ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064482 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◢ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◣ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◢ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

PMEPA1
NODAL
CCDC92
FGF8
CAV1
STOX2
SKIL
LEFTY1
RAD51AP2
MTRNR2L8
MTRNR2L2
SNX18
DST
NPFFR2
CHD1L
PRKAB2
PRICKLE1
FBXO40
NBPF1
PIP4P2
CER1
STK17A
L1TD1
CYB561
NDRG2
TIMP4
CFAP410
STMN1
RNF141
ARID2
BCKDHB
ITGB1
ZNF148
DCAF10
ZSWIM4
MRI1
USP53
USPL1
HMGB1
CALD1
NUF2
HNRNPH3
PBLD
FRA10AC1
CTSC
LYNX1-SLURP2
LYNX1
MTF2
JMJD1C
TCEAL8
SYPL1
KAT6A
SRSF2
MFSD11
KRAS
LRRC37A3
ASIC2
MNAT1
NFAT5
CCNL1
TBX22
PLPP2
DCLK1
BAMBI
DNAJC10
RNF43
MAX
NEDD4L
VPS13B
RAPH1
MSMO1
MOB4
PPA2
KDM5B
BUD13
PDPN
HSP90AB1
NOCT
NIPBL
TNPO1
DUSP6
EFEMP1
CORO2B
AVPR1B
ARIH1
FAM120B
AKIRIN1
G3BP1
TMEM106B
RTN4
PPM1H
STRA6
PABPC1
LRRC57
HAUS2
CEP83
DAB1
FOXN3
WFDC8
LRP12
MMADHC
PLEKHA5
HEXB
FEM1C
SNRPN
WASHC4
PIK3R3
DCP1A
LIMS1
KDM1A
MARCHF7
MTX2
ATP23
GMCL1
ZNF518A
MED11
NT5DC3
MRPL39
VRK2
COPS8
IFNAR1
RIMBP2
H4C12
ZNF286A
PCNA
IGSF8
ZFHX3
C1orf74
MICU2
SMAP1
OPA1
C3orf52
GOT2
USP37
CNOT9
CNPY1
LRCH3
NCOA5
WDFY1
CFAP161
SMC5
TSEN2
MAP7
ALDH7A1
TBC1D5
ANO10
ABHD5
WDR48
SCN11A
GLRA3
CDC42SE1
MLLT11
KCNT2
ID1
ANKRD46
RWDD1
LARP4
MARCHF3
PDE1C
MYL12B
HTR5A
ASCC3
SARAF
CTNNB1
CCDC88A
EXOC6B
DPYSL2
CEP70
HES5
DNAJC25-GNG10
DNAJC25
METAP1
SH3RF2
ACCS
DPY19L4
LRRC59
PMAIP1
CBWD5
RRP1B
HSF2BP
SPOP
NFIA
LYPLAL1
STX18
CORO2A
CCN2
FAM149B1
ECD
WDR41
DVL2
FAM227B
DTWD1
CHD1
ADARB1
PRUNE2
ZSWIM7
TTC19
TPM1
SLC11A2
KANSL3
GNL2
JADE1
CALM1
PIPOX
PDE7A
MRPL21
IGHMBP2
MRM3
GLOD4
RAB23
ITGAV
SPRED1
LRRC8B
FDXACB1
C11orf1
LRRC3
SRA1
FOXJ3
RCBTB1
ALKBH3
PCK2
GTF2H2C_2
GTF2H2C
FRG1
SNAPC5
TOMM7
STK26
SSBP2
LLGL2
MTMR2
STEAP1B
PAH
RBM18
MRRF
MTA3
MAML3
DNAJB2
PARPBP
NUP37
MAD2L1
CEP126
NFKBIZ
HERC3
PYURF
PIGY
DR1
KCNB1
MAPK8
UGCG
CCDC43
RTKN2
OCIAD2
C5orf24
NOTCH2NLC
CLDND1
EFHD1
TRPM3
SEC31A
UROD
HECTD3
FIGN
GART
TBC1D32
NEO1
MARCHF6
PSMB2
SNRNP48
F3
HASPIN
RBMS1
BEX3
ZC3H10
UBAP2L
C1orf43
ECI2
SERTAD4
HNRNPA2B1
CBX3
DUS1L
PIMREG
SMIM14
PSMG1
NPAT
ATM
ARHGEF5
DHCR7
ANKRD18B
BRIX1
MB21D2
SPRY2
COL21A1
CDC42EP3
SMIM8
RMND1
ARMT1
TBRG4
ZMYND12
PPCS
CCDC30
GABPA
ATP5PF
