ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
ADNP
TRIM3
POLR3B
MTRNR2L8
MTRNR2L2
MSH3
DHFR
PLCB4
RTBDN
MAST1
BMP7
ARL14EP
REXO4
ADAMTS13
MZB1
SLC23A1
MYADM
C9orf152
CCDC59
MRPL44
MOB4
ERGIC1
S100A16
PSMD6
AFF4
ARHGAP40
PCCA
SPRYD3
KRT18
EXOC2
GNPNAT1
STX16
TACO1
CUEDC1
NOL11
COL23A1
ZNF500
MUC5B
TMEM87B
TTC39A
UCHL5
RO60
ZNF609
CNOT3
PMEPA1
BAZ2A
BCL3
PAQR4
KREMEN2
SCAMP1
SMG8
FAM221A
N4BP3
PLEKHG2
KMT2C
INKA2
DDX20
ARHGAP39
GNAQ
IQANK1
FAM83H
ALG8
ZNF217
FAM20B
USPL1
HMGB1
SKA2
PRR11
SNAP29
PI4KA
TOP3A
SMCR8
DNAJC10
LDAH
MED23
MADD
GGPS1
ARID4B
REPS1
ZG16B
EIF1AD
BANF1
HIPK1
ZMYND8
DYNC1LI1
NOTCH2
GTPBP6
FAM207A
TPD52
EMB
NOTCH2NLA
REXO5
ERI2
BLOC1S5
EED
SEC16A
C9orf163
VPS13B
PSMB7
FLNA
CYRIB
BCAS2
ZNF860
OSBPL10
GRK6
EDN1
NDUFS3
KBTBD4
KANSL3
FER1L5
SNRPB2
MLPH
ZNF408
ARHGAP1
USP32
FAM227B
DTWD1
BCAS4
IPPK
SCARB2
FAM47E
MARCHF7
NQO1
ATP5MC2
ZC3HC1
DUSP6
DSTYK
RPS7
DPY19L4
RBBP5
SLC25A36
SLC34A3
RNF224
ZNF518A
LEMD2
CPNE8
NOTCH2NLC
ECT2
TBC1D30
TRIM37
MTRNR2L1
RBSN
TMEM199
POLDIP2
SMIM14
PPM1H
LSG1
ID1
CYREN
INTS12
GSTCD
FRG2
CEP63
ANAPC13
NOTCH2NLB
CHD8
WDR11
MEF2A
WDR97
PHF14
MAF1
DCAF10
PPIP5K1
CKMT1B
USP38
TAFA3
RUSC1
PPM1J
PLA2G15
CARMIL1
MRPL1
GSE1
SCYL3
APPBP2
TRIM33
TMEM210
LRRC26
TOR1AIP2
TOR1AIP1
NOXA1
LUC7L2
TMEM183A
PMVK
DUX4
SPOP
NECTIN1
TFF3
AP1M1
PMPCB
DEDD
CXXC5
USP9X
NEK5
AP3B1
UNK
H3-3B
H2BC21
H2AC21
H2AC20
OTUD7B
UST
RPL37
AP3S2
TEX14
RAD51C
DNAJC25-GNG10
DNAJC25
ARL8B
EEF2K
STMN3
RTEL1
TTC6
FOXA1
PCYT1A
SULF2
TLNRD1
BCAS3
SLC39A6
ZBED8
MICA
GABPB1
IFRD1
ADPRHL1
ATAD2
SLC33A1
FFAR2
TOP3B
CPOX
SYNGR2
MMADHC
UTP25
PPIP5K2
GNPDA2
GIN1
ZNF410
SCNM1
LYSMD1
INTS2
BRINP3
ALG10
SETD9
PDE8A
PGK1
CNBP
BRIP1
ALG10B
TSEN54
SPHK2
RPL18
FAM83E
CASKIN2
LRP6
TRIB1
CIAO3
DDX59
MUC2
ZNF197
ZFP62
TBPL1
KRR1
ZBTB7B
TPTE
SWSAP1
NUP54
NRAS
GSPT1
ATR
DGKA
PLXNB2
LNPEP
PPM1D
SRSF7
CLTC
RASEF
KIF26A
TRIP4
NPM1
EGR1
MRPS33
PPP2R5E
PDS5A
LINS1
ASB7
PSMC5
FTSJ3
SNRPB
NCOA3
ZNF446
GOLGB1
VMP1
PTRH2
CRNKL1
CFAP61
TANC2
LSM5
AVL9
KMT2D
AHCYL1
TPD52L2
PTPRN2
BZW1
ABHD16B
SLC24A1
INTS14
SGPP1
HNRNPA2B1
CBX3
ATXN2
SF3A3
ZFYVE9
B3GAT2
ERCC6L2
ZC3H10
RPL41
OSER1
PIGC
SLC35A1
RPL12
LRSAM1
HMG20B
TUBD1
RPS6KB1
RAB1B
METTL2A
