ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975305 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◣ SRX5975305: 143B

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

KIF5C
MTRNR2L8
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
MRPL21
IGHMBP2
COL23A1
STMN3
RTEL1
SUGCT
MPLKIP
ZBTB45
SLC27A5
DPY19L4
TBC1D19
ACSF3
MTRNR2L1
CCDC97
STX16
USP30
DUX4
NME1-NME2
NME1
AAR2
ZMPSTE24
TMCO2
EIF1AD
CST6
BANF1
MTBP
MRPL13
CSTF2T
EMILIN2
UBE3B
ZDHHC6
VTI1A
OTUD7B
MAN2C1
VPS9D1
RAD54L2
CCDC57
STX18
PEMT
ZNF408
ARHGAP1
GOLGA3
RTTN
GTF2H2C
GTF2H2C_2
DUS1L
FEM1B
EIF3F
MED23
ENPP3
BMS1
WDR83OS
WDR83
MAN2B1
REXO4
ADAMTS13
NR1H3
ACP2
ISY1-RAB43
ISY1
SUPT7L
SLC4A1AP
EDC4
ITGB3BP
EFCAB7
RNF6
DCP1A
BBS1
MRPL44
TMED9
B4GALT7
SEC13
FRA10AC1
GTF2H2
NDUFS7
SLC35A3
NUPR2
CHCHD2
SLC33A1
NOL12
GTF3C5
TM9SF1
IPO4
TMEM41A
AFAP1
ZNF296
GEMIN7
TMEM262
ALKBH3
ZNF165
OR1F12
NUDCD3
SMG8
PTPRN2
SLC24A1
INTS14
VPS13B
NDUFS3
KBTBD4
FAM180B
DCAF10
ZNF561
WDR24
STUB1
JMJD8
MLEC
NDUFAF1
ADPRHL1
MAMDC2
PSMG3
INTS12
GSTCD
POLD1
NR1H2
HUS1
UBA5
ACAD11
TACO1
VPS52
RPS18
B3GALT4
CGGBP1
C3orf38
SCAND1
CCAR2
C8orf58
PDE6D
COPS7B
NDUFB3
FAM126B
USPL1
HMGB1
MRPL48
TTC4
PTPN21
DMAP1
RFXANK
BORCS8
ALG10B
CDK5RAP1
NOXA1
COX16
HEMK1
C3orf18
ZNF770
HDAC8
WDR11
WBP1
INO80B
MRPS31
NOL8
CENPP
ZSCAN22
TOP3B
MRPL1
RPS5
PHB2
PSD
FBXL15
STOML2
PIGO
FAM214B
PSMF1
RBBP5
NOP16
HIGD2A
TEDC1
CRIP1
TRIP4
PCLAF
RRP15
AURKAIP1
MRPS18C
HELQ
EXD2
C10orf88
TNPO3
NMNAT1
LZIC
FAM207A
MNAT1
COMMD2
METRN
HAGHL
CCDC78
ANTKMT
PIH1D2
NKAPD1
TVP23B
TIGD1
EIF4E2
SENP1
PFKM
SF3A3
MRPL40
HIRA
NSA2
GFM2
ZNF791
ZNF490
GTPBP3
ANO8
POLR3B
TMEM222
WNK4
VPS25
BLOC1S6
MRPL3
MKRN2OS
MKRN2
DSTYK
AP3S2
TEX38
ATPAF1
BCAT2
MTRNR2L9
SLC39A4
CPSF1
UTP3
ZNF391
C11orf49
GMEB2
DRG2
NDUFC2-KCTD14
NDUFC2
GTF3C3
C2orf66
MITD1
ZKSCAN8
ZNF302
CPPED1
WDR97
MAF1
CYC1
TATDN3
NSL1
FAM98B
MST1
GALK2
COPS2
SELENOH
MRPL16
AQR
ZNF205
SPAG8
HINT2
SNX16
TRMU
STARD3
PPP1R1B
LSG1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TSPAN10
NPLOC4
YBEY
MCM3AP
SNAP47
JMJD4
SLC39A13
THEM4
CYREN
FAM227B
DTWD1
VPS45
NSFL1C
MTOR
PEX3
ADAT2
TOR1AIP2
TOR1AIP1
YIPF2
TIMM29
SMG7
HNRNPA1L2
SLC25A53
FAM199X
TRUB2
COQ4
MEIG1
DCLRE1C
CLK3
THAP10
LRRC49
COQ3
RPL37
CARD6
PUS10
PEX13
AGK
OGFOD2
ARL6IP4
SNRPD3
GUCD1
BRF2
ZER1
PLEKHM3
FBXO22
