ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1393088 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX359928: LoVo

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◣ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

NR1D2
NKIRAS1
TEF
AGAP11
ADIRF
NR1D1
PER3
AP5S1
PER2
VAMP2
PER1
CRY2
DBP
CA11
CPEB1
SERPINE1
ANKRD12
RALGDS
PPL
OSGIN1
PIK3IP1
AVPI1
SPHK2
BHLHE40
DUX4
FOSL1
FIBP
CCDC85B
RRAGC
MTRNR2L1
GET4
IER3
FLOT1
FRG2C
EIF5A2
LAMP1
HLF
FOXJ2
KLF11
PLXDC1
USP36
MTHFD1L
OLFML2A
NR6A1
RAD9A
PPP1CA
SNAP29
PI4KA
HIF1A
CRY1
ACTN2
TSPAN4
POLR2L
CLN6
LSM12
G6PC3
NPIPB15
RPS29
NOL8
CENPP
TMEM116
ERP29
PPP1R3C
TRAPPC6A
BLOC1S3
CCDC24
CLUAP1
C16orf90
IGSF8
NPTN
SNN
AGO1
NEMF
RIPOR3
KHDRBS1
MARCHF8
GTF3A
FRG2
ATXN2
ELFN2
GNPDA1
PLD6
PC
PNP
PIP4P1
OSGEP
APEX1
VPS26A
TSPAN31
MARCHF9
CDK4
LIN54
YPEL5
POLG2
DDX5
COL23A1
CREBRF
SLC25A39
ELAVL3
XKR9
LACTB2
ZNRF2
FAM214B
RAB3IL1
CPLX3
RNASEH2C
KAT5
FAM117B
BHLHE41
CRYBB1
ADAMTS14
FAM76A
HSF2
RNMT
FAM210A
STMN1
SCAF11
TMEM185B
ERCC1
GIGYF1
HOXC13
CAMKK1
TRAPPC2L
GALNS
OTUD1
ITGB2
UCKL1
THRA
MRPL40
HIRA
COMMD8
SHKBP1
LARP1
PMEPA1
PPP1R1B
NEUROD2
KLF10
HSPB1
G3BP1
SLC35A5
ATG3
PUM2
SIT1
CCDC107
ARHGEF39
PPAT
PAICS
SLCO4A1
PNO1
CHAMP1
CLCN7
SLC30A1
RLF
TRAPPC9
EIF4G1
CHKA
TRIP6
SRRT
NXT1
GZF1
SIRT1
MTHFR
CLCN6
CFAP251
FOXRED2
GBE1
GPR146
DGAT2
ZC3H10
ESYT1
MICU1
ZNF239
DCAF4
ISOC2
HSF1
BOP1
ATIC
LPIN2
EPM2A
SLC20A1
ART1
ZNF696
BCAR1
LDHA
RELL1
ANKRD53
WBP2
LOC102724770
DGCR6
TKTL1
TEX28
TTYH1
MAMDC2
COL6A1
SNAPC1
RPEL1
MAN2B2
MTRNR2L8
SYNJ2BP-COX16
SYNJ2BP
GALR1
ZFYVE28
CFAP99
COL6A2
NTN5
PTPRN2
CRYAA2
CRYAA
COLEC11
PLEC
PARP10
GRINA
TMEM114
CD22
SPATA3
LFNG
BTNL9
TYMSOS
TYMS
PCBP3
HACL1
BTD
BSX
MMP8
PIP4P2
LRRC24
C8orf82
GAS8
FSCN2
CBFA2T3
IL4R
CYP2W1
OTUD3
LY6L
SPATC1L
FOLR1
MTRNR2L2
MSH3
DHFR
FNIP1
ARHGAP39
CACNA1I
TUBB2B
CABLES2
TFDP1
PROZ
SLC25A13
H4C15
H4C14
H3C15
H3C14
H2AC18
EPN1
GNA12
RORC
H4C12
H4C11
C2CD4D
ZNF750
FAF2
U2AF2
CCDC106
LINGO1
H2BC14
H2AC14
SEPTIN9
MUC3A
SLC35F6
