ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064482 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◢ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◣ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

PITX2
PMEPA1
SMAD7
CYP2B6
NODAL
ETS2
POU5F1
LEFTY2
ZNF664-RFLNA
ZNF664
CCDC92
SLC7A5
PCNX2
LAMC3
SH3GL1
CHAF1A
NPM3
FGF8
SNX9
TMEM63A
LEFTY1
WNT8A
ZFP36L2
PTPRN2
MMP9
CAV1
CNOT3
STOX2
SKIL
DNAJB8
ARMC9
RAD51AP2
CREB5
DUX4
TCF7L1
FAM20C
MTRNR2L8
DPPA4
TSPAN9
CTBP2
JUNB
HOOK2
FOXB1
MTRNR2L2
MSH3
DHFR
SNX18
DST
CD99L2
RPRM
VOPP1
ROR1
NEURL1B
SPIRE1
AGO1
NPFFR2
CHD1L
PRKAB2
ETS1
MCHR1
C1orf127
CLDN9
CLDN6
ATP1A4
LRRC2
TDGF1
LHPP
TEAD1
EPHA1
PLAGL1
GLB1L3
MMP8
NBL1
EFNB2
PLAAT4
TEAD4
NTM
LRAT
DIDO1
GID8
CDC6
PRICKLE1
EPN1
FAM178B
SHISA5
TREX1
FBXO40
SMAD3
SEC22A
NBPF1
SLC46A1
PCED1B
AMIGO2
MAST4
GUCY2C
PIP4P2
CASP3
CER1
STK17A
L1TD1
MDN1
CHD2
CBFA2T2
CYB561
WNT3
RAB15
NDRG2
ARHGEF40
SMIM3
TIMP4
PMF1-BGLAP
PMF1
CFAP410
MAD2L2
DRAXIN
SBNO2
STMN1
GOLGA6A
KSR1
MUC3A
TREM2
LEKR1
NAV2
ZIC3
RNF141
GOLGA6C
MTRNR2L1
ARID2
BCKDHB
CRYAA
CRYAA2
GATA4
KCNN2
HES1
ITGB1
SLAMF1
ZNF148
DCAF10
JUND
MRI1
ZSWIM4
USP53
USPL1
HMGB1
CALD1
GOLGA6B
ANO1
NUF2
PBLD
HNRNPH3
CCDC200
SNAPC1
EXOC2
GOLGA6D
URM1
FRA10AC1
CTSC
LY6D
SLURP2
LYNX1-SLURP2
LYNX1
PRKG1
MTF2
JMJD1C
SUPT6H
SDF2
RARB
TBC1D2
TCEAL8
LINGO1
LHX1
POLR3G
MBLAC2
CFAP298-TCP10L
CFAP298
TAF4B
WT1
SYPL1
STN1
KAT6A
SRSF2
MFSD11
SALL2
KRAS
LRRC37A3
PCBP1
ASIC2
EOMES
MNAT1
IL17RD
HEY2
RPEL1
BCL11A
NFAT5
GPC6
CCNL1
TBX22
NFE2L3
DACT1
PLPP2
DAB2IP
DCLK1
FGF6
BAMBI
DNAJC10
RNF43
TEKT3
APELA
MAX
FGF19
NEDD4L
TULP4
VPS13B
KMT2E
RAPH1
MSMO1
SLC6A15
RPS24
MOB4
PPA2
KDM5B
FRG2
CNTN1
BUD13
PRAC2
HOXB13
PDPN
HSP90AB1
FGF2
BMPER
KCNF1
GHRH
NOCT
COMMD7
RARA
NIPBL
TNPO1
DUSP6
EFEMP1
ZNF608
CORO2B
AVPR1B
ARIH1
FAM120B
DLL1
TPCN1
RNF213
KIRREL1
AKIRIN1
G3BP1
TMEM106B
GTPBP6
RTN4
PPM1H
CD101
ZCCHC3
FGF1
STRA6
PPARGC1A
PABPC1
LRRC57
HAUS2
CEP83
FOXN3
DAB1
MDFIC
NTRK2
WFDC8
ID1
LRP12
MMADHC
PLEKHA5
SLC7A8
GLI2
DPPA5
LHX2
HEXB
FEM1C
SNRPN
RTP4
NES
WASHC4
POU2F3
PIK3R3
SMN2
SMN1
LIMS1
DCP1A
SCOC
PDE1B
TEX46
KDM1A
TSPAN5
MARCHF7
MTX2
ATP23
GMCL1
CEBPZOS
SULT6B1
ZNF518A
NEUROG3
MED11
ZMYND15
CXCL16
NT5DC3
MRPL39
PICK1
FAM83F
VRK2
COL6A2
ID2
COPS8
IFNAR1
RIMBP2
