ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026264 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◣ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
ZNF76
ISX
HES1
ANKRD40CL
STX16
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
NEK2
KRTAP3-1
HK1
RNPEP
LRRC59
APOA2
CDK5RAP1
TCF20
HOXC5
EPRS1
ARHGEF12
INTS9
HMBOX1
PI3
GUCY2C
ZBTB45
ZNF501
MRPL44
MALRD1
CDHR5
SLC45A4
HOXC6
HOXC4
PIK3AP1
RHOH
CCDC90B
STAT3
CASC3
ATF3
NUF2
ADAP1
HOXB4
ADNP
ZNF226
UBR2
CXCL2
RBM47
TUT1
KCTD5
C1orf226
TATDN3
NSL1
TEFM
PIK3C2A
DEPP1
NNMT
NCOA5
PRPF19
LRP2
ALG10
ZNF512B
ZGPAT
ARFRP1
AKR1E2
DUSP18
SPOP
MRPS16
GRAMD2B
NFAT5
AJUBA
PPP1R3D
FAM217B
JAML
MIA3
HNF4A
TRIM2
TMPRSS4
GBA
NR5A2
ACOX2
INTS4
MMACHC
CCDC163
MRPL53
TMEM248
CALM2
MRPL21
IGHMBP2
KMT2D
STAT6
SLC30A10
TOB1
BBS1
TM9SF4
YWHAB
THAP1
CFAP69
TRMT61B
CHPT1
PEX3
ADAT2
TFPT
PRPF31
BANP
WDR36
CTNNBL1
DCP1A
CCNL1
ZNF530
ALG10B
HIBADH
HPN
H4C12
USP30
SMG7
NPAS4
UBXN1
RAD51B
MARK2
E4F1
ADARB1
S100A2
RIC8B
TMEM126B
DLG2
TMEM60
PHTF2
KPNB1
RBBP5
GCNT4
HEPH
RAB3C
MGAT4A
SLC30A4
GSDMB
TPX2
IQSEC3
MEP1A
DDX23
TMEM69
GPBP1L1
SOX30
C5orf52
MAZ
ZNF341
TARBP2
HOXB3
MRPL3
UBB
SNX17
EIF2B4
CRLS1
VILL
ACOT1
EMP1
SLC51B
RPL23A
PCK1
NDUFS7
SDHAF3
VIPAS39
AHSA1
DAGLB
STAT1
PLEKHM3
ZNF248
ANK3
ALKBH3
MRPS14
PRPF18
PPIP5K2
GIN1
BMF
EIF3F
TTBK2
RRN3
RPS7
NCOA3
ARHGDIB
TSR3
GNPTG
KIF3B
TOB2
KBTBD8
G3BP1
ZNF721
PIGG
ZNF770
PLD3
C19orf47
AP3B1
HERPUD2
SLC18A1
C17orf75
SIRT4
SLC33A1
TMEM199
POLDIP2
COX16
PLEKHG6
NR1H3
CFAP20
ACP2
HACD2
DYNLT3
MARCHF8
JMJD1C
GTF2H2C
GTF2H2
TNFAIP1
RNF7
IFT20
FRA10AC1
MPZL3
SREK1IP1
SCAND1
SC5D
CWC27
ARHGAP27
LMO7
INTS6
CHKA
ATXN2L
CASP4
TACO1
UBAP2L
C1orf43
PDPR
ARHGAP45
CCDC59
ELP3
ZSCAN32
ZNF174
NODAL
SNX19
MANSC1
TBRG1
PIGU
SH3D19
TFRC
IFRD1
MOB4
COL5A2
MMP15
H4C4
TBL1X
ATP2B4
RAPGEFL1
NDUFC2-KCTD14
NDUFC2
FASTKD1
SF3B2
GSTO1
TMEM123
SLC25A16
NR1D1
ARIH1
HOXB9
YAP1
MYL6B
EPC2
CKAP5
RPL37
RANBP2
CTDP1
ZNF384
BUD13
ARMH3
TMEM242
SLCO2B1
SH3RF2