GABPB2
RPS29
HES1
OPRL1
LKAAEAR1
VCAN
ZMPSTE24
KCNH8
TPK1
WWP1
ARFGEF2
DCLRE1B
AP4B1
RNFT1
ZDHHC1
ZNF655
TRIB3
CST3
CST4
KMT5A
SYT5
DMTF1
SLC16A5
MISP3
CST1
RPL32
DPF1
POLR3F
DZANK1
RAPGEF6
RPS26
SLC25A40
DBF4
ANAPC15
SPTBN4
BLVRB
SNX1
CIAO2A
CYBC1
PHC2
GORAB
NKX2-8
SGO2
ODC1
MTOR
CD63
C6orf89
TNS4
ZFP37
COX6B1
SLC1A5
EMSY
CCDC97
UBE2K
NAPSA
BCL2L13
RMND1
ARMT1
HARS2
HARS1
WDR55
SLC51B
TRIM59
ZNF106
SNAP23
ASNSD1
ASDURF
ZNF576
IRGQ
TEP1
RPEL1
RAC3
CCPG1
C15orf65
SDHA
CCDC127
TPCN1
AP2S1
GLYATL1
EIF4A2
C3orf35
IMPA1
RPS6KB2
MDFI
SCIMP
ING4
PRORP
PPP2R3C
ESM1
RUVBL1
FLYWCH2
TTC9B
FAM72C
UEVLD
B3GNT2
ACY1
PSMD14
RABEPK
ZNF335
ZHX3
TEN1
MPEG1
ACOX1
CLDN23
SRGAP2B
FAM72D
MON1B
COMMD1
CCT4
UBR7
GON7
FUT10
FRG2C
ACTN4
PARD6B
METTL3
BHLHA9
ZNF546
GRPEL2
TSC2
NTHL1
NME6
TNNI3
TBATA
NOS1AP
UBL7
RPS16
PFKP
SRGAP2
FAM72A
RIC3
CCDC61
NUDCD3
RARA
ZNF512
GTSE1
DHX8
VAMP2
NACA2
MAPK13
NEU2
ETFA
GJC3
CEACAM3
SDSL
EYA3
TMEM251
MOAP1
SCAND1
SH3PXD2A
TRIM11
TTC14
CFAP58
SPOPL
MAMDC2
SLC25A32
DCAF13
SFTPB
RGPD2
RGPD1
SHKBP1
SLBP
MYEOV
KMT2A
VPS26A
TIPRL
EIF2AK1
KATNIP
GTF3C1
RAD51AP1
C12orf4
PDE11A
TVP23B
LOC389831
FNBP4
PRKAB1
RPH3AL
NFKBIZ
RAPGEF3
PLAUR
F2RL1
TKFC
SECISBP2
EXOSC5
DDB1
BCKDHA
TRIM35
PTK2B
CLDN2
LSM12
G6PC3
EIF2S1
ATP6V1D
PTER
PLA2R1
PDAP1
NPDC1
BUD31
RWDD1
TMTC3
TAT
KCNAB3
CNTROB
CEP290
SAPCD2
ADORA2B
SPAG9
TMEM51
THEM4
SRP19
SNRPA
RNF181
C19orf54
UBE2L3
RIMBP3C
RIMBP3B
PRRC2B
ZNF165
SRGAP2C
FAM72B
SEC22B
RBM19
RALGPS1
DPM2
CALR
ALOXE3
SPEF1
PCM1
EIF4B
PMP22
MRPL33
CSDE1
BIN2
STAM2
PGBD4
FAM178B
EMC7
TMEM87A
GANC
FUT4
COA6
VAC14
DISP1
C3orf14
ARG2
CCDC22
CACNA1F
C9orf64
SLC25A53
UNC45A
RHOBTB2
HDDC3
TMEM216
SOAT1
RPS19
PRKAG3
ALDH3A1
HDAC8
RNF6
ARL13B
PPP6R1
MID1
LIN54
MPPE1
ZNF366
WDR54
CLCN4
C2orf81
C11orf49
KAZALD1
OSBPL7
H4C8
RABEP2
MAP1LC3C
VAMP1
UBE3B
THUMPD2
DGKD
WRAP53
TP53
TJP2
PPIL2
PCIF1
NDUFA4
GATAD2B
FRAT1
CLMN
REEP3
JMJD1C
VPS11
SYT12
GPAA1
EXOSC4
ESCO1
SLC35B1
ETFBKMT
MEIG1
COX7A2L
RAB27B
TRMT6
MCM8
CKMT1A
SHISA5
PFDN4
SMARCC2
RAB5C
ID2
TFB2M
CNST
RANGAP1
PRX
FNTB
SIKE1
NDRG1
EDN2
TEFM
MRPL21
IGHMBP2
DMXL2
SDHAF3
SASS6
TSPAN4
POLR2L
PLEKHB2
NOSTRIN
DPY19L3
APBB1
RNF20
PPM1E
NCR3LG1
CDH1
MMP9
MUC5AC
STMN1