ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3585704 | Lung fibroblasts
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX2765964: HUVEC

◣ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
USP31
RAD51AP2
METTL3
MTRNR2L8
CCDC88A
NSA2
GFM2
HSPE1-MOB4
HSPE1
HSPD1
CRH
CCNT2
GTF2H4
MRPL28
LSM6
C7orf25
LCORL
TANK
DARS2
CENPL
NOTCH2NLC
MED23
DLAT
YIPF5
KCTD16
MRPL48
EIF2D
ATE1
NBPF1
PLK4
ATL1
MRPS30
EID1
COX18
LYNX1-SLURP2
LYNX1
NBN
LOC389831
KCNJ2
ITGB3BP
EFCAB7
EFHD1
FANCF
SAXO1
RRAGA
TMEM71
PHF20L1
STK17A
NOTCH2
PHF3
RNPC3
GPR89A
VRK2
TTC21B
COG6
MRPL42
LDHB
DTWD2
UFM1
TMA16
FRA10AC1
NFE2L2
PIP4P2
FEM1C
CLN3
CEP85L
MTIF3
ZNF250
AGBL3
PHIP
POLR2M
SPEF2
ANAPC10
ABCE1
IKZF2
RPGRIP1L
MFAP3
FTO
FAM114A2
AP3B2
AFF1
IL18R1
SCOC
BBS10
ABCD3
NDUFAF1
CAP2
SPATA17
GPATCH2
MPHOSPH6
ZNF891
ZNF10
USP30
SLC30A9
ZNF32
WDR3
GDAP2
DBR1
BET1
COBLL1
LCA5
DCP1A
CETN3
WDR35
CMTM6
UFL1
ATR
NSFL1C
C8orf88
TPR
ORC4
ODR4
MRPL10
MBD5
LRRC46
KRR1
CBWD5
CBWD3
CDK8
TCAF1
IRAK1BP1
CC2D2B
CNOT4
CLDN12
WDPCP
MDH1
PDCD2
SNRPD1
ZNF93
ZNF780A
SUGCT
PFKM
MTF2
MPLKIP
FOXO3B
CCDC178
FBXW4
NBPF3
GINS3
REL
SNX15
ZNF214
SULT6B1
SELENOT
NLRP14
CEBPZOS
TMEM106B
PDCD6IP
TMEM260
HEMK1
DNAH2
CTR9
DHRS7
WDR11
C10orf88
DECR1
USP15
FAM227B
DTWD1
DSCC1
LAMA2
CCDC59
SLC25A40
DBF4
BLOC1S6
DERL1
C12orf66
TSN
ALG10
PTX3
ACER3
CSTF2T
DHX36
KDM8
RNF146
FAM126A
CREBZF
MRPL39
DNAJC3
ZNF670
GLIPR1L2
GAP43
DOP1A
GHR
TTC30A
ZCCHC7
SOAT1
PUS10
PEX13
KLHL20
SLC39A10
HLCS
RNF150
SNRPF
MRPS28
DDX60
CDKN2B
GTF2B
USP45
GLCE
ITPRID2
H4C11
PCBP2
HEPACAM2
MRPL44
GPC6
VPS50
SYNGR4
NRAS
GNPDA2
TNPO1
NCOA7
PRPF38B
VPS41
PDGFD
BAZ2B
SUPT7L
SLC4A1AP
RBIS
MTRNR2L2
RICTOR
RPSA
CCT2
STX18
MAP9
FNTB
ASCC3
BCAP29
TMED7-TICAM2
TMED7
PINX1
TAP2
FEM1A
ZNF675
CBR1
ZMPSTE24
SYT1
LRRC57
IFTAP
HAUS2
ARHGAP28
ATP9B
NAE1
PRPF18
SERPINI1
PDCD10
LTA4H
RC3H1
TANC2
GUCY1A1
CCNG2
C8orf37
C21orf91
TMED5
CCDC18
KIFAP3
MPHOSPH10
MCEE
ZSWIM2
VPS45
TMBIM4
NMI
MRPL1
DEPDC1B
PEMT
KBTBD8
H1-3
CDC27
WBP11
PCNX4
INTS12
GSTCD
C12orf60
ARL6
HENMT1
AHCTF1
SESN1
AGK
SRRD
HPS4
SCRN3
CIR1
SLC25A36
DENND1B
ANKRD36B
PAXBP1
GNAL
RTRAF
SS18
PPIC
TMX1
ZSCAN25
ULK4
RBBP9
NPM1
INVS
ERP44
ANKRD46
VWA8
C2orf69
TOX4
TBCK
RFT1
RAB2B
AIMP1
RUFY2
NT5DC1
TMEM43
CHCHD4
ANKRD36C
SWAP70
TMEM38B
FH
PPIP5K2
GIN1
