ChIP-Atlas: Target genes

Potential target genes for KDM1A

Query protein: KDM1A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1133779 | SKNO-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM1A's Target genes

◢ KDM1A: Average

◢ SRX254613: HeLa

◢ SRX254619: HeLa

◢ SRX254624: HeLa

◢ SRX3271002: hESC derived pancreatic cells

◢ SRX3271003: hESC derived pancreatic cells

◢ SRX3271008: hESC derived pancreatic cells

◢ SRX3271009: hESC derived pancreatic cells

◢ SRX3271015: hESC derived pancreatic cells

◢ SRX3271016: hESC derived pancreatic cells

◢ SRX3271021: hESC derived pancreatic cells

◢ SRX3271022: hESC derived pancreatic cells

◢ SRX3271026: hESC derived pancreatic cells

◢ SRX753146: iPS cells

◢ SRX116430: K-562

◢ SRX186766: K-562

◢ SRX4493020: K-562

◢ SRX4493021: K-562

◢ SRX1133785: Kasumi-1

◢ SRX1133786: Kasumi-1

◢ SRX1133787: Kasumi-1

◢ SRX543183: Keratinocytes

◢ SRX6384905: Keratinocytes

◢ SRX6384906: Keratinocytes

◢ SRX6384907: Keratinocytes

◢ SRX6384908: Keratinocytes

◢ SRX1098752: LNCAP

◢ SRX1098754: LNCAP

◢ SRX387194: LNCAP

◢ SRX3265284: MCF-7

◢ SRX3265285: MCF-7

◢ SRX3833324: MCF-7

◢ SRX3833328: MCF-7

◢ SRX3265286: MDA-MB-231

◢ SRX5233154: MKL-1

◢ SRX5233155: MKL-1

◢ SRX890395: NCI-H526

◢ SRX890396: NCI-H526

◢ SRX3461646: OCI-LY1

◢ SRX3461647: OCI-LY1

◢ SRX1556106: PC-3

◢ SRX1556107: PC-3

◢ SRX527430: PC-3

◢ SRX4901016: SET-2

◢ SRX4901021: SET-2

◢ SRX4901027: SET-2

◢ SRX4901032: SET-2

◢ SRX757045: SH-SY5Y

◢ SRX757046: SH-SY5Y

◣ SRX1133779: SKNO-1

◢ SRX1133780: SKNO-1

◢ SRX1133781: SKNO-1

◢ SRX4609169: SU-DHL-4

◢ SRX7100371: SW 480

◢ SRX7100372: SW 480

◢ SRX7100373: SW 480

◢ SRX387195: VCaP

◢ KDM1A: STRING

KCTD12
MTRNR2L2
MSH3
DHFR
CLCN3
KXD1
OSBPL11
SLC29A3
MTRNR2L8
ZNF195
USP35
KCTD21
C1orf198
PLEC
TJP1
GCNT1
RAB22A
RFX1
SGSM1
EVPL
NLRX1
COL23A1
CYRIB
MFSD1
CLEC4A
GLG1
DPF1
ZNF335
OTUD6B
PRMT1
OR52B6
SLC15A3
AGPAT3
KCTD1
AHCY
ACVR2A
ACTR3B
PI16
UBE2O
AANAT
STAB1
PYY
NAGS
SH2D3A
VAV1
PAK4
OR2G2
JAML
ZNF558
MSANTD2
YIPF6
TRIM26
ZFYVE1
