
GUF1
GORAB
CYP2R1
SMARCAL1
NUCB1
ZNF165
UBQLN4
TLDC2
STAM
LAMTOR2
CAND1
TBP
SH3GL1
PSMB6
PSMB1
NDUFAF5
METTL26
ESF1
ZBTB45
WDR46
PSAP
PFDN6
ECT2
BUB3
ZCCHC8
VARS1
UBE2I
TOMM40
TFB2M
TCERG1
KCNN3
H4C5
EHF
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
CHD6
ZMAT2
VRK1
SMG8
RPS6KB2
METTL3
KMT2B
FCF1
AREL1
TOR1AIP1
PPP1R37
OAZ3
NUP205
MRPL9
KBTBD6
GPR89A
GOLPH3L
FAM207A
ADRM1
TIMM21
SHPK
PPP1R12C
PNPLA6
PLEKHM3
NSMCE3
ITGB1BP1
IFT27
FBXO15
EMC4
CTNS
CPSF3
ZBTB5
TMEM218
SLC35E2B
GTF3C3
CDC23
ARL1
TTC21A
LIN37
GSTO2
GORASP1
GABPB2
AP3S2
ANAPC5
ZNF628
TRDMT1
THOC6
PHB2
HEMK1
HCFC1R1
ZFYVE19
VWA5A
SOD1
NPRL2
MRPL28
DNAJC17
CYB561D2
C12orf43
ZSCAN22
ZNF605
SACM1L
KRT15
TBL3
NR6A1
MAPK14
UTP3
NCBP2AS2
NCBP2
MITD1
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
MRPL53
JMJD4
ABT1
RNF43
MICOS13
HSD11B1L
ZNF286A
UFD1
NFIB
MRPS15
DMAP1
CDC45
AHCYL2
ZMPSTE24
VPS25
UBR2
THADA
RPL37
NUCKS1
ISOC2
FRYL
CTU1
CDK5RAP2
CCDC61
POLR2J3
POLDIP3
FBXO8
CEP44
ATP5F1B
UBE2T
TAF3
NDUFAF1
GTF2H2C
GTF2H2C_2
DNAJC14
DCP1A
ATP5MG
ZNF383
ZNF337
PSMD11
LOC101927572
EIF4A3
DDX39B
CCNC
ALKBH6
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
ATG13
ZSCAN32
ZNF174
SEL1L
LY9
EIF4A2
RPL26
PDE12
LRRC45
CENPX
CCDC174
UBAC1
TPD52L2
TNFRSF17
PRICKLE4
NPIPB2
KAT7
INTS4
FRS3
ATP6V1G1
AP2M1
TDP2
TATDN3
RPS27
RER1
PEX3
NSL1
MORN1
GOSR2
FLT3LG
FARSB
ADAT2
ACOT13
TRAPPC6A
TLR4
FDXR
BLOC1S3
ZC3HC1
UFSP2
UCHL5
TRNAU1AP
TMEM94
TIPRL
RO60
KLHDC10
KDM4D
KAT6A
CWC15
RPL14
PSMD5
MLLT1
KNL1
KCNH1
RBSN
RABEP1
UTP11
TSACC
FBXO38
CCT3
C1orf159
RAB5C
RAB11A
EFTUD2
CRADD
CD2BP2
CCDC103
ZNF500
SPRY1
NMT1
GOT1
FASTKD1
DCAKD
ACTR1A
ZNF830
ZNF776
VPS72
TRAF3IP3
TIMMDC1
NOL6
MKNK2
MIS18A
GSK3A
G3BP1
CCT6B
AHCY
VPS26C
SLC39A3
SEC13
RPS23
DCAF7
ATP6AP1L
ALG10B
NMNAT1
LZIC
ATP5MC1
ZNF444
SMG6
SIRT2
NFKBIB
CLN3
ZSWIM4
SAMD4B
LOC645177
FBXO11
C12orf77
STT3A
SART3
PXMP4
KCTD5
ISCU
DSTYK
DLGAP1
CNOT1
VCPIP1
CASP8AP2
C8orf44-SGK3
ZC3H6
SYNGR4
SLX4IP
EPS8
SLC8A1
PDE6D
P4HB
NME1-NME2
NME1
NFATC2IP
MRPS17
DOLPP1
COPS7B
ATF7IP
TRMT10C
TRAPPC3
TMEM60
STK17A
SMAD3
POLR3E
PNN
PHTF2
NSUN4
MAP1LC3B2
KRT23
IGSF8
EXD2
COX7A2L
CCNI
XRCC4
TSNAX
TMEM167A
SETD1A
RFX5
PHF1
H4C9
TBC1D19
PRDM10
WDR24
TMEM259
RPL18A
NOTCH1
NIP7
HEXA
ETV5
COG8
BARHL1
ZNF143
THOC5
NRTN
NCKAP1L
LMAN2
FBXW11
PSMD3
REEP6
PRPF8
PIP5K1A
PCSK4
FBXO40
CDK5RAP3
TRAF7
SUPT7L
SLC4A1AP
RUVBL1
DOCK8
CYP19A1
API5
ANKRD39
TPGS1
RGS9
EXOC4
VEZT
TADA1
SNX15
MTMR9
FGD6
UFC1
SUPV3L1
SUGP1
RPIA
MED18
MAU2
LAX1
H4C8
CIAO2A
ACTR2
ZNF235
LRRC8A
KYAT1
CTDP1
HDGFL2
AP3B1
ZNF26
OAT
NELFB
MRPL27
HUS1
FAM117A
EME1
ZNHIT2
NR4A1
MRPL21
MRPL20
IGHMBP2
ATG5
ZNF420
TRUB2
COQ4
AP2A1
THAP1
RBM25
TMX2
SUDS3
RNF121
RBM42
PARP8
MRM3
MED19
LOC100133315
GLOD4
EIF3F
SUZ12
SCYL3
RGS1
FAM160A2
ZNF688
C1orf109
ZNF669
ZNF226
SRD5A1
SCRIB
MRPL1
ERCC1
KDM4B
EIF2AK3
TPRKB
ENSA
MARS1
CTNNB1
ARHGAP9
TMEM63C
PABPN1
GET3
DYNC2I2
USP48
TXNL4B
DHX38
RPL24
ERCC2
DUS3L
CCDC59
ING3
RPL21