ZNF165
UMAD1
SENP1
CHAMP1
HMGB1
SVIP
GDAP1
MPP5
ZNF510
USPL1
RAB3C
GATB
ATP10D
STX7
LAMTOR3
TUSC1
ZNF91
FAM217B
BLOC1S5
SYCP2
TRIQK
RPS15A
RBM8A
ODF2L
MXD1
MTFR1
KATNBL1
RAP1GDS1
HSF2
HMGB2
RBM45
UAP1
USP47
ZCCHC4
CNOT2
CCNC
IRAK3
B3GALT1
POP7
TRA2B
KDM5A
CCDC77
RPS6KC1
NBPF15
SFR1
FIS1
VEZT
FGD6
ACYP2
MTMR6
CGRRF1
CAT
C18orf21
ZNF614
ZNF205
TMEM242
SREK1IP1
RAB27B
GPN3
GLYATL1
FAM216A
CWC27
BZW1
WDR87
SIPA1L3
ZBTB14
NSUN6
ZNF391
SMARCA5
AADAT
ZNF326
WDR36
SNRPD3
ITGA4
GUCD1
RGS2
ZW10
TTC26
SCYL2
SCLT1
PSMD14
NPRL3
HEATR5B
GPATCH11
GNG11
DEPDC4
COX7C
C4orf33
PCSK5
SPRED1
PLPP1
FAM174A
CUL5
MANEA
ELMOD2
SLF1
KIAA0825
NET1
KANSL2
WDHD1
USP32
TCTEX1D1
SOCS4
SLC9B2
SCGB1C2
NCOA4
FAM110B
CTH
SENP6
RFC3
ZNF43
ZFC3H1
THAP2
EXOC5
AP5M1
HSD17B4
GUF1
NUP54
PTCD2
NUP35
NEK1
MRPS27
EEF1AKMT1
CHD8
C14orf39
ACVR2A
RAB11FIP2
SH3GLB1
HSCB
CHEK2
TNPO3
ZNF709
ULBP1
TSGA10
RPL21
REXO5
LRPAP1
IFNAR1
ERI2
COPB1
C2orf15
BIRC2
APOL2
PREP
RANBP17
ZFP1
FBH1
ANKRD16
C5orf51
ETFDH
C4orf46
VCPIP1
C8orf44-SGK3
ZNF74
TMTC3
METTL16
GHITM
CEP290
WAC
SNX12
PLEKHA5
NKAIN2
STEAP1B
COG3
CENPC
TUBE1
FAM229B
RSPH4A
NUP58
CAND1
ZNF649
TMLHE
SPRY3
SLFN11
RABL3
POLR3E
OTUD6B
NCEH1
GTF2E1
CPLX2
BTBD10
UBE2E2
ZBTB20
TMTC1
TMEM248
CDCA7
RABGAP1L
CUL2
THBS4
MTX3
DTD2
TANGO6
PGM2L1
IFT74
ZNF518A
ZNF330
USP40
TMEM168
RPS7
TEFM
ZNF286A
KPNA5
ERICH2
XPR1
PEX3
ADAT2
ZC3H14
ZNF736
VTA1
NMBR
GPR37
CFTR
CEP128
AQR
ANAPC5
NUDT4B
ADGRL1
MPPE1
ZNF782
PSMA1
ZNF624
USP16
TSPAN12
SEMA3A
PNISR
NACA
GFM1
CDK5RAP2
ITGAV
PRRC2B
TNKS
C1orf56
KLHL7
RAB8B
USP38
ZFYVE16
PGBD1
NAP1L1
DNAJC19
NUDT4
TRAK2
STRADB
PTBP2
PLEKHA8
SPR
TLK1
MKLN1
TFAM
SARAF
STX17
PELO
ITGA1
NAA16
MTRF1
SLC2A12
ZNF343
ZKSCAN7
TMCO1
PCCA
DNAJC24
DCDC1
CEP57L1
C2orf73
THSD7A
AKAP12
SNX2
SLC30A1
ZNF76
SLC25A24
PDCD5
PAM
SRI
SUCLG2
GTPBP10
AGGF1
ZNF92
PTDSS1
MTERF3
BMT2
WDR61
SIKE1
PRPF8
OCIAD1
IFI27L2
EIF5A2
ALKBH3
PRKCQ
MTHFD2L
RNF19B
CASD1
TSEN15
TMCO4
TMEM17
CFAP299
COMMD10
MTRR
FASTKD3
LDB2
GLUL
NDUFS3
KBTBD4
ZNF491
ZNF227
RPS4X
GCFC2
CEP83
ADAMTS3
GRAMD1C
HECTD1
ITPR2
MKRN2
ERV3-1-ZNF117
ERV3-1
ZNF708
MIS18A
RWDD1
COQ3
CCDC66
CCNA2
ZNF780B
ZNF45
ZNF322
ZNF300
ZNF17
RPUSD4
PRRC2C
MTIF2
MMUT
MED30
MBIP
HERC4
FAM118B
CENPQ
CCSER2
TMX4
PROS1
PDIK1L
MIA3
FAIM
MINPP1
HIF1A
GPR89B
TUBGCP3
DCAF10