MAMLD1
MPZL1
FXN
PRR5L
COMMD9
FRG2
SIKE1
MICALL2
LPP
SOGA1
PDLIM7
SIGLEC7
METTL14
FGGY
SPATA12
CASTOR1
ELAVL3
RRN3
CLDN16
SH2D5
CSF3R
COL4A4
COL4A3
ZDHHC12
MS4A4A
DUX4
SETD1A
ARPC2
CCDC141
TPM4
RPL23
KIAA1217
ZDHHC24
ACTN3
KIF21B
FAM214A
SUSD4
SIGLEC8
SAMSN1
SLC15A5
COASY
PKD2L2
ACTA2
ARAP1
SYTL3
CRYAA
CRYAA2
MNAT1
MRFAP1
RASGRP3
PPEF1
C8orf48
SLC10A2
MYO16
UGT1A9
RTL8C
MFSD4B
IL1RAP
ZNF420
OSCAR
NDUFA3
VPS37D
SI
NOSTRIN
CD53
HNRNPA1L2
FAM89B
ZNRD2
EHBP1L1
LRRC34
RAB3IL1
DLG2
TMEM126B
OR2T34
THEM6
CFAP47
PWWP3B
OR2A5
ERMAP
SVBP
TLR2
PDE1A
SPHK2
RPL18
FAM83E
IL15
KRTAP9-7
KRTAP4-3
NUCKS1
LRRC25
RNF170
HOOK3
RERG
PDE4D
TRMT1
NACC1
IBA57
C1QTNF8
MROH2B
PLD1
HHEX
TFEC
NPEPL1
SRPK2
XYLB
NT5DC4
GJE1
OR11H6
YBEY
MCM3AP
TYROBP
TRIM59
NR2F6
ZBTB32
ARRDC2
TCIRG1
PPP1R12B
SPIN3
NDUFAB1
PEX11B
TFDP1
TACC1
GRK5
MTRNR2L1
PWWP2A
ZFP36
SWSAP1
LPIN1
NACAD
CACTIN
ZCCHC14
FAM117B
PDE4A
TWF2
VIM
SRRD
HPS4
NBPF1
RGPD2
RGPD1
CLPB
PSMD9
HPD
SYT11
GON4L
GFI1B
UBFD1
EARS2
TKT
SPATA2
C14orf93
PIGBOS1
PIGB
TDRKH
PRRT3
TMEM248
MKNK2
TIMM9
KIAA0586
DRG2
POLR1B
ARCN1
PPIA
RAB4B
MIA
PGPEP1
BTN3A2
CPPED1
TSC1
PHF19
MEGF9
DIO1
TIGAR
INAFM2
TCTN3
CFAP54
TJP3
ZEB1
GPR84
GTF2H4
CTPS1
NR6A1
NAE1
PHC2
RAB42
SIRT4
NCLN
BCL7B
PPP1R13L
POLR1G
ARHGEF1
LUC7L2
KLF1
TTC9B
UBE2L3
EXD1
CHP1
PNPLA6
FMC1-LUC7L2
FMC1
SNUPN
ZNF687
PRPSAP1
CHST12
RASA4
AKNA
FBXL19
POM121
PITPNM1
SYMPK
FOXA3
CDC42BPG
SORBS1
PIN1
NOS3
GCDH
EBI3
RPS14
BOD1
SMG7
IRF2BP1
MAMDC2
DHRS13
ZNF77
SERPIND1
RASA4B
PHF21A
GBA
IKZF1
FNBP1
SH2B1
ZSCAN25
CGREF1
ABHD1
GRK6
SAP30
IMPA2
CLK3
UCKL1
EFNA4
FRG2C
LSR
TFB1M
PPP1R7
PASK
PLIN3
YPEL3
TBX6
TCF3
PMVK
ENO1
GOSR2
TCEA2
SPDYE14
SPDYE10P
TADA1
RABEP2
ZSWIM4
SHFL
WASF2
VPS37C
POLM
GADD45B
CASTOR2
OSGIN1
EPS15
FCHO1
SLC38A10
BLCAP
HEATR3
TTBK1
NPAS4
ARID3B
NRXN2
CMIP
WDR74
CDC25B
DEAF1
NCOA6
SP7
BANP
H6PD
SRPK1
SLC35B1
RXRA
TMEM120A
FAM71E1
EMC10
RABL3
GTF2E1
RPP25
GAMT
COX7A2L
UNK
MEST
KANK2
TMEM80
SRXN1
GRPEL2
CCDC22
CACNA1F
PDRG1
DPP3
RC3H2
ACY3
NFYC
USP48
SLC25A25
ADAMTS14
KNL1
BRF1
SSH1
MRPS5
ST6GALNAC6
BBC3
NEK6
MAD2L1BP
RABGGTA