TP53I3
SF3B6
FAM228B
MRPS22
METTL9
YIPF3
POLR1C
LRRC73
TEFM
C18orf21
TXN2
PDXK
TIMM9
KIAA0586
DDX1
TRDMT1
RUVBL1
EEFSEC
CFAP298-TCP10L
CFAP298
EIF2D
TMEM69
GPBP1L1
PCYT1A
RPS7
NUDT5
CDC123
NUF2
SSBP1
SLC44A1
MTIF2
MPHOSPH10
MCEE
TMEM101
TSEN15
VARS2
GTF2H4
SPSB3
NME3
MRPS34
EME2
SAR1B
RPL29
MARK3
STPG3
NELFB
FAM166A
FRG2
TUT1
MTA2
ALG10
NUP54
BSPRY
PPIL1
C6orf89
PIGL
NCOR1
PDCD6
WDR36
LTN1
RGS14
LMAN2
TDG
C12orf73
PROX2
SLC39A3
TMA16
PPIL3
NIF3L1
BANP
KLHL20
PCID2
CUL4A
ERI1
FAM118A
TBC1D13
LAS1L
TMEM242
RAG2
IFTAP
ZNF581
ZNF580
CCDC106
PLD4
DHX33
ZBTB11
RPL24
SEC22B
SREK1IP1
CWC27
OPRL1
CCNC
CACNG8
MRPL58
TTC26
MTRNR2L10
NXT2
SNRPB
GRPEL2
WDR25
WARS1
ZBTB33
ZNF207
C17orf75
PPIP5K2
GIN1
ANAPC5
MUC3A
ZNF461
ZNF195
RGS19
LKAAEAR1
FOLR1
PRRG2
NOSIP
INTS5
GANAB
DNAJC25-GNG10
DNAJC25
NAA20
METTL15
KIF18A
RFC4
FRG2C
C16orf46
ZNF562
TMEM68
TGS1
DNAJC24
DCDC1
MTMR9
GSTT2B
GSTT2
DDTL
DDT
ZC3HC1
YY1
MED18
EMC4
SEC11A
KCTD5
PHKA2
TYW1B
TSSC4
PTPRM
MAP2K5
VWA8
RAB18
MTRF1
LOC102724770
DGCR6
H2AX
DPAGT1
C2CD2L
ANKRD40
ERCC6L2
MRPL39
SRP19
KRR1
SLC25A21
TRAPPC10
YJU2
ZNF564
SIT1
ACBD6
SEPTIN4
MTMR4
SDHAF3
NKAP
LSM5
AVL9
ZNF846
ZNF410
CNPY3
ZSCAN12
NFKBIL1
DDX39B
ATP6V1G2
NEU3
OSGIN1
COA6
TIGD6
HMGXB3
PSMC2
DNAJC2
TM9SF3
MTHFD2L
TSPO
MCAT
DPP9
LIG4
ABHD13
GFM1
TYW1
SBDS
FAM168A
WDR74
STX5
RNF39
PPP1R11
POLR1H
UBIAD1
SMIM26
RBM28
SPCS1
GLT8D1
FBXW8
MFAP3
FAM114A2
SMIM19
SLC20A2
MBTPS2
DNAJB12
ZNF623
ZSCAN9
SPATA5L1
GATM
MRPL53
MOGS
EHD2
AP5Z1
CLOCK
CAP1
ZSCAN10
RSPH3
MTG1
LRRC58
TMEM30A
TUBGCP3
TMEM199
SEBOX
POLDIP2
PUM3
ZNF622
ATG5
PRORP
PPP2R3C
TMEM249
SLC52A2
FBXL6
AGO3
RPS20
UQCC1
KNSTRN
SH2B1
TUFM
ZBED9
FBXW11
GORASP2
TAF12
TDP2
ACOT13
TMEM128
EXOSC3
NVL
CBLL1
PRSS27
GPAA1
EXOSC4
USP21
UFC1
SNRNP200
ZNF549
TTC14
PTPN6
C12orf57
MAGEF1
EAPP
TTC23L
ZKSCAN4
NKAPL
ALDH3A2
PDCD2
MTR
CDC16
SLC22A18
CDKN1C
COPS4
ZNF596
C21orf91
METTL6
EAF1
TPD52L2
ABHD16B
LRRC24
C8orf82
SAMD1
MISP3
C19orf67
TXNDC9
EIF5B
PSMD6
PRKAB1
KIF22
PYURF
PIGY
HERC3
VIPAS39
AHSA1
PROSER1
NHLRC3
JRK
UNC50
COA5
PSME3
BECN1
SPDL1
STMP1
MSANTD2
CARD8
POC5
TMX3
CCDC102B
LCORL
ZNF668
ZNF646
TBX15
JAG2
RSL24D1
IPO7
DISP1
H3C13
H2BC18
MMP8
DCUN1D5
VRK1
DDX21
WDPCP
MDH1
PARP16
NUP153
NUP107
SEC16B
MKRN3
PDCD6IP
CCDC200
ZNF579
RPS4Y1
POLDIP3
OPA1
TEX9
RFX7
GABPA
ATP5PF
TMEM107
C8orf33
NSUN4
