ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
IDH3B
MTRNR2L2
CCDC59
NAGPA
RBM19
MTRNR2L8
SUMF1
NGDN
TRMT1
ATG14
MRM3
GLOD4
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
ISY1-RAB43
ISY1
GATB
CDC23
MTRNR2L6
VPS50
HEPACAM2
MRPS18C
HELQ
GPATCH3
MRPL39
TSR3
GNPTG
PPWD1
CENPK
ZFYVE26
UBE3B
COPS7B
SMG8
RBM48
PEX1
ZNF165
GTF3C5
EIF2D
SPNS1
MRPL1
MTRNR2L1
SFSWAP
C8orf33
RTTN
LMAN2
COMMD9
KRR1
WASHC2A
RANBP6
GET3
ZC3HC1
MED24
NDUFAF2
ERCC8
ERAL1
PHF5A
ACO2
MED6
SSNA1
ANAPC2
TMEM41A
TMEM199
POLDIP2
WDR18
POLR3F
DZANK1
MRPL44
NOC2L
SREK1IP1
CWC27
TRAPPC2L
GALNS
NCAPH2
LMF2
BRIX1
PSMB7
SUPT7L
SLC4A1AP
INTU
TCTN2
PUS10
PEX13
TRIP4
TOMM22
NDUFS3
KBTBD4
TFPT
PRPF31
XAB2
DNTTIP2
EIF3H
PPT1
BSDC1
ALG1
C16orf91
TIMM22
POLR1F
VIRMA
NDUFS7
TOMM6
MRPS15
ZNRD2
MTIF2
RNF26
PEPD
FEM1A
SAP30BP
RECQL5
CWF19L1
COPS5
URM1
PDCD6IP
FBXL12
LARS2
RBM42
MRPS14
FAM162A
CCDC58
NUP214
BABAM1
UQCC1
MRPL45
EIF1AD
BANF1
RRP15
NOL8
CENPP
MRPL55
RPTOR
TMEM208
LRRC29
SETD3
CCNK
FASTKD2
PEX19
EIF3F
TMEM101
CRBN
ADPRS
TAF3
BBS1
TSR1
ZMAT2
HBS1L
DBT
LIN52
ALDH6A1
TMEM126B
DLG2
TMEM203
NDOR1
PFDN1
MTBP
MRPL13
NPM3
PMPCA
ENTR1
UBIAD1
NSFL1C
WASHC2C
NUP160
HEXA
DNAJC30
BUD23
NMNAT1
LZIC
TIMM17A
TRIAP1
MKS1
BRF2
VPS11
TXN2
GPATCH4
SF3B2
MRPS11
MRPL46
CPSF1
SF3B3
COG4
RCE1
MYL5
ATP5ME
RTN4IP1
QRSL1
DDX23
MRPS22
YIPF2
TIMM29
TRMO
SPRYD4
SENP1
PFKM
MRPL21
IGHMBP2
COX10
HNRNPA1L2
NOL11
IPO11
MOCS3
DPM1
CEP20
COX16
PSMC3
C5orf51
NMT1
DCAKD
MRTO4
EMC1
ATP5MF-PTCD1
ATP5MF
ZNF213
METTL16
COMMD4
MRPL2
KLC4
QRICH1
MRPS31
TAS1R1
NOL9
PISD
C12orf43
KAT8
PIGL
UTP20
TRMT61B
KCTD5
NUP54
TACO1
C17orf75
NEURL2
CTSA
WDR74
RBX1
LONP1
CATSPERD
SUGCT
MPLKIP
PELP1
MFN2
TOP3A
SMCR8
ZFAND2A
RABL3
GTF2E1
TEFM
VPS33A
ZSCAN22
NCAPD2
MRPL51
ARFGAP2
BLOC1S1
ZNF17
OSCAR
NDUFA3
RPUSD4
FAM118B
NDUFAF1
UHMK1
OXNAD1
DPH3
MRPL58
VCPKMT
HSPBP1
THUMPD1
SLC25A53
ZBTB45
OS9
ATP7B
ALG11
GRWD1
OPA1
OAZ3
MRPL9
XPO4
CDK5RAP1
TAF2
DNAJC11
TATDN3
NSL1
MZT2A
TPP1
STX18
DMAC2
MRPL48
VPS25
LIN7C
POLR1H
MNAT1
TNPO3
VAC14
ABT1
LAMP1
ANKRD13C
PPP1R7
PASK
WDR24
KDM4D
CWC15
DNAJB12
RNF6
ERGIC2
TJAP1
ZZZ3
RNASEK
TMX2
MED19
WDR48
SCN11A
USP54
EIF3E
ALKBH3
COPS8
MPHOSPH10
MCEE
TSN
AURKAIP1
TIMM21
FBXO15
SLC7A6OS
PRMT7
POLR2K
SYF2