PRRC2C
KDM1A
POLD4
PKP4
OGDHL
KBTBD7
GULP1
ZFP62
ZFHX3
SNRPC
PBLD
HNRNPH3
DGCR6L
AKAP9
TMEM167B
INTS5
KRR1
ZCCHC8
SUPT7L
SLC4A1AP
GSK3A
ADGRE5
MTF2
NEURL2
MED23
DNASE1
CTSA
C11orf65
TSSC4
USPL1
HMGB1
SURF6
FAM227B
DTWD1
CALML4
TSEN15
ABT1
ZNF510
SP2
SMUG1
RALGAPB
MBTPS2
SMIM30
SCAF1
PLIN2
SPRED2
ADGRG1
STK31
TEAD4
WDR89
SLC25A36
EHBP1
AAR2
RNF145
MRPS33
LIMA1
LTN1
RAB5B
INTS12
GSTCD
CLPB
DENND4A
ARFGAP1
CTSB
PPIL1
SLC30A6
LIN37
DSTYK
CUL7
ANKRD13D
MTG1
MAF1
FANCD2
KIFBP
STT3A
NMNAT1
LZIC
LASP1
HSD17B4
COPS7B
CHCHD3
BLOC1S6
ARL8B
AGR2
MITD1
ZNF749
POFUT1
PLAGL2
BOLA1
ARHGEF28
AQP11
RBM25
RTTN
TYMSOS
TYMS
DPY19L4
VTA1
NMBR
HOOK2
EXD2
CLDN12
FURIN
CCDC88A
GTF3C3
OGT
SYMPK
WDPCP
PRORP
PPP2R3C
NAGK
MDH1
FOXA3
SLC46A1
OTUD6B
ATP5MF-PTCD1
ATP5MF
IDH1
TJP3
ASMTL
CRBN
SF3B5
RCE1
PRDM11
SELENOP
VPS50
HEPACAM2
RPS3A
DIDO1
CLEC16A
OPA1
CYCS
SAR1B
PLEKHG1
NRBF2
DMAP1
CDC42BPA
BAX
ATL3
PPIL3
NIF3L1
GTF2H2C_2
KLB
RAB5IF
FITM2
PDSS2
POLR2J3
PSAP
GTF2IRD2B
APOLD1
NR0B2
DCTN3
RHEB
ZNF212
RTEL1
ZNF337
RPL24
LY6G6D
ETV4
ARID4A
NOSTRIN
OGFOD2
OIP5
NUSAP1
ZNF577
ZC3H15
TMEM97
IFTAP
ZW10
ZSWIM3
ACOT8
TTC36
TMEM25
PPP1R12C
CREBL2
HOOK1
RSAD1
MTIF2
FGFR4
EIF1AD
CLTC
BANF1
OTUD7B
TMED5
SHANK2
CCDC18
SEC23A
AMOTL2
TMEM230
ZC3H6
KANSL3
STAU1
RALGAPA2
NPHP1
FOXN3
TRIM15
SNX5
MGME1
MKRN2
ZNF622
PPME1
C2CD3
UQCRFS1
RESF1
ORMDL3
JTB
FAM98B
TOP3B
TBC1D19
NOTCH2NLB
DDX46
CMTR2
CTU1
TAMM41
PUS7L
IRAK4
CIZ1
CCDC186
YAE1
GTF2IRD2
LATS2
DDX19A
CNOT1
CCAR2
TES
ZSWIM6
KDM5B
SRCAP
PALD1
LOC730183
LGMN
CALM1
ZBTB20
PEX12
MRPL40
HIRA
WDR74
YWHAZ
BMPR1A
ZMPSTE24
PSMD3
MRPS15
SCNM1
LYSMD1
AURKAIP1
SLC24A1
MRPS17
INTS14
G0S2
AMACR
ZNF805
ZNF233
RTRAF
LARS1
C2CD5
PIBF1
DIS3
HUS1
RNF43
SERTAD3
CSTF1
AURKA
TMEM176B
TMEM176A
RNF34
RGMB
OVCA2
GTPBP10
EIF4EBP2
CYP51A1
ATP5MC1
CCDC15
ATP5MPL
ARNT
ANXA4
P4HA1
SELENOH
NDUFV1
SSBP2
SNRNP70
MRM3
GLOD4
FNIP2
EPC1
DYNC1I2
CLP1
CEP350
IST1
ZNF317
ZNF211
UGGT1
PAAF1
GPRC5A
COA4
EIF3D
RPL27
WDR33
MZT1
BORA
MCTS1