IPPK
ZNF558
ZNF570
ZNF569
ZNF696
PPID
NGB
PRR35
PIGQ
NHLRC4
ABCB9
USE1
DPH7
ECHDC1
C1orf198
CCDC152
FKBP3
FANCM
SIRT4
VIM
CSTF2
NDUFA12
VPS26C
LSM10
C4orf3
SDR39U1
SRSF7
MVB12A
NFIB
LRRC8A
KYAT1
VAMP2
PER1
EIF3D
GAS8
SLC35B2
HSP90AB1
SUGT1
SPAAR
HRCT1
NDRG1
KIF2C
SCRIB
PNPO
NIPBL
CRYAA
CRYAA2
ACSL3
STK3
FBXW2
INVS
ERP44
CD68
H4C12
H4C11
H2BC14
H2AC14
FIP1L1
ZBTB4
SLC35G6
POLR2A
RPL27A
SPATC1L
NCBP2AS2
NCBP2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
GTPBP6
SOX15
MPDU1
LOC100996842
EIF3H
KLHL9
PRPF18
SNRPD1
PRPF3
C8orf76
DDX18
ABRAXAS1
ETV5
SLF1
KIAA0825
ADAMTS9
RAD23A
GNG14
CALR
SLC35C2
ASMT
SRBD1
TOMM22
ATF6
ZDHHC21
TPRKB
GOSR2
RARS1
MANBAL
GPR137
NCAPD2
MRPL51
CCL3
PIGC
C1orf105
PSMD11
EFHC1
RPS27
RAB13
DBF4B
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
NOP2
SLC30A6
MTAP
WDR4
JOSD2
ASPDH
OSGEPL1
SPATA6L
PLPP6
LYPLA2
GALE
CHIC2
BBS10
CCNL1
ARL6IP1
CLTA
TANK
PRADC1
CCT7
EFR3A
SLC50A1
DPM3
PLEC
POLR1B
FOS
DDX19A
APEH
ETV4
APMAP
SARAF
LINGO1
HP1BP3
CCDC14
CCN2
RCC1
ZC3H10
RPL41
H2BC21
H2AC21
H2AC20
GOLPH3
ZNF101
ATP13A1
ZNF35
TTI2
ELAVL1
ZBTB40
RPS2
RNF151
TSSK6
NDUFA13
EIF4A3
CCDC22
CACNA1F
ARMC1
TSPOAP1
MRPL54
APBA3
SELENOK
KRTAP29-1
KRTAP17-1
KRTAP16-1
ACTR8
RHOT2
RHBDL1
RPS6
PABPC4
APTX
VPS53
GEMIN2
THEM6
EIF4G2
PRDX1
DPP8
MED1
CDK12
RREB1
DTD1
RXYLT1
PGAM5
MBNL1
ELMOD2
TMEM167B
DIS3L2
FUBP3
AZIN1
PSMA5
VPS36
LCMT2
CKAP2
ADAL
PIP4P1
SYNGAP1
FAM187A
EFTUD2
CUTA
CCDC103
WDR55
STAT1
DND1
TTLL12
EBNA1BP2
CFAP57
UTP23
H2BC15
H2AC15
NAA50
GLO1
ATP6V1A
PCIF1
ENPP4
CLIC5
ZCCHC7
DIAPH1
SPG11
PARP11
YRDC
PARP10
GRINA
C1orf122
SRSF2
MFSD11
JPT1
TUT7
GLI4
DHPS
DBNL
SLC34A3
RNF224
RNF208
CYSRT1
ZSCAN25
PARP2
CCNB1IP1
UQCC3
LBHD1
CSKMT
C11orf98
ARID4A
HSPBP1
EIF4A1
CALM1
BRSK1
PIP5KL1
PEX12
DPM2
AP2B1
PPAN-P2RY11
PPAN
P2RY11
INTS2
ANGPTL6
SLC3A2
SLC25A32
P4HB
DCAF13
ZNF3
COPS6
NFKBIZ
TTPAL
STYXL1
SCO1
ADPRM
NEK9
CTR9
POC1B-GALNT4
KIAA0100
GALNT4
H4C13
H3C11
H2AC16
H1-5
POLR2M
GBA
ERVH48-1
CAAP1
S100A10
TRIM4
TERF2
PDE4D
GJC3
EBAG9
CLCC1
GTF2H3
EIF2B1
STAU1
MCL1
DDX27
SMC4
IFT80
FOSL1
FIBP
CCDC85B
RMDN2
H1-2
YKT6
TRPV3
H4C9
H2BC11
H2AC11
TOMM5
ZNF669
TRAM2
SDAD1
MRPL24
HDGF
KAT6A
RGL2
PGGT1B
PFDN6
RPLP1
MFSD14A
PLRG1
ID1
EPN1
EIF2B5
LMNA
ZNF684
TFRC
RPL26
KRBA2
RFC2
CNBP
VMP1
PTRH2
L3HYPDH
KDM5A
JKAMP
CCDC77
WDR43
TIMMDC1
STK36