MED23
SLC35A3
HMGCL
DUS2
DDX28
DIABLO
TM9SF4
MRPS10
USP30
NOC4L
DDX51
ZDHHC6
VTI1A
TRMT44
ACOX3
STX16
CSTF2
TBRG4
ZMPSTE24
SEC16A
C9orf163
ZNF770
SUPV3L1
PHB2
WDR53
FBXO45
ZNF2
XPC
LSM3
DOHH
RPS28
NDUFA7
TAF11
ARMC8
GCDH
HAX1
DDX46
ZKSCAN4
NDUFB5
MRPL47
WDR83OS
WDR83
FDX2
USP8
SLC35B1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SLC25A26
ZC3H18
SMPD4
MZT2B
NDUFV1
EFTUD2
CCDC103
WDR36
NDUFA10
SART3
ISCU
EXOSC3
RFXANK
BORCS8
MTO1
SNRPC
EEF1E1
KLHDC4
SRPRA
APTX
LSM5
CCDC43
TUFM
SH2B1
CCAR2
ZCCHC4
FANCD2
YBEY
MCM3AP
CDKAL1
NUF2
RPUSD2
LRRC8A
KYAT1
TRUB1
STOML2
METTL2A
TAX1BP3
EMC6
PUM3
NUP155
GTF3C3
MTRNR2L3
GOLGA3
RANBP3
NDUFA9
AKAP3
UBL5
UQCRC1
MAP3K7
MTMR4
MRPS17
TBC1D22A
MCOLN1
ZBTB8OS
RBBP4
ZNF205
GTF2H3
EIF2B1
ZSCAN30
RPS7
TBC1D17
AKT1S1
PEX3
ADAT2
ZDHHC16
EXOSC1
DPP9
ZKSCAN8
CCDC97
UBXN11
C12orf73
PIGK
NDUFAB1
UBN1
GLYR1
AP3S2
NFKBIL1
ATP6V1G2
SLIRP
ALKBH1
EMC4
SF3A3
ARFGEF2
ZNF461
PHAX
MED4
MRPL35
SELENOH
ACIN1
COMMD2
WDR11
GBA
TSR2
SDHC
TERF2IP
KARS1
AP5Z1
NOP16
HIGD2A
PWP1
MED27
NCSTN
COPA
MAPKAPK5
L3MBTL2
FAM32A
CXorf56
ZNF408
ARHGAP1
ZNF383
MED9
NSUN4
ZBTB11
IQCH
AAGAB
MRPS7
GGA3
TRDMT1
AP1G1
SH3YL1
ACP1
PTCD2
MRPS27
AP3S1
RTEL1
NXT2
MTOR
CWC25
GCN1
TMEM126A
MTX1
TMEM230
POLR2J2
SMG7
GOSR1
UMPS
ASH2L
TOP3B
MRPL53
ZNF561
SSBP1
HIRIP3
PCID2
CUL4A
SPTLC1
ELP5
CTDNEP1
YIPF3
POLR1C
TTC31
CCDC142
GPATCH1
UQCRB
ATAD3B
MRPL20
SPC25
PTCD3
POLR1A
NUP107
MRPL4
PSMB2
TEPSIN
NDUFAF8
MED18
TMEM128
SEC13
PRPF38A
ORC1
WDR4
FUZ
METTL1
EEF1AKMT3
SDE2
DCP1A
NSA2
GFM2
DUS4L-BCAP29
DUS4L
COG5
REXO4
FAM149B1
ECD
VPS52
RPS18
MRPL3
ITGB3BP
EFCAB7
SMU1
MRPS18A
OSBPL9
IMMP1L
ELP4
ANAPC5
SF3B6
FAM228B
GTF2H4
TBC1D23
MRPS34
EME2
SLC33A1
ALG10
TBC1D19
CEP162
TMEM217
TBC1D22B
MFSD5
SCAF11
LYRM4
FARS2
ATP6V1C1
TMEM183A
ZNF79
MAGOHB
SEC11A
FAM104B
PSME3
GRPEL2
ITGB1BP1
CPSF3
POMZP3
SNRPD3
GUCD1
WASHC5
NSMCE2
DHX40
CSTF2T
ABRAXAS2
TIMM44
MRPS35
MIA3
FRA10AC1
PEX14
NOB1
ANAPC1
EXOSC9
ANKFY1
GTPBP10
ZNF195
PSMC4
GPN1
CCDC121
ATXN7L1
DNAJA3
SRRD
HPS4
PCNP
FAU
RNF166
CTU2
MRPS23
NUFIP1
GPALPP1
SF3B5
RUVBL1
EEFSEC
FAF2
CHMP4A
ZNF497
DVL2
ANAPC11
ALYREF
TM2D1
SPDL1
CMTR1
AQR
ZCCHC10
NDUFA5
NOL10
VAMP3
METTL14
NR1H3
ACP2
ZNF721
SSU72
PIGG
PNPT1
MFSD1
HMBOX1
NELFA
TTC26