QTRT2
CCDC191
CHAC2
EPHA3
HEXA
FBXW7
SLC25A27
CYP39A1
TP53I3
ZC3H15
CLCN3
CAMLG
ACOX3
SYT7
RUNX1T1
SRSF7
ANKRD17
SLC25A21
KBTBD3
AASDHPPT
RELCH
PIGN
RPL27A
FAM76B
CEP57
DLG2
FANCL
GOT2
CNTLN
ASNS
THUMPD1
NANS
HIKESHI
UTP15
TNFRSF19
TMEM126B
THAP5
PBLD
PALLD
NHLRC2
MRPL16
LIN7A
LHFPL6
HNRNPH3
GTF2H2C
GTF2H2
DNAJB9
DCLRE1A
CEP164
ANKRA2
AFG1L
CTNNB1
SSH2
MAP3K1
AKAP5
CCDC93
TTC39B
H2BC18
H3C13
RBM12B
SUCO
RNF7
CYP51A1
ZNF471
ZNF461
ZNF202
USP54
TTC33
RAET1G
PPWD1
KCNK12
INTS10
ICA1L
GORAB
CMSS1
CENPK
ACP6
MCU
POGLUT3
SRGAP1
DLC1
KCNH1
UBQLN1
PGM1
ING3
PRMT6
RAB28
ZNF253
TADA1
ZNF714
FNIP1
COMMD8
DMXL2
ZSCAN12
ZNF470
ZNF37A
SPNS1
SPATA13
SLC37A3
RBBP5
PIAS1
GRIK2
FXR1
CHIC1
CFAP20
CEP70
H2AZ2
NUTM2E
ABR
NAPEPLD
RC3H2
L3HYPDH
JKAMP
ZSCAN9
ZSCAN31
ZNF628
ZCWPW2
TMEM217
TBC1D22B
RMDN2
GOSR1
GBA
CRADD
AZI2
ATF7IP
KANSL1L
HMGN1
ERAP1
RPL7
RDH10
THAP9
SEC31A
FAM135A
TOMM5
FAM214A
IQCH
AAGAB
CCDC7
ETNK1
YWHAG
DEPDC1
IL12A
COA6
TOGARAM1
KLHL28
YY1AP1
DAP3
NBPF12
SMAP2
GUCY1B1
CEP55
ZSCAN5A
ZNF25
STAMBPL1
PPP1R12A
NHEJ1
NEMF
LSM10
CRISPLD1
CBR4
ST7
SOX5
RAD52
PHACTR2
PHTF1
SEH1L
LOC100289561
MTMR2
NFRKB
PDE12
MTX2
ZNF441
TXNL4B
TIMMDC1
SYT3
RPL32
PAFAH2
IL15
DZIP3
DYNC1I2
DHX38
CIP2A
CBWD6
CACNB2
C2orf42
C12orf57
TRPS1
SKP1
UBE2D1
CAPRIN2
PHF10
FAM162A
CCDC58
ARL13B
ZNF429
ANKRD18B
RNLS
WDR77
ATP5PB
AASS
CEP120
RNF182
ZNF35
TRIM16L
TATDN3
STAT6
RNF111
PIMREG
PCTP
NSL1
NRXN3
JMJD7-PLA2G4B
JMJD7
HNRNPA3
CLTC
CFAP69
NUDT3
ELAC1
BLMH
MARCHF7
GCA
ANKRD36
LRRC6
SRSF6
ABI1
DNAH14
HSD17B12
PIGK
ANKRD42
KITLG
TMBIM6
DELE1
VWA5A
SLC25A30
SCN3B
SC5D
RFX5
PCOTH
MRPL3
MMS22L
MIPEP
LXN
LRP2BP
FAM222B
CRYM
CRB1
CCDC83
ANKRD37
ALDH7A1
MSRA
RNF103-CHMP3
RMND5A
CLSPN
C1orf53
IQSEC3
WASHC4
EIF3E
ICE2
PDE3B
RIF1
NEIL3
ZSCAN22
ZNF24
TDRKH
TASP1
SMIM10L1
SLC35B1
RPL37
RCOR3
PRH1-TAS2R14
NPL
LUC7L2
LARS1
FMC1-LUC7L2
FMC1
FASTKD1
FARSB
EXD1
CHP1
ANP32E
JMJD1C
ATL2
RNF135
LRRC37A3
STX11
CNOT6L
MACIR
EPS8
PDXDC1
ZNF254
PDE7A
HINT3
ZNF830
CCT6B
ACAT1
CCN3
EPB41L5
SSPN
ADSS2
KBTBD7
DSTYK
MRPL58
PSTK
ZNF354C
ZFYVE19
YAE1
VPS13B
TCHP
NHSL1
MINDY4
MICU2
DUS2
DNAJC17
DDX28
ATF2
ANTXR2
ACTR6
IQSEC1
TECPR2
CINP
DESI2
LANCL2
SMNDC1
ZNF720
B3GALNT1
ADH5
ZNF823
IFRD1
PPM1L
TRAM1L1
ZRANB2
TFDP2
UEVLD
ZNF222
TFPI2
TAP1
SSBP1
SLC10A7
RTTN
PSMB9