ADRM1
SREBF1
GTPBP6
ATG16L1
S100A13
SPTBN4
ING3
MTHFSD
CIZ1
ZCCHC4
EFR3A
MAP1S
CTDSP1
ICE1
ATP6V0E2
H3-3B
MRPL54
APBA3
OPA3
STX10
IER2
TMED9
KIAA0895L
FBXO21
TMEM107
PCIF1
GPSM3
KIF16B
SREBF2
LMTK3
CCDC88A
PPP5D1
CALM3
ATP5F1E
ZMYND11
BRAP
ACAD10
SMCO4
SOD2
JAM3
REXO1
HPN
ZNF606
NDUFB4
ARHGEF3
LDLRAP1
RFC1
ATE1
CCDC130
GNAI2
CPEB4
PTPRA
CBLL1
P2RX6
LOC100287896
LIPT2
HLCS
MMACHC
CCDC163
RPS29
KPNB1
FEM1A
CNTRL
SLC25A20
ZNF582
DNMT1
IDI1
PFDN4
CASC3
C1QTNF6
SPECC1
FAM110A
C8G
MVK
IQCE
BRAT1
TTI2
SLC35E2B
ZNRF1
UQCR11
TMEM258
FEN1
RPL6
DYNC2I2
TAF6L
PRR29
SNX15
FAM187A
EFTUD2
CCDC103
KHDRBS3
CEND1
TSNAX
ERRFI1
IPO13
PICK1
UBE2S
KDM8
PKDREJ
TTC38
NR1H2
SPOCD1
GPR137
MRTO4
EMC1
CALM2
AKT2
ERCC1
ANKRD13C
TRAPPC3
TMEM243
POLR3B
NDRG1
UROS
BCCIP
AP2A2
ISOC2
GSN
BLVRB
PRKACA
CIC
H4C3
H1-6
NBN
C16orf95
VPS52
RPS18
CNOT1
CBFA2T2
SIRT1
SIRT5
TUFM
FBXW5
ARAF
DYRK1A
SAMD4B
TMEM91
SEPTIN9
SLC6A6
RBBP5
KIF1C
INCA1
UBQLN4
LAMTOR2
PSMG2
EML2
TIGD1
PRKCSH
EIF4E2
CCDC151
EPB41L5
TMEM138
CYB561A3
NAIF1
GGA1
ATG4C
TGOLN2
SNX17
EIF2B4
ADAM19
FARP2
CDC42BPB
ASAH1
LMNA
MYO18A
FLCN
ETFB
DOHH
CCDC69
ALDH4A1
TMEM9
ANAPC15
H4C15
H4C14
ARL17B
ARL17A
ALDOA
VCL
C19orf48
PRRC2B
NOP53
DRC7
TXNRD1
TM9SF4
TIMM13
PRR36
BTBD8
SYNJ2
ST3GAL2
RPLP2
PIDD1
TIMM21
GPAM
FBXO15
AP2S1
SUPV3L1
SRCAP
NUDT15
LOC730183
DNAJB12
TMED1
SEC16A
C9orf163
ARL4D
TIPARP
AARS2
RPL7
RDH10
ELL
LIX1L
WDR43
RNF213
CZIB
PPP6R1
ATG16L2
OXSR1
PKN1
PEX14
DFFA
ARHGAP28
NPRL2
CYB561D2
CARD8
ADA
MOV10
KDM7A
AOPEP
NOC2L
KLHL17
SMN2
SMN1
CYLD
RILPL1
RNLS
LIPJ
TRMT61A
NUDT8
BIRC2
GNAL
TBC1D22A
ZC3H6
TNFRSF1B
TXNL4A
RBFA
RMC1
ZNF234
PRR14L
DEPDC5
PTRHD1
CENPO
CTDP1
EPC1
COQ7
TBP
PSMB1
MAPK13
MTRF1
SLC25A39
KDM1A
PRCC
CLTB
POLG
NHEJ1
PRR5
HEXIM2
C19orf25
PES1
HTR6
C6orf226
ZBTB21
TKFC
DDB1
DNAJA3
ZFYVE19
DNAJC17
RTTN
PAFAH2
SLF2
ZNF638
NRROS
ICAM1
RASGRP2
MEGF8
DGAT2
UTP11
NUP205
PRR5-ARHGAP8
RAD52
BTBD6
NTMT1
TIMM10
TEX46
TNFRSF1A
NEMF
DNAAF3
MELTF
SARS2
MRPS12
AGAP2
MEF2D
PHLDA2
FBXO46
NELFA
CTDSPL2
FLOT2
EIF2D
PPP2R3B
MIB2
LMNB1
C20orf27
FUS
IL1R1
KAT6A
C5
DOLPP1
SFSWAP
SNPH
DDX23
