ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359919 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX768290: HT-29

◣ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L8
MTRNR2L2
RGPD2
RGPD1
CCDC59
CCT2
MAN2C1
H4C15
H4C14
IMP3
S100A13
CHTOP
MTRNR2L9
SLC3A2
NDUFS7
LRP6
SRCAP
LOC730183
TMEM179B
PRMT2
CZIB
TMEM248
DPP8
TTLL4
TBRG4
OIP5
NUSAP1
POLR3B
ATF7-NPFF
ATF7
NFYC
LARP1
MTRNR2L10
STEAP2
RTTN
CLK1
SF3A1
CCDC157
DCXR
ZSCAN22
SRSF7
USPL1
HMGB1
TMED1
PDCD2L
EIF4B
HSPBP1
AMACR
TMBIM6
CAAP1
SUPT7L
SLC4A1AP
STAMBPL1
SLC25A6
MBD4
IFT122
DCP1B
ZSCAN25
TP53I3
H2AX
CAPRIN2
NBPF1
UTP23
VPS37A
CNOT7
SPOP
DNAJB12
LMTK2
NDUFB3
FAM126B
NAGK
RSL24D1
SMIM15
SPTLC1
POLD1
PISD
UBE3B
ST3GAL3
SNX8
PDCD6IP
RPL5
WASHC4
SMIM10L1
PRH1-TAS2R14
EIF2D
SEMA4B
TTC14
RARG
TRIP4
UFC1
FAM227B
DTWD1
DDX41
TFDP1
VAMP4
CYP51A1
AP3S2
DENND4A
TOLLIP
POLR2J3
NDUFS3
KBTBD4
RBM28
C12orf66
MRPL53
RAD51
MPHOSPH10
MCEE
EIF3CL
EIF3C
TNPO3
KIAA1958
C9orf147
PNP
MTIF2
DSTYK
GPN2
AASDH
BAZ1B
ESYT2
STRAP
L3HYPDH
JKAMP
FBXO22
METTL1
EEF1AKMT3
THNSL1
POLG
HMGCR
XRCC6
DESI1
THG1L
ZNF408
ARHGAP1
PGBD2
ZNF687
STAT6
GNL2
TMED3
KTI12
GMNN
TAF10
LEO1
MRPL44
SLC52A3
SMDT1
TRIM59
DIABLO
AKAP9
PPM1D
MTPN
LUZP6
EIF3E
AKR1A1
XPR1
P2RY2
VAMP1
MRPL45
PDE4A
LUC7L2
TOR1AIP1
REX1BD
SF3A3
HUS1
PAFAH1B2
CUL5
XPOT
OGDH
SSBP1
TTC4
NBN
GOT2
PRC1
WDR6
STYXL1
PPFIA3
C19orf73
MRPS17
MFAP3
FAM114A2
MAP3K5
DUS3L
PRCP
DDIAS
KLHL12
NOP16
HIGD2A
C6orf226
RPS13
COX7C
GRPEL2
SAR1B
CYCS
MRPL1
SUGCT
MPLKIP
SNAPC5
TCAF1
ANO10
ABHD5
TSFM
MRPL48
ACYP2
SEPTIN2
HDLBP
PPP3CA
FNTB
NUP107
LARP4
MZF1
MGAT1
LSM5
H2BC5
UGGT1
STXBP3
AAAS
ITFG2
TLDC2
PSME3
H2AC19
H2AC18
SLC12A9
MEST
TARBP2
MED11
KRT18
ADPRS
NDUFB2
EDEM2
GTPBP3
HACD2
HEXA
GOLPH3
PPIL3
NIF3L1
BORCS7
ZNF394
FIGNL1
FBXL13
ARMC10
CCT5
ATPSCKMT
SCAMP1
SBDS
CDK5RAP1
SLC24A1
INTS14
ADAM15
TXN2
RAB27B
MRPL3
MYG1
HPS5
GTF2H1
NACA
FRMD3
ASNS
RAB19
ABCB8
ATP5MC2
H3C4
PTPA
CRAT
MMADHC
UROS
BCCIP
KANSL1
PPIP5K2
GIN1
SWSAP1
C12orf65
MRPL42
YEATS4
YARS2
COX14
PIK3R3
PMPCB
CEP83
PPIL2
MTRNR2L6
LRRC73
FUT11
DMAP1
LLGL2
MLF2
DHPS
ZNF391
RFC4
MRPS36
MAF1
TSSC4
TARS3
PLK3
VPS52
RPS18
DPY19L4
ZNF165
MCCC1
EIF3J
AGK
UNC13B
CHST12
NHLRC1
SEH1L
YTHDC1
BLOC1S2
ANO6
CBWD5
CBWD3
ATP5MF-PTCD1