H4C12
H4C11
H2BC15
H2AC15
ZNF286A
PCNA
TMEM230
CDS2
ZFHX3
IGSF8
TNFRSF13C
SHISA8
C1orf74
MICU2
SMAP1
OPA1
C3orf52
GOT2
USP37
CNOT9
CNPY1
LRCH3
ZBED6CL
RARRES2
NKX1-2
CDX2
NCOA5
WDFY1
CPNE8
MBNL3
CFAP161
SMC5
TSEN2
DNMT3A
GCNT2
FOXD3
MAP7
ALDH7A1
PHAX
TBC1D5
SLC1A1
DNTT
ANO10
ABHD5
WDR48
SCN11A
SCGB3A2
GLRA3
GFPT2
MLLT11
CDC42SE1
KCNT2
PIM2
LMNA
FAM186A
ANKRD46
RWDD1
LARP4
MARCHF3
MEX3A
PDE1C
BTNL9
MYL12A
MYL12B
FOXA2
WFDC1
HTR5A
ASCC3
SARAF
FFAR4
TLCD3B
LOC112694756
MYBL2
CTNNB1
CCDC88A
EXOC6B
DPYSL2
PTCH1
RYR2
PANK4
HES5
CEP70
BUB1B
SEPHS1
KIAA1522
FAT1
EPB41L2
DNAJC25-GNG10
DNAJC25
IKZF5
ACADSB
METAP1
GNA12
SH3RF2
ACCS
ADAMTS1
DPY19L4
LRRC59
LRP4
PMAIP1
CBWD5
RRP1B
HSF2BP
SPOP
DPYSL3
NFIA
PTGFR
STARD8
CAMK1G
LYPLAL1
STX18
CORO2A
CCN2
FAM149B1
ECD
WDR41
ARAP3
GABARAP
PHF23
DVL2
FAM227B
DTWD1
ADARB1
CHD1
PRUNE2
ZSWIM7
TTC19
TPM1
SLC11A2
PSMA1
SMYD2
PDE3B
KANSL3
FER1L5
GNL2
BCAS4
JADE1
CALM1
FOXP1
KBTBD8
PIPOX
PDE7A
MRPL21
IGHMBP2
ZNF251
MRM3
GLOD4
SNCG
MMRN2
RAB23
ITGAV
SPRED1
FDXACB1
C11orf1
ALG9
LRRC8B
LRRC3
SLC35G3
SLC35A4
APBB3
SRA1
EIF4EBP3
FOXJ3
RCBTB1
ALKBH3
FABP6
SOCS3
NRL
PCK2
GTF2H2C_2
GTF2H2C
GDPD2
ZWILCH
SNAPC5
RPL4
FRG1
TOMM7
OR5K3
STK26
SSBP2
TSEN54
CASKIN2
LLGL2
FCMR
MTMR2
STEAP1B
UNC5D
PAH
PURA
RBM18
MRRF
MTA3
MAML3
DNAJB2
CDR2L
HID1
PARPBP
NUP37
MAD2L1
CEP126
ANGPTL5
NR5A2
NFKBIZ
HERC3
DR1
PYURF
PIGY
APOBEC3D
APOBEC3C
KCNB1
MAPK8
TFAP2A
UGCG
CCDC43
OCIAD2
RTKN2
C5orf24
NOTCH2NLC
CDKN2C
GPR15
CLDND1
EFHD1
TRPM3
THAP9
SEC31A
UROD
HECTD3
FIGN
GART
TBC1D32
RAPGEF1
NEO1
MARCHF6
PSMB2
SNRNP48
F3
HASPIN
RBMS1
BEX3
ZC3H10
RPL41
ESYT1
ECI2
UBAP2L
C1orf43
SERTAD4
HNRNPA2B1
CBX3
HMGA1
DUS1L
PIMREG
AIPL1
SMIM14
PSMG1
NPAT
ATM
ARHGEF5
NADSYN1
DHCR7
ANKRD18B
BRIX1
CAPZB
MB21D2
IL34
SPRY2
COL21A1
CDC42EP3
GRID2
ZC3HAV1
SMIM8
GJB7
RMND1
ARMT1
METTL24
TBRG4
CCDC30
ZMYND12
PPCS
GABPA
ATP5PF
UNG
ALKBH2
OR2T1
LUC7L
FAM234A
STRAP
RRS1
ADHFE1
SOD2
WTAP
LANCL2
AMOTL1
SUPT5H
RPS16
PIK3C2B
LAMA5
CALM2
SDHAF3
RWDD3
SUSD1
FILIP1L
WASL
ZNF202
EAPP
WDR74
STX5
SRSF7
TAF12
PARP16
JPT1
TBC1D22A
ZBTB4
SLC35G6
POLR2A
CSRNP2
FAM53C
CDC25C
MYLIP
TMEM107
MKNK2
POLDIP3
BAIAP2
SDC4
FSCN1
C12orf65
FAM43A
HSPA1B
NXF1
UNK
H3-3B
SERPINE1
TTI2
VAMP1
PRDX1
PFKFB3
UBE2S
IER3
FLOT1
POLR3D
RNF19B
PITRM1
INTS5
