ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708085 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX4708037: Hep G2

◣ SRX4708085: K-562

◢ RBM39: STRING

WDR74
MTRNR2L2
MSH3
DHFR
POLDIP3
H4C2
H3C2
H2AC4
H1-2
CNOT3
H4C15
H4C14
MTRNR2L1
MTRNR2L8
TOP3B
H4C11
NPAS4
ADARB1
SIRT4
USP30
MBLAC1
FRG2
H4C3
H1-6
H2BC8
H2AC8
PRAME
DMAP1
CCNI
SRSF3
PTPN6
C12orf57
TMEM107
SRSF7
KMT2E
TMEM242
GBA
CCDC125
H2BC12
H2AC12
INTS12
GSTCD
TMEM167B
PAFAH2
PAXBP1
SF3A3
H2BC11
H2AC11
H4C12
PRDX1
ZBTB4
SLC35G6
POLR2A
H3C12
H2BC17
H2AC17
EEF1A1
EIF2B3
CALM2
DUX4
POLR3E
SEC22B
COL23A1
NASP
CRKL
NCOA7
EXOC2
MKRN3
PPP6R3
NGB
H4C5
EFHB
PUM1
TMC4
ZC3H10
RPL41
MRPS15
CCDC200
TUBA1C
RPL5
PBLD
HNRNPH3
WDR36
ZKSCAN8
RGPD2
RGPD1
SACM1L
GTF2IRD2B
HSP90AB1
TTC26
LIN28A
TNPO3
RBBP5
SLC25A51
DSTYK
KLHDC10
RPS27
RAB13
CTNNB1
SREK1IP1
CWC27
RBSN
FAM98B
RRP15
RPS12
HSPA1B
UBE2D3
TRAF7
PHF19
LACTB
PRMT5
TUBA1B
H3C15
H3C14
H2AC19
H2AC18
MAT2A
NDUFS7
BMS1
POLR2J3
NUF2
MTIF2
FUS
NXF1
RPL12
LRSAM1
INTS6
SHF
KANSL3
FER1L5
EIF4B
MTF2
BCR
RPL32
TOR1AIP2
TOR1AIP1
STX10
IER2
RPL15
NKIRAS1
SNRPB2
RAP1GAP
SUGCT
MPLKIP
SSBP1
BRF2
PCBP3
KDM8
STAT3
VILL
TATDN3
NSL1
COX16
H2BS1
TTI2
P4HA1
EGR1
ZC3HC1
COMP
AAR2
MRPS18B
H2BC21
H2AC21
H2AC20
EIF4A2
NFKBIL1
DDX39B
ATP6V1G2
LTF
MED23
TACO1
ZBTB37
RPS3
INO80C
GDF15
LTA4H
ST3GAL4
H2BC5
H1-4
CSDE1
H2AZ1
DNAJB14
CYCS
RBM28
FAM133B
LUC7L2
ITPR1
SNRNP35
HSPA6
CETP
MTRNR2L9
GTF2IRD2
UBE2L3
GTF2A1
PLEKHM3
KMT2D
KNL1
VPS52
RPS18
B3GALT4
CCAR2
C8orf58
SLC30A6
ACBD6
H3C4
H2BC7
H2AC7
TRUB2
COQ4
BRMS1
B4GAT1
NME1-NME2
NME1
DCLRE1B
AP4B1
HTR5A
BCAR3
ANGPTL4
RPLP0
NUP214
DRG2
RFXANK
BORCS8
PPIL2
MRPL44
GINS3
BNIP1
PPP6R1
RPS26
TBC1D19
SNX16
GTPBP6
RIF1
SDF2L1
OR2T1
SPDYC
H4C8
SRSF2
MFSD11
YARS1
S100PBP
TUBB4B
VPS72
DCTN6
ZNF391
NBPF1
CRB1
RXFP3
RTL10
GNB1L
POLR3B
TMEM259
CNN2
HMGA1
TRIP4
SLC24A1
INTS14
ATXN7L2
SNAI1
L1CAM
MRPS23
ZSCAN30
SSBP2
HSPA1L
HSPA1A
C8orf37
JPT1
EIF4G2
CCDC59
E2F6
GSTA4
SFPQ
RPS7
ASH1L
RPL7A
MED22
ZKSCAN4
RPS20
TSC1
GFI1B
RTBDN
ZNF253
SPATC1L
MRPL21
IGHMBP2
BBS1
UTP3
ZDHHC8
DCAF10
ZNFX1
TIMM17A
RPL24
IGLL5
RPL23A
RAB34
XKR7
FMC1-LUC7L2
FMC1
MAPK1
MTERF1
PNP
EIF1AD
BANF1
CPPED1
BRD2
DCT
ZNF280A
FRA10AC1
RPS24
POLR3A
RBMX
NDUFS3
KBTBD4
YTHDF2
PLXDC1
ILF2
CLTC