STARD8
HERC3
OPRL1
AJAP1
MCF2L
THEG
PDE4C
SLC39A14
CASC3
UBL4B
FOXL1
SLC22A11
NDUFAF8
MDGA2
H2AC19
GGA2
SCUBE1
LRFN4
AFAP1
DNAJA3
CORO7-PAM16
CORO7
GNAS
JPH3
LMF1
FCMR
AGRN
C7orf50
PKP3
COPS7A
DLGAP4
PINX1
LRRC3
H3Y2
NFXL1
PDXK
HNF4A
PKD1L1
KRTAP5-7
BCAT1
PSMG3
CEP112
CYTH3
CACNA2D4
ZNF623
UTS2R
PIRT
TRIB1
OGDH
PWWP2B
LYPD8
CSNK1D
MXI1
FNDC10
THNSL1
SYCP1
TRIM8
IQCE
HPS5
GTF2H1
BRAT1
RRP1
PPP6R1
ADARB1
TBCEL-TECTA
TBCEL
WDR97
SNRPE
MAF1
CYC1
SLC12A7
ADPRHL1
TNFRSF6B
RASAL1
ATP12A
LY6E
LGR6
ZFP36
TLCD3B
SUN3
PLEKHG2
LOC112694756
C7orf57
KIF5C
BOK
PLA2G6
PGAP6
MRPL28
GYG1
PDP2
LMLN2
C14orf119
ACIN1
ZNF778
TMEM132C
SLC22A31
RAB37
SPG21
PHF20
C13orf46
H2BC15
H2AC15
PTBP1
ARL4A
TERT
SPAAR
HRCT1
MUC20
MN1
NR2F1
GGT5
AMZ1
UBAC1
NOC4L
NDUFS6
MRPL36
ILVBL
DDX51
RGS19
LKAAEAR1
SPATC1
POLI
TBC1D3L
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
RASA3
PALD1
HAGHL
CCDC78
ANTKMT
OTOS
KDM6B
DIXDC1
ZNF706
ZBTB37
UPF3A
RGPD2
RGPD1
MTA2
FLT4
RASD2
GTPBP6
PMS2
NECAB2
CDC16
AIMP2
ZFP2
TBC1D3K
TBC1D3
SHISA7
KRTAP2-2
KRTAP2-1
KRTAP1-1
CAMK2B
TBC1D3C
SLC16A3
RUVBL1
EEFSEC
SIGLEC12
ILF3
DGKG
ASPHD2
ADGRA1
TRAF3IP3
ACTB
PGS1
ADGRB1
RGS11
SYNGAP1
PHF1
HDAC4
FLCN
CUTA
AATF
RPL3L
PLET1
NDUFB10
MSRB1
KRTAP4-12
KRTAP4-11
CCN4
ZNF831
ZC3H4
SOX12
SMARCE1
MC3R
CCDC116
TLX2
SDK1
PCGF1
LBX2
CSRNP1
C1orf159
ZNF331
TMEM132D
PRR29
LRTM2
NAPA
LRRC37B
DACH1
UBE3C
INSM1
SERINC4
SERF2
PIK3R2
KCNJ15
HYPK
NEU4
KRTAP9-7
KRTAP4-4
KRTAP4-3
DLG2
CEP295NL
GPD1
COX14
KLHL38
CNNM2
ATP11A
SDHA
RFNG
GPS1
DCXR
CCDC127
TPSB2
TPSAB1
L3HYPDH
KISS1
KCNK3
JKAMP
ARL17B
ARL17A
RP1L1
RASGRF1
PHACTR3
MAP2K7
MYEOV
EMILIN2
CNOT3
CNDP2
TM4SF20
SMOC2
ASPSCR1
USP7
UBE4A
UBE2QL1
CAP1
C4orf19
YTHDF1
SERPINB9
RAD50
TBX1
SUN2
COL13A1
ARHGEF10
MRPS14
OSBPL5
FAM25E
WTAP
SOD2
KRTAP9-9
KRTAP9-8
KRTAP9-3
GLI2
FAH
SURF4
SCN5A
RPS21
RAB40B
PDE1B
VENTX
SPPL2B
LSM7
SETD1A
POTEH
ORAI3
SLC22A7
MAPK1
LOC100130520
CD300H
GCNT2
CIPC
CD55
BPI
ADGRG1
UBE2Q1
SLC7A5
SCAP
NPM1
CHRNB2
SOWAHA
PDE9A
CPNE7
ACSS1
TAS1R2