RPAIN
NUP88
FCF1
AREL1
MAGOH
DDX19A
SAP18
RAB3GAP1
SDHAF2
CPSF7
NOLC1
TBCC
BICRAL
RAD54L2
MYSM1
MTRF1
IPPK
CHM
BHLHB9
CACTIN
UBE2L3
HIF1AN
ZNF581
PRR3
GNL1
EIF4B
NOL12
DHDDS
ZNF614
WBP1
NDUFC2-KCTD14
NDUFC2
ATP6V1G1
VPS41
SDR39U1
RPL9
LIAS
MYNN
ZWINT
PPIL1
DNAJC25-GNG10
DNAJC25
OTUD6B
ZNF501
DDTL
DDT
OTUB1
MRPL37
CYB5RL
PPIL3
NIF3L1
GID4
ATPAF2
NUDT5
CDC123
RBBP5
NDUFAF5
ESF1
DNAJC13
OSGEPL1
MED28
ATF6B
STK36
RNF25
METTL2B
NME1-NME2
NME1
MAZ
TBL3
THAP10
LRRC49
NDUFS4
KLHL7
VPS35L
B4GALT7
RBM28
TOR1AIP1
TMEM237
NFX1
EIF4G2
RBM23
TFIP11
RMDN3
MRPS18B
PRKRIP1
ZNF292
ILF3
BORCS7
NDUFB3
FAM126B
DDX49
COPE
ZNF594
THOC1
RSL24D1
JRK
DOLPP1
YJU2
CLPTM1
ARMC1
RPP30
MED21
RNASEH1
GPAM
TFB2M
CNST
NOXA1
TMA16
MITD1
UBE2L6
TBC1D30
GNS
TSFM
TBC1D15
UTP15
ANKRA2
SEC24C
PAF1
FAM227B
DTWD1
SDHB
CCDC57
TBCK
AIMP1
COQ3
NKAP
THBS4
MTX3
ATRIP
ZNF426
DDX47
FAM207A
GRN
COPS4
MAN2C1
PPAN-P2RY11
PPAN
POLR3B
AASDH
LEMD3
ZSCAN9
SPC24
GOSR2
BMS1
UBN2
ALG10B
TIMM50
NCBP2AS2
NCBP2
CENPW
RBPJ
NDUFB6
SERP1
EIF2A
MRPL27
EME1
VPS37A
CNOT7
ZNF3
TUT1
WDR25
WARS1
PSMB6
SIRT3
PSMD13
HTRA2
NAT10
MAF1
TRAPPC4
RPS25
TCERG1
TBCCD1
DNAJB11
UBA5
ACAD11
NUP133
RPL23A
RUVBL2
GYS1
PLAA
IFT74
DNAJC2
ZNF507
GATAD1
CHCHD1
COQ5
NARS1
RPAP1
KIF22
DPP8
HSD17B10
ZNF875
ANAPC10
ABCE1
DCTN6
POLR2J3
LTN1
BNIP1
MESD
TRIM23
TRAPPC13
SHLD3
DMAP1
IKZF2
CCDC137
ANTKMT
BLOC1S6
PFDN4
FBXW9
INTS12
GSTCD
BRCA1
SDHD
SEC22B
RPL37
RNF181
WDR20
HSP90AA1
MALSU1
BRMS1
TRAPPC8
YARS2
MFSD8
ABHD18
ZNF579
ZNF304
ZSWIM1
ZNF181
METTL17
GID8
DIDO1
PINX1
ZBED5
PPIG
VTA1
NMBR
PRPF6
EXOSC5
BCKDHA
MRPL22
USE1
STK16
GLB1L
TDG
MICU2
IVD
C1D
ATP6V0D1
IARS1
MTMR9
COPZ1
MRPS28
EIF3K
SAR1B
TAF9
RAD17
AK6
CLN3
QTRT1
SBDS
NHP2
ST7L
CAPZA1
TYW1
KANSL2
CHMP2A
PEF1
POLR2J
RBM8A
DPH1
GTPBP3
SLX4IP
ABCB8
CCDC77
KDM5A
SRSF11
LRRC40
DCTN4
RPL14
COX7A2L
SLC24A1
INTS14
CFAP298-TCP10L
CFAP298
STARD3
FXR1
HEMK1
KLHL12
SPTY2D1
PROSER1
NHLRC3
HNRNPH2
CHIC1
RPS6KB2
PRMT5
NRAS
MUL1
FASTK
WDR61
CGGBP1
C3orf38
POLL
DPCD
KLHL26
TXNL4B
DHX38
PSMD4
GMPPB
PDCD7
MTF2
ATG5
MED1
MRPS30
ZGRF1
LARP7
TMEM222
BET1
LAMTOR3
MARCHF8
PRKRA
PJVK
FAM98B
DDX41
PURB
CCDC86
COPS9
ZCCHC9
TRIM52
PLEKHM3
CDK11A
PMPCB
SNRPG
DCAF10
SDHAF3
C2orf49
KLHL20
PFDN5
AAR2
PSMC6
USP20