CCNC
BRK1
TRIM7
SLC34A1
FIBCD1
GTF2H2C
IPO4
GTF2H2
H2BC4
H2AC6
H2AC16
H1-5
PSMD5
RCOR3
KIF15
KIAA1143
H3C11
NSUN4
FUT7
C9orf139
ABCA2
IER5
CCDC116
ZNF385A
C11orf49
RPL10
RPSA
RAF1
TCTE3
ERMARD
RPL11
EIF1
NABP1
PPP2CB
AP3S2
ARID1A
TMEM101
GPN3
FAM216A
AMBRA1
STXBP3
RAB11A
THOC1
NECAP2
PARK7
NACA
POU2F1
TAF1D
C11orf54
SRSF1
MST1
NEK2
TRA2B
TSFM
AQR
EPS15
PTPRF
STX16
CCDC115
SUPT7L
SLC4A1AP
KANSL2
HTR3D
AIFM3
AARS2
TMEM267
ZMPSTE24
SELENOH
KNTC1
MYC
EPB41
MRPL39
CSKMT
C11orf98
RPL37
ARL15
POLG
TPR
ODR4
CKS2
TMEM209
SSMEM1
PLCD3
ACBD4
ATF4
H3C10
H2BC13
H2AC13
NFE2L2
PIGC
IMMP2L
ZNF747
KLHL20
C19orf12
GLUL
TMEM238
RPL28
PMF1-BGLAP
PMF1
STX18
TNFRSF21
MRPS33
HINT3
VPS13B
THADA
FOS
GTF2H4
DDX18
BTG1
PMPCB
FANCD2
SCCPDH
MGRN1
EIF2D
ZFP64
OLA1
LRIF1
SLFN12L
ERVH48-1
PSMD3
C12orf73
GABBR1
MRPL40
HIRA
FAN1
TMEM222
FOXJ3
PCGF2
RPS15A
STX6
C17orf75
PVRIG
SMG7
ST3GAL3
SLC39A3
TEFM
ZC3H15
PPIH
SNRPE
MRPL1
MAN2C1
ITGB3BP
EFCAB7
ADPRHL1
RPL38
RSPH6A
ZBTB20
COMT
DARS2
CENPL
RNPEP
RPS23
ATP6AP1L
RPL19
CACNB1
SAR1B
JUNB
GALK2
COPS2
SMIM5
CYP4F11
HNRNPA2B1
CBX3
CEBPE
H4C4
POP7
NDUFA9
LINGO1
AKAP3
RPL23
RPS8
ING3
SNRPF
MRPL48
WBP1
INO80B
PRR3
GNL1
MRPS18C
HELQ
NUP205
ZCWPW1
TJP3
MEPCE
FTL
NDUFAF1
LRGUK
GTF2H2C_2
LRRC37A3
CSAD
RPL34
H2BC15
H2AC15
RPL27
REXO4
ADAMTS13
ZNF429
SEPTIN5
GP1BB
RNF6
NPDC1
H4C9
RAET1G
VAMP4
HEXIM1
GART
NOP10
NUTM1
ACTB
CCDC90B
METTL1
EEF1AKMT3
CYP27B1
OBSL1
INHA
INTS7
DTL
BCL3
ZSCAN12
PDE11A
RBM45
KDM3A
APOM
BAG6
FZD1
TSPOAP1
YBX1
HOXC6
KDM5A
CCDC77
RBM17
HOXC5
DDX1
SPOCD1
ZNF843
ELAVL3
NBEAL2
CCDC12
H3C13
H2BC18
RTN4
NR1H3
ACP2
SLC12A5
TMA16
MAP3K7CL
CCT8
BPGM
RSRP1
ST7
ZWILCH
RPL4
MARCHF7
H2BC14
H2AC14
ALKBH3
MITD1
MLH1
EPM2AIP1
INTS5
CHEK1
SF3B3
COG4
ATP5F1B
ZNF92
PRRG2
NOSIP
ZEB2
MED18
DDR1
HNRNPAB
LZTR1
CRCP
FBXO8
CEP44
SIGLEC10
POLR2K
FBXO43
TEX9
RFX7
AGBL3
UCKL1
DDX21
ISOC2
HMGB2
MOB1B
GNA13
MTBP
MRPL13
NUDT5
CDC123
UBQLN3
PPIA
THAP9
SEC31A
BAIAP2
NUFIP2
TIPARP
CENPW
SLC27A4
TFAM
TAOK1
U2AF2
MRPL42
MRPS31
PRADC1
CCT7
GDAP1
DR1
LARS2
GOLGA3
KEAP1
RPS2
RNF151
SNRPB
METTL8
DCAF17
NFYC
SLC17A7
GMEB2
AIFM1
MTHFD2
ATR
NBN
C2CD5
AHCY
SND1
PHF10
OPRL1
LKAAEAR1
MEAF6
SWSAP1
PALB2
DCTN5
SMARCD2
TTC4
IFRD1
VARS2
YJU2
ZCCHC10
PCNT
C21orf58
ELAVL1
EBI3
CCDC88A
ZCCHC4
IARS1