ALKBH2
LUC7L
STRAP
ADHFE1
SOD2
WTAP
LANCL2
AMOTL1
RPS16
PIK3C2B
CALM2
SDHAF3
RWDD3
FILIP1L
WASL
ZNF202
SRSF7
WDR74
ZBTB4
POLR2A
CSRNP2
FAM53C
CDC25C
JPT1
SLC7A5
POLDIP3
MYLIP
MKNK2
C12orf65
NXF1
FSCN1
BAIAP2
HSPA1B
TTI2
PRDX1
FAM43A
UBE2S
VAMP1
POLR3D
RNF19B
PITRM1
SDC4
KDM4A
INTS5
NAGK
MICALL2
PFKFB3
DGAT1
TOB1
FUS
BTG1
SOCS1
POR
SERPINE1
PLK2
PLEC
EIF4A3
NCEH1
SRSF3
USP42
C12orf57
SIRT4
ZDHHC4
LDHA
ARL15
H4C15
H4C14
HNRNPH1
SPTAN1
MTHFD2
AFF1
TRA2B
TFRC
H4C11
DNAJB1
RSRP1
SRSF6
VASN
SDCBP
TBC1D22A
ADCK5
PSAP
CYCS
BLOC1S2
POLR2J3
TGOLN2
SOCS3
TRIM25
KIF5B
HNRNPAB
TTPAL
POLG
PRRG2
NOSIP
SGF29
LRCH4
FBXO24
RBM25
DENR
DYNLL2
IER5
NEU1
SESN2
EIF4G2
PNP
DESI2
H3-3B
RINT1
H4C3
IFRD1
ORC5
UBE2D1
H2AX
EXT1
RARS1
TAF4
RELT
ERRFI1
PABPC4
BSG
NANS
SKP1
FDXR
RPL3
TAGLN2
TATDN1
NDUFB9
ZNFX1
ATF3
DDX5
GADD45B
ZFAND5
MAT2A
NARF
APTX
TRIM28
SPPL2A
GNAI2
BRMS1L
C1QTNF6
PHACTR4
TUFT1
SLC1A5
RBM34
P4HA1
PTDSS1
MTERF3
HEXIM1
RNF14
KANSL2
NUDCD1
HEATR5A
DNAJA1
ARL6IP1
UAP1
PHLDA2
CNNM4
IMPA1
OAT
TRIB1
PLAG1
CHCHD7
ZNF248
ALG6
SPRING1
RNFT2
KLHL12
SLC16A3
USP45
SLC3A2
PPIF
SMURF2
TUBA1C
DNAJB4
DRG1
TNFAIP8
TMEM199
POLDIP2
ZBED8
NBN
ZCWPW1
MEPCE
SENP5
HBEGF
RPLP0
ITFG2
NRL
NET1
DYNC1H1
S100A13
SLC30A5
PPP1R2
LIPT2
STIP1
RPL5
LRPAP1
SIL1
PPP1R3C
CSNK1G3
SLC38A2
CALR
TRAF4
STK38
TUBB2A
INTS13
FGFR1OP2
TERF1
AMACR
MGAT1
TNFRSF10D
C2orf42
ASCC1
ANAPC16
B2M
PTPRA
PPP1R12C
PARK7
CSKMT
C11orf98
NASP
GTF2B
IER5L
SMIM12
FTL
SERINC5
RHOB
NRBF2
XKR9
LACTB2
PTPN2
IRF1
FAM133B
OAZ1
MIGA2
INTS6
WIPI2
NDRG1
HIF1AN
HLA-E
PUS7
GRB2
CCS
CCDC87
RNF135
CITED2
FAM83D
GOLPH3
SGK1
YWHAG
ZNF143
EEF2
IMPDH2
CRISPLD2
EFR3A
CYP20A1
RAB11A
TSTD3
RPAP2
GLMN
ID2
PRMT9
GPR89A
GPR89B
RNF34
NFKBIA
RPL12
LRSAM1
RMDN1
TPCN1
IQCD
EHD1
PARP2
TMSB10
KDM4B
SLC26A2
SRP68
METRNL
PRPF4
CDC26
RBMX
E4F1
DNAJC9
TBC1D31
NCOA3
MED17
TECR
FAM126A
UGP2
ARL4D
AMD1
RIOX1
DNM1L
XPO5
POLH
SPIDR
NTMT1
ADRB2
RBM6
BTBD10
AHR
ZBTB37
RELL2
HDAC3
FER
LOC100287896
UBA2
STAT1
SQSTM1
ADPRS
TAF13
LRIG2
SLC2A3
TMEM170A
C15orf39
EEF1A1
SMG5
HGH1
PSMD14
TNFAIP2
C19orf48
TAF12
ALDOA
TUBB4B
RASA1
RIPK2
DENND6A
GOSR2
YLPM1
DNTTIP2
BZW2
ANKMY2
RBM14-RBM4
RBM14
SCFD1
COTL1
SLC8B1
NFKBIE
FOS
ZMAT3
R3HDM4
ATP5F1B
TEP1
CPEB4
TMX1
RPS3
SRSF5
TRIP11
PTPN1
KCTD7
NUDT15
TM9SF3
NPM1