ATP5MF
ITGB3BP
EFCAB7
SECISBP2
MALSU1
LTA4H
METTL7B
ZBTB45
HAGH
FAHD1
LRATD2
NDUFAF1
MRPS31
H4C5
AHCYL2
PLEKHM3
CCDC43
ELAC2
DCPS
C12orf57
PIGO
WDR4
TIPARP
LYSMD3
RAB5B
CBWD6
NRL
DCAF11
DCAF10
SLC25A28
BCDIN3D
TDG
CLUH
RPS27L
MCRS1
INTS2
POLR2J
TMBIM4
MBTPS2
CCDC97
RPS6
TPM3
GALT
BNIP2
TATDN3
NSL1
SNX17
EIF2B4
GARS1
SND1
TBC1D19
PAIP2
SRGAP1
DDX21
CNOT2
CHAC2
H3C15
H3C14
CASC3
PSMD9
HPD
SNRPE
GPR35
SLC25A21
ZNF212
MRM3
GLOD4
PDE7A
RNF111
HNRNPA1
CBX5
GHITM
NUP155
TRAF6
RAG1
FAM71E1
EMC10
ORC4
MBD5
TMEM251
MOAP1
IMMT
YY1AP1
DAP3
DDX46
TTC26
ZMPSTE24
BLOC1S6
ASCC3
TAF5
HNRNPU
CALU
CCNB2
PEX3
ADAT2
H4C4
GPN3
FAM216A
RAPGEF6
FAM120B
CFAP298-TCP10L
CFAP298
RBM6
GABPB1
BBS9
ACADVL
SLC11A2
B9D1
RNF14
SMPD1
KBTBD8
EID1
PCID2
CUL4A
MRPS35
NDUFAF2
ERCC8
FGFR4
SEC11A
MYLIP
UBE2K
TMEM87A
SIRT6
GANC
ANKRD24
POLR2J2
TMEM168
PDIA3
TPRA1
CHMP4A
MCM2
LPCAT4
THOC3
COX18
MBD1
TMCO6
TBK1
FIS1
SMARCAL1
SLMAP
FANCA
BMF
PSMC4
RRN3
PRKRIP1
ATG5
MTHFS
NPM1
NBPF12
PMF1-BGLAP
PMF1
AK2
TFPT
PRPF31
NUP214
PIGW
MYO19
RPS26
POLR2G
ZCWPW2
USP8
SLC25A13
FAM168A
AZI2
GET4
TRMO
CHCHD3
CCNC
ZNF250
ZNF561
SORD
CHMP7
CEP70
ATF2
COMMD1
CCT4
TOMM22
RTF1
FAM185A
SLC10A7
RPL28
RAD51AP1
C12orf4
FAM217B
TRUB2
COQ4
EIF4A3
ZNF770
FAM133B
USP30
MRPS18C
HELQ
WDR61
TRAPPC4
RPS25
PPP1R3D
PUS7L
IRAK4
PRPF8
NME1-NME2
NME1
PAAF1
COA4
GLCE
SRSF2
MFSD11
RINT1
WDHD1
STT3B
SOCS4
NARF
ERAP1
PCNP
ADIPOR2
TMEM209
PARP2
ADSL
SLF1
KIAA0825
INTS7
DTL
ARIH1
TFB1M
PIGF
GSTM4
CRIPT
BRF2
SCAND1
FANCD2
LRRC57
HAUS2
CDK4
ICE2
RPP25
NUTM2E
HECTD1
BPHL
STX18
NUP42
H4C8
GTPBP10
GOLGA3
RFC5
TRIM36
INO80
DNAJC19
CTSL
ANKRD13D
PCNA
SDHAF3
CRADD
DUS2
DDX28
NXT1
CETN3
MAD1L1
TRIM56
H3C13
H2BC4
H2AC6
RASA1
SLC25A17
OCIAD1
HCFC2
H2BC18
GLT8D2
BRMS1L
CNPY3
PPWD1
CENPK
WDR70
OTULIN
FGD4
NDUFB7
PARL
ATG4C
ZCWPW1
NAV1
MEPCE
EFHD1
ACY1
CCDC77
PSMD8
POP7
KDM5A
RASSF6
SUMF2
TMED5
NOP2
CCDC18
CAP1
AP2B1
IPP
RPS15A
FKBP9
NUDT15
ZDHHC17
TAF13
RPRD1A
PTPN23
NAT10
SEC31A
SMIM4
SCFD1
RPS3
SCAMP2
ZBTB49
LYAR
TRUB1
MAP4K5
CLSTN1
ATL1
PGAP2
CFAP43
KNL1
DYNC2I2
FOXJ3
KBTBD3
AASDHPPT
KAT7
PDIA4
COA1
SCYL3
CLDN4
CSDE1
TFRC
ZFC3H1
THAP2
NAA35
METTL8
ESR2
DCAF17
H2BC12
H2AC12
ZNF786
ZNF672
NOL7
SDHD
SPATA5L1
GATM
MVK
RIF1
CMTR2
TEDC2
RGL2
PFN1