OTOF
TULP2
OR2M2
NUCB1
KRTAP9-4
KRT17
IRAG1
PIGQ
NHLRC4
UPK3A
SBK2
MFSD2A
LDB1
CEP72
ACY3
CITED4
DEPTOR
TXNIP
TMEM242
ST3GAL1
SOHLH1
SCGB1C2
MAT2A
LRRC14B
KRTAP2-4
KRTAP2-3
AIG1
ERCC4
CGREF1
ABHD1
TMEM204
TMEM132B
RASGEF1C
LDHB
ISYNA1
ANKRD18A
ADK
TRPM2
TMEM238
TMEM190
TBC1D3F
SLC25A38
SARAF
RPL28
OCA2
MTNR1A
MEF2D
LEPROTL1
EIF4A3
DOK7
DACT3
CNN2
ABCA7
SNX8
SLC38A10
N6AMT1
KRTAP9-2
KCNS3
GRM8
FN3K
EFCAB3
ARHGAP45
S100A8
RTN4R
KIAA1522
CD7
ACAD9
LY6H
GOLIM4
FBXL22
SHC2
MARK2
HK2
C1R
ACTRT2
ZFP91
TPO
LPXN
LCN1
RGPD6
RBFOX3
NLK
KCNK9
TMEM255B
RIMBP2
LOC100996750
KRTAP4-7
DRD4
CDHR1
SLC35F4
RAMP3
PAPLN
NPEPL1
HCN2
FAM240C
ACSM2B
TMEM80
SQLE
SPRING1
RNFT2
MARS2
DEAF1
FRMD1
BCL2L14
WDR37
SLC45A1
IDI1
GRB10
FOXI2
ZNF213
KRTAP10-5
KRTAP10-4
HAGH
FAHD1
CDT1
TMSB10
SERPINA5
GOLGA6L7
CERS3
PDE4D
NUDCD3
NKAIN4
ARRDC4
ZNF74
ZNF16
TOP1MT
SPEG
PNMA6E
MGAT3
KRTAP4-9
KRTAP4-8
FGF3
CTSH
TBC1D3E
HBZ
HBM
USP32
TUBB3
SLC7A10
MS4A15
MC1R
KRTAP9-6
CASQ1
NUP188
HGC6.3
GEMIN4
DOLK
TMEM248
SLC5A6
KRTAP10-7
KRTAP10-6
HPCAL1
CAD
ATRAID
ALDH3B2
ZDHHC11
ZCCHC7
TPSD1
SELP
PVALB
MIOS
ASB6
SLC5A9
OPCML
GNAI2
TPD52
TDRD15
SDC3
RAB40C
LPA
HOXA7
HOXA6
HOXA5
HOXA3
C3orf70
AJUBA
TEPSIN
PDE4A
MB
LORICRIN
ISLR
HELZ2
FNDC11
FAM104A
CEP131
C17orf80
SGTA
FXYD3
MPP2
KRTAP10-3
UBAP2L
SLC9A3
MRAP
FOXL3
ERRFI1
CD5
C1orf43
ZNF536
TMEM119
ANK1
MARVELD1
KPTN
TP53I11
SLC16A1
CCR6
C1QTNF1
BAIAP3
TMEM175
SLC27A5
SEPTIN5
SEMA4D
GP1BB
GAK
ANKLE2
GAS6
RELT
NACC2
GOLGA6L3
SPACA3
PHRF1
NLRP9
LPAR6
KLHL31
GOLGA6L10
GJB3
SHTN1
PPP6R2
ELFN1
B3GNTL1
ZSCAN22
NOS1
KRTAP9-1
KRTAP4-2
KRTAP4-1
EDN2
BBC3
LRRC56
HRAS
GDF2
C19orf48
RTP5
PDCD1
MYBPC3
CFAP20
B3GAT1
AGR2
SLC19A1
RUBCN
GSTT2B
GSTT2
FYTTD1
DDT
ZCCHC14
PCDHB12
PCDHB11
PCDHB10
ADAP1
PRLH
PIM3
MMP25
GRK1
CACNA1B
IPMK
GGTLC3
CRX
CISD1
ASPH
ABR
TRAF7
INMT
MUC5AC
ANGPT2
UCN3
UBE2G2
SUMO3
KRTAP10-1
CERK
C17orf97
ZNF566
NEMP1
NAB2
CD300A
C3
MPP3
CD300LG
AATK
SELENOW
PCDHB13
CALN1
IL32
TECPR1
SHANK1
CLEC11A
SLC9A3R2
NMRK1
CCK
PNPLA2
THPO
ANGPTL2