GANAB
KDM4A
PSAP
TRIM25
VASN
NAGK
DNAJB1
FUS
PLEC
MICALL2
SCRT1
DGAT1
FBF1
AFF1
NDRG1
TOB1
BTG1
SOCS1
SIRT4
POR
GADD45B
PLK2
EIF4A3
NCEH1
SRSF3
PTPN6
C12orf57
USP42
PUS7
TUFT1
ZDHHC4
HNRNPH1
LDHA
HMBS
ARL15
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
SPTAN1
MTHFD2
TRA2B
RSRP1
TFRC
EXT1
H2BC14
H2AC14
RINT1
SRSF6
POLR2J3
SDCBP
ADCK5
KIF2C
LRCH4
FBXO24
CYCS
BLOC1S2
TGOLN2
ZBTB45
EIF4G2
KIF5B
HNRNPAB
DYNLL2
TTPAL
ZC3H12A
POLG
PRRG2
NOSIP
SGF29
RBM25
NARF
DENR
IER5
NEU1
SESN2
TNFAIP8
PNP
PIP4P1
PEDS1-UBE2V1
PEDS1
IFRD1
C1QTNF6
USP45
TSTD3
DESI2
SERINC5
R3HDM4
KISS1R
FLYWCH1
H4C3
H1-6
RARS1
ORC5
UBE2D1
TAF4
H2AX
DPAGT1
POLG2
DDX5
SLC1A5
TAGLN2
ERRFI1
GNAI2
SQSTM1
RELT
HBEGF
DYNC1H1
PABPC4
BSG
NANS
CYBC1
SKP1
CRISPLD2
FDXR
RPL3
ZFAND5
RAD23A
CALR
HPS4
TATDN1
NDUFB9
TERF1
ZNFX1
CDKN1A
ATF3
ACLY
DNM1L
NTMT1
MAT2A
HEXIM1
APTX
TRIM28
SLC16A3
FTL
SPPL2A
SMURF2
BRMS1L
C9orf50
CITED2
TCTEX1D4
BTBD19
DNAJB4
EHD1
SLC38A2
PHACTR4
SLC35B2
PPP1R35
PDLIM7
MEPCE
RBM34
P4HA1
IQCD
ERCC1
MLXIP
PLK3
MGAT1
PTDSS1
MTERF3
DYNLRB1
RNF14
MSANTD2
CRTC1
STAT1
KANSL2
NUDCD1
HEATR5A
IRF1
DNAJA1
ARL6IP1
UAP1
TSEN34
PHLDA2
CNNM4
SLC10A5
IMPA1
TUBA1C
OAT
TRIB1
PLAG1
CHCHD7
GOSR2
ZNF248
KLHL12
ALG6
BBC3
SEBOX
MRPS16
SPRING1
RNFT2
ARL4D
ZCWPW1
SLC3A2
RPLP0
GCN1
PYGB
PPIF
TUBB2A
TRAF4
RPL5
DRG1
TMEM199
POLDIP2
ZBED8
NBN
SENP5
ITFG2
METRNL
RND1
NDUFAF3
IMPDH2
DALRD3
NET1
S100A13
S100A1
CHTOP
SLC30A5
FARSA
RHOB
IER5L
PPP1R2
LOC100287896
LIPT2
STIP1
LRPAP1
SIL1
PPP1R3C
CSNK1G3
CAVIN1
TECR
STK38
INTS13
FGFR1OP2
PACSIN2
GALNT10
AMACR
BZW2
FAM83D
TMEM167B
UQCC3
LBHD1
TNFRSF10D
C2orf42
ASCC1
ANAPC16
SPIDR
SH3GLB2
B2M
PTPRA
PPP1R12C
PARK7
CSKMT
C11orf98
NASP
GTF2B
SMIM12
HLA-E
AMD1
CEBPB
NRBF2
XKR9
LACTB2
PTPN2
SLC27A3
CCDC80
CCS
CCDC87
ZFAND2A
FAM133B
OAZ1
NDUFB8
MIGA2
HIF1AN
SRP68
INTS6
WIPI2
TMSB10
GRB2
SERTAD1
RNF135
PGP
AHR
STX10
IER2
CRACR2B
TMEM190
GOLPH3
TGFBI
SGK1
RELL2
HDAC3
YWHAG
PRDX2
ZNF143
EEF2
RPL12
LRSAM1
MYH9
EFR3A
CYP20A1
RAB11A
KRBA2
EPHA2
RPAP2
GLMN
FAM126A
PRMT9
STPG3
FAM166A
GPR89A
THBS1
GPR89B
TNFAIP2
TNIP2
RNF34
UGP2
PDXK
DNAJC9
NOTCH2NLA
NFKBIA
RMDN1
CPNE3
DYNLL1
TRAPPC10
RIOX1
NOTCH2
E4F1
PARP2
CCNB1IP1
DBNL
KDM4B
ING1
CARS2
DUSP1
SLC26A2
RPL26
TSPAN17
ATP5F1B
PRPF4
CDC26
ATP6V0C
AMDHD2
RBMX