DTD2
DHRS4
CCNT1
TMEM267
NOP14
GRK4
PA2G4
THBS4
MTX3
EXO1
SERINC4
PLD6
KITLG
HYPK
FBXW7
EXOSC10
SRSF11
NUTM1
NOP10
SRRT
RAB11A
PLPBP
YWHAE
THAP5
DNAJB9
STYK1
PPP2R5C
NAPRT
PMVK
PNPLA8
PPA2
EIF2S1
CENPS-CORT
CENPS
ATP6V1D
P4HA1
UNC50
COA5
SYNCRIP
PLEKHF2
TMEM106B
SLC1A3
POLB
PLPP5
LPAR5
KLHL18
KIF9
HSD17B4
C6orf136
SMG8
RPL6
PTPN11
MICU2
TIMM10B
ARFIP2
MRPL24
ZBTB6
NIPA2
NOL12
PCLO
PSMD7
L2HGDH
JMY
DMAC2L
ATP5F1A
ASH1L
MRPL16
AMD1
OGG1
ZNF740
CSAD
CEP135
PWP1
PRMT9
MIF
CDK19
ATG101
TMEM260
TET3
ZC3H10
TARS1
DPAGT1
CSE1L
USP48
SPRED1
TMEM116
TMED4
ERP29
ARHGAP18
OARD1
NFYA
GFM1
LEMD3
EIF4H
METTL2B
CTH
MAPK1IP1L
YWHAG
PBLD
HNRNPH3
C15orf61
LCMT2
ADAL
RPP21
TIMM13
RPL39L
GINS3
BCKDHB
ATAT1
APC
ANAPC10
ABCE1
PRR19
PAFAH1B3
ETNK1
MAP2K1
C11orf65
ILF3
DECR1
GPT2
SEC24A
SETD4
POLR2E
MBD6
EVI5
SLX1B
SLX1A
BOLA2B
BOLA2
ISG20
ADPGK
EPS8
UTP20
HEMK1
RAD52
SGK2
PRMT3
TXNRD1
RHBDD1
MRPS30
GTF3C4
DDX31
CHEK1
BCAT2
RNF13
IVD
SARNP
ORMDL2
IPO11
IPO8
OTUD7B
FEM1B
CCNI
TNFAIP8
VWA7
PGM2
FEM1C
EPRS1
CALCOCO2
CAD
BCLAF1
CDKN2AIPNL
ATR
POC5
CLPTM1
MAGEF1
PKP4
CCDC148
GPHN
POLE3
GLG1
C9orf43
PIF1
THAP10
LRRC49
SNUPN
LENG8
POLR2M
PPP5C
RSU1
NUP35
HNRNPA0
VPS39
SUB1
STARD9
ITGB1
ASCC1
ANAPC16
AGGF1
RBX1
EIF3M
TMEM138
CYB561A3
PSMD6
CEP120
L3MBTL2
SELENOT
SNX13
CDKN2B
TSTD3
ZFYVE27
SLC16A1
SARS1
METTL2A
MARS1
GDA
ERI1
ATP6V1F
ARHGAP9
RMI1
HNRNPK
ANAPC5
NFX1
UBOX5
FASTKD5
NDUFA5
YKT6
PSMD14
UMAD1
TCAF2
SNRNP35
LACC1
CCDC122
MACROD1
NDUFA2
IK
RPLP1
NEK1
SKAP2
NUBP1
CDK18
WDR74
SIRT4
TMEM217
TBC1D22B
FDXACB1
C11orf1
COX5A
BSDC1
ABRAXAS1
TBC1D5
SF3A2
PPRC1
PLEKHJ1
PGLS
H3C7
AGO3
ENSA
TRAFD1
BNIP1
FTL
ARL4A
NDUFA12
SLC35A4
APBB3
JAK2
CRCP
MINDY2
WWTR1
PPP2CA
GLIS2
DRG1
TPST1
SPNS1
C7orf25
FAU
AGL
CS
EMC4
CCDC107
RRP7A
RAB10
PEF1
VPS13B
JMJD7-PLA2G4B
JMJD7
SMYD5
ERCC6
CNDP2
ATAD1
USP15
NR1H3
ACP2
FAM98B
RETSAT
CCNDBP1
RPL22L1
MTLN
SLC19A2
STK19
DXO
ERCC6L2
MAPK1
ZNF596
SIRT5
GSTK1
CYB5R3
UBE2B
CDKL3
H4C12
STAT1
MARCHF3
SLC6A6
RPUSD2
BRIX1
CCDC90B
ZFYVE19
DNAJC17
TMEM175
GAK
KRBA2
DPH1
MYH7B
GSS
ZNF624
TCTA
SERF2
RHOA
MOCS2
MFSD5
MEAF6
MCCC2
LOC114841035
LMAN1
HERC1
FKBP2
CUTC
COX15
C16orf46
TEFM
QTRT1
NECAP1
TBC1D22A
R3HDM2
NDUFA6
CUL7
NCK1
PDE4D
HELB
HEATR5A
DDX50
RPL22
MRPS15
CLTC