ACYP2
ID1
ATG101
POFUT1
PLAGL2
CCDC200
BRMS1L
C2CD5
EIF2S1
ATP6V1D
NUP85
CAST
RAB40B
C4orf48
TPGS2
APTX
PTPRF
ANKRD36
PKM
ZNF583
YJU2
SLC13A3
TTC30A
MAGI3
STARD10
ID3
TMEM161A
RPL32
GTPBP3
ANO8
MUC21
LRRC37A3
H2AX
PCMTD2
BCL9L
ARF1
NTAN1
HSPA9
SCFD1
TCP11L2
CDK9
TP53BP2
CSRNP1
SMG9
POLDIP3
ACTR3C
RHBDD3
EWSR1
EPN1
ARHGAP45
SPOP
TOR1A
SDCBP2
PNKP
PC
H4C11
BRPF1
PHF12
PERP
ADAMTSL5
D2HGDH
TOR1AIP2
TOR1AIP1
RAB3A
CCNI
FAM135A
RNF103-CHMP3
RMND5A
RNF187
ZNF419
B9D2
NRDE2
ATXN7L2
ABCA7
NOL8
CENPP
CARHSP1
WDR97
MAF1
TUBA1B
CDON
UBE2J2
NPHP1
TRIOBP
MIDN
ZNF24
DAZAP2
TTC33
PDLIM1
CDC25C
ZNF471
FKBP5
KANSL1
ADAR
CA14
RAP1GAP
FKBP8
EXO1
TRMT112
PRDX5
C22orf34
ZCWPW1
MEPCE
MCC
TMEM115
DCT
ZNF862
TXNDC12
BTF3L4
CNOT3
H4C12
KIAA0895
UBE2Q1
MARCHF7
PIGW
MYO19
RIC8B
RPS26
KMT2A
BUD13
PIK3R2
TADA3
ARPC4-TTLL3
ARPC4
ACBD6
DCTN1
PTS
RCOR3
ALG14
THG1L
UFSP2
C4orf47
RASSF4
NINJ1
NDUFA4
BORCS7
FBXO33
EED
CSE1L
NREP
NUDCD1
PIK3R3
BOLA1
NOXO1
GFER
FAM53C
DGKZ
TNRC6B
NCDN
KIAA0319L
DHX40
DYNLL1
ARHGAP35
FAM168A
RAB5B
PSMD1
ZNF428
APC2
MAP3K12
ZNF773
KIAA1522
ZNF835
NRL
GALNT10
CEP76
ANKRD36C
MED11
CAMSAP2
CALM1
NARF
CCDC90B
FNBP1L
ARL2
DGKI
GCLC
SNRNP25
POLR3K
SLC12A4
ZNF274
ZNF398
C15orf61
TMC8
TMC6
TARBP2
RAG1
MEX3B
JMJD1C
ITFG2
HEXIM1
SLC66A3
SIGIRR
WDR81
PDAP1
BUD31
CCDC116
SLC25A51
POMGNT1
PDE4C
ZNF331
SUCLA2
TNIP1
LONP1
CATSPERD
AP1M1
TSKS
AP2A1
KDM3A
CACNB1
INO80C
ZNF565
PDE4DIP
ZFP1
KEAP1
HPS1
FBXW11
ARIH1
LOXL2
DDX1
ADNP
SCNM1
LYSMD1
ARHGAP27
NAA16
EXOSC5
BCKDHA
ADO
HEMK1
C3orf18
DNAJB1
NEDD1
RANBP3
MICOS13
HSD11B1L
GABPB2
YY1AP1
DAP3
HLA-E
HACD3
SURF4
KRT8
MAP3K3
FUZ
PRDM11
TRMT10A
MTTP
NDUFS3
KBTBD4
NUF2
ADAMTS10
CDC42EP4
TSPAN31
RAB28
LOC100129484
ELOB
TFR2
EEF1AKMT2
ZFHX2
SLC39A6
ARHGAP9
L3HYPDH
JKAMP
ILVBL
MLST8
GPN3
FAM216A
HNRNPH1
GTF2IRD2B
TMTC3
GLIS2
CEP290
SCN8A
AHCYL2
NDUFA6
ADK
TMEM259
HPS6
HSP90AA1
IFRD2
RNASE4
ANG
SRSF6
PPP2R1A
TTC30B
POMK
TCTA
RHOA
HES5
UBXN4
HMBS
SGF29
CCND3
FBXL12
THAP11
RAB3D
NUTF2
ALKBH7
ZNF48
ANAPC7
PNO1
TMIE
ALS2CL
FAM193B
APRT
ANXA4
PACSIN3
MLF2
PTDSS1
MYL5
MTERF3
NDUFS7
IL12RB1