DIMT1
ALAS1
ACER3
CEBPB
ICE1
THBS1
CCDC80
ACAP2
FBXW2
PDK1
ADSL
NOTCH2NLA
MFAP3
FAM114A2
ATP6V0C
THOC3
FAM234A
IER3
SLC20A1
NUFIP2
SLC52A2
FBXL6
SEPHS2
DPY30
CZIB
IPP
MATR3
RPL13A
SPECC1L
RUNX1
S100A1
HRH1
AFG3L2
FAM220A
HMBS
CUL7
EIF3A
RETSAT
NOTCH2
GTF2A1
SMN2
SMN1
GLS
AMOTL2
SERTAD1
CDKN1A
CAVIN1
DELE1
ABTB2
TECPR2
CINP
RIDA
POP1
TPI1
DSCC1
NCL
EIF4A2
WDR47
GTF2H5
MGRN1
ASH1L
GTF2H2
HERPUD1
BORCS5
C7orf26
FGFR1
PDZD8
TUBA1B
POLR2D
SWI5
GOLGA2
GBA
DNMT1
MSANTD2
ING1
DYNLL1
AKAP1
RAB2A
CLIC4
TOB2
SLC16A1
ABTB1
TMEM138
CYB561A3
ZNF326
KLHL7
TAX1BP3
EMC6
SIKE1
TRA2A
KATNBL1
CRLS1
HSP90AA1
TNIP2
CSRNP1
MTRES1
DGKH
TKT
CNBP
PRPF39
RSAD1
LZTR1
SAR1A
SLX1B
SLX1A
BOLA2B
BOLA2
PDLIM7
C6orf89
TNRC6B
MCL1
SLTM
TMBIM6
STK38L
CCNG1
PSMD8
VCL
EPHA2
PCTP
GLUL
ASPSCR1
ATOX1
RABIF
SNF8
PLK3
MAPK1IP1L
BICD2
ZCCHC24
SSNA1
ANAPC2
RBM12
PGAP2
CPNE1
LIN7C
NOL11
ENTPD5
CEP85
BBOF1
XRN2
HSPA5
KCNG1
GSTP1
RAB6A
ZNF800
APPBP2
MLXIP
GNAI3
DBNL
DENND10
TMED9
LATS1
ZNF468
EPHX1
TFAM
DCXR
ATP5F1E
TAF15
KIF18B
RPL6
TK1
PRKRA
PJVK
ACSL3
GSTK1
SLC35C2
IMMT
SPATC1L
FAM13B
PA2G4
ZFAND1
AARS2
PDIA3
MAP3K3
JUNB
ATP6V1B2
WDR11
JUN
OTULIN
TSPAN17
KCTD13
EIF2AK1
SAV1
ZNF546
MACROH2A1
MKRN2
DUSP1
HES6
RFESD
ZDHHC16
EXOSC1
DDX3X
RBBP5
DPH5
SMOX
TSPAN10
NPLOC4
ZKSCAN2
CCDC61
RGS2
YKT6
TACC1
GFUS
C16orf72
ZNF622
TMEM71
PHF20L1
POMZP3
BCAP29
FBXW11
PTMA
BTBD1
OGDH
ERN1
EFNB2
POLR2C
MOCS2
ABHD16A
RND3
THADA
TBCCD1
BOLA2-SMG1P6
OPN3
CHML
SIRT1
SETD9
NEK4
C12orf29
ISCU
C2orf69
PRR13
POLE4
AMZ2
UCKL1
RPL22L1
DDIT3
CYTH2
MIB2
NUP133
MRPL10
LRRC46
HARS2
HARS1
TMEM242
CBFA2T2
MAP2K2
STXBP3
SMARCB1
SLC38A10
EIF5
TBC1D7-LOC100130357
TBC1D7
GOLGB1
PYROXD2
DNAL1
NABP1
LIMA1
NFE2L1
RDH11
YAE1
AHCYL1
SCRIB
VEGFA
HNRNPLL
SLC25A3
NEK1
CCZ1B
OSMR
RPS27
STK11IP
ATRIP
RPS12
CDC37L1
TBCE
MLF2
RPLP1
SLFN5
KNTC1
RPP21
PALLD
WDR70
BRD2
KLHL21
RPS20
GNAS
TKFC
DDB1
RSPH3
ADSS2
PTPN11
CYB5R4
DDX56
OGFRL1
LMTK2
COPG1
TAF9
RRN3
RAD17
AK6
ESYT2
DMWD
RPS6KA4
MCCC2
ATP5MF-PTCD1
ATP5MF
TRAK2
STRADB
TEX30
PACSIN2
SERTAD2
APMAP
PSMD9
HPD
ARHGAP39
ARRDC3
MTFMT
SAMD8
PNPLA2
HSDL2
ICMT
NUP188
MAD2L1BP
DOLK
SLC15A4
SETD5
CIRBP
BMPR2
TMEM68
TGS1
WDR45B
EIF4A1
RTN3
RABGAP1
ATRN
USP48
TRAP1
MYH9
KRBA2
PAG1
MAPK8IP3
MAK16
MTCH1
CHMP4A
CD55
HIF1A
SELENOT
RBM12B
ZFYVE1