FUT10
SLC33A1
SSR3
EEF1AKNMT
RBM48
PEX1
SLC6A9
RPL36A-HNRNPH2
RPL36A
BTK
SYVN1
PDLIM2
P2RX6
ACYP2
CCNG2
CCT2
TCAF2
NUP107
SPDL1
HFM1
ZNHIT3
RAB3GAP1
ZNF703
PLIN3
ERAL1
CALB1
MRPL16
SYT7
RREB1
GPANK1
C6orf47
PPM1D
BRIP1
ADNP
ADRM1
CSNK2B
ARL1
FFAR1
PEX3
ADAT2
ARL6IP1
C14orf93
TANK
PUS10
PEX13
PRMT3
DPP8
CNOT4
HDAC2
CCL1
RPL31
BRWD1
SMG9
NEU3
CEP85L
GNAI2
KPNB1
NDUFC2-KCTD14
NDUFC2
PCF11
SIRT5
REV3L
YWHAE
CYB5R4
PSMA1
DYNC2I1
CYRIB
NDUFS4
DHH
UNK
H3-3B
TSTD3
ZNF518A
TMEM168
EXD1
CHP1
DHX9
PSME3
DPP9
JUND
HNRNPA1
CBX5
PHLDB1
METTL26
ZNF56
SMCO1
PPM1F
MDGA1
GTF2B
SECISBP2L
RPS10-NUDT3
RPS10
DDX3X
POLR3D
MED15
GPR89A
RPL36AL
MGAT2
MUC1
CACYBP
SETDB1
SCG3
HAPLN2
H1-3
UBC
SNAPC5
PSMD14
CITED2
RAD54L
GMNN
NET1
HMGN4
RINT1
MTMR9
VWA7
CCDC71L
OSCAR
NDUFA3
SEMA6B
MRPL58
ERCC6L2
DUSP1
ZNF668
ZNF646
FBXO4
SMARCC2
BSDC1
RABGGTB
PITHD1
C6orf62
STAM2
SMIM12
PCBP2
RPL22L1
CHMP7
EEF2K
THAP7
SLC36A1
CLUAP1
C16orf90
ZNF839
ZNF408
ARHGAP1
MBTPS2
TXNRD2
IFNAR1
KCNA7
NPM1
PSMC3
TMEM87A
GANC
PRPF18
RPL6
PNPT1
CENPE
POU2F3
GABPB2
MTMR2
POLR1B
ULK4
GAL3ST3
NFIA
MSH4
HSPA5
ZNF76
SCGB1C2
VTA1
NMBR
PRDM7
ABT1
LSM5
AVL9
CCNL1
NEU1
BECN1
C12orf65
SNRPD1
ZNF25
TCP11L1
DHPS
POLB
NOL12
PKIB
SERINC1
CARD8
TRMT11
TFRC
RPL9
LIAS
ZNF184
TTC30B
TOMM5
ECHDC1
EIF3F
ZNF165
ADGRL1
PPIP5K2
GIN1
MZF1
GADD45B
JMJD7-PLA2G4B
JMJD7
HBG2
HBG1
ARMCX5-GPRASP2
ARMCX5
LAMTOR5
NIP7
COG8
JMJD1C
HEY1
DIO1
PIH1D2
NKAPD1
KLK2
TMBIM4
DPY30
SLC35F5
PPP1CC
PURB
MRPS36
TYW3
CRYZ
NSRP1
CTNND1
FAM53C
CDC25C
ZSCAN31
ZCCHC7
FOSL1
INTS2
NCDN
KIAA0319L
XRCC4
TMEM167A
MTF1
EEF1AKMT1
SCAND1
RPLP1
AJUBA
BIRC6
CENPC
PPIL4
NAT10
DTX4
SLC1A5
ZNF771
RGL2
PSMA5
SNX30
C3orf86
E2F3
PARP2
SLC35B1
METTL2A
MDM4
SLC29A3
METTL2B
BRAP
ACAD10
BRAF
PTCD2
MRPS27
SRRT
PGGT1B
H4C1
H3C1
H1-1
ZNF670
TMEM191C
TKT
NCAM2
PABPC1
HNRNPC
ZNF574
RPL22
CENPN
ARL4A
TRIM44
STOM
SNRPA
C19orf54
PDZK1IP1
WTAP
SOD2
RPL10A
U2SURP
GTPBP10
ACTRT3
SDHAF3
WAC
URB1
ZNF140
PPP1R37
DIDO1
PIGBOS1
PIGB
MEMO1
MMADHC
GID8
ZNF189
MRPL50
ZBTB7B
SMARCC1
ZNF576
IRGQ
ZNF791
ZNF490
ZNF107
SMG8
EGFLAM
BORCS6
H2AX
REXO5
ERI2
FBXW2
ZSCAN21
ZNF300
PRRC2A
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RBM4
FSCN1
PCLAF
CCDC174
STMN3
RTEL1
MECOM
FAM149B1
ECD
PACSIN2
TRAPPC3
COX7C
GLRA1
PDE4C