SORL1
SRP9
PKIB
WDR75
TSC1
RPTOR
MT1F
MNAT1
KLHL12
HNRNPAB
GOT2
GFI1B
CCDC150
CEP120
ZNF235
USP3
MRPL16
B4GALT7
HNMT
HIKESHI
RPUSD4
REXO2
RBM6
PICALM
FAM118B
RAB30
HBS1L
UGT2B7
METTL3
TTPAL
TIMM23
PPP1R12B
MVB12A
GATAD2A
CCNT2
TRIP4
ZNF565
ZNF146
SRPRB
OXSM
NGLY1
LYPLAL1
CCNDBP1
ZNF17
SPRING1
SFR1
RNFT2
SH3TC2
WASHC2A
LDHA
YPEL5
UCHL5
UBE2V1
RO60
MTERF1
EIF3K
DNM1L
COA1
ZNF26
UBA52
STAG1
KIAA1586
DEF8
KHSRP
SKIL
YTHDC1
NLK
FSTL3
AP5Z1
TGOLN2
RNF214
PCSK7
HTRA2
HMGCR
ID1
KMT5B
ZNF292
PCNA
NECAP1
MRPL10
LRRC46
GGCX
DLAT
DCLRE1C
TVP23B
S100A14
NOL7
MDP1
MDM2
KDM3A
CLASP1
H4C15
H4C14
FEM1A
TMEM140
ZSCAN22
TFEC
SPRY2
POGLUT3
MORN4
HSP90AB1
DHDDS
FGFBP1
MTRNR2L8
MRPS31
ZFP2
TCTA
RHOA
PPID
POMZP3
POLR1B
PHYHIPL
NUDT5
CYP2S1
COA3
CNTD1
CDC123
CAPNS1
AP1M1
SHF
BLCAP
ACVR1
CDK12
CIAO3
ZNF461
TAF1D
NUP54
CDKN2AIPNL
C11orf54
MRE11
ANKRD49
NME1-NME2
NME1
POLK
NCR3LG1
FOXJ3
COMMD2
CERT1
CALR3
C19orf44
STX18
ZBTB40
TBPL1
SPIN1
RCAN1
HDAC2
GTF2H4
NFE2L2
MYL6
THYN1
SYVN1
SPRED1
RPP14
PAX6
HTD2
GSDMD
FBH1
FAM149B1
ECD
DUS2
DDX28
COMMD9
CDC42
C2orf42
ANKRD16
ACAD8
H4C11
KNL1
IARS1
SLC3A2
PRPF6
DDX1
RTN4IP1
QRSL1
JRK
ZNF628
TCIRG1
ST3GAL6
RPS26
CREBZF
CALCOCO1
AP1G1
UTP25
ZNF518A
ZNF23
SRRM3
SGF29
NEU1
CTSC
CTR9
CISD1
ATAD3B
HAL
KAT6A
ZNF239
ZNF221
TRAPPC10
SERPINB6
CHD8
BRCA1
SH3BGRL2
COMMD3-BMI1
COMMD3
BDP1
ANAPC15
TTI2
HEXIM2
ATP5F1E
TOMM7
LRP6
UBE2Z
WNK4
ARF4
THAP12
SLC37A3
PRPF8
PAK1
NUP62
NSA2
IL4I1
GVQW3
GFM2
CYLD
CCDC66
ATF5
SMG5
ZNF544
ZNF165
ZBTB26
XYLB
PDE8A
PAPOLA
F7
DYNC2H1
ENGASE
NDUFAF5
ESF1
TXNL4B
TRAF6
SIK2
SCAMP4
RAG1
MAD2L1BP
GTPBP2
FDXR
DNAJC9
DHX38
CCDC117
ADAT3
DUS4L-BCAP29
DUS4L
COG5
VTN
PRH1-TAS2R14
YME1L1
PPRC1
ZNF56
WASHC2C
TBL3
STRADA
SMIM10L1
SEC62
RAB5C
NFKBIA
MRPS18C
MICU1
MAP3K8
HELQ
CHMP4B
NOTCH2
THRAP3
SLC25A13
PTK2B
FBXW2
CCNJ
ALPI
TSFM
ZNF219
GOLGA5
VPS37B
SP6
SMARCAL1
PHB2
OTUB1
LARP4
DLC1
DKK1
RGPD6
RGPD5
TMEM126A
TIMM22
TEN1
TAOK1
SMCHD1
RPS13
RPL10A
RGPD8
PPP6R3
GPAT3
FNIP1
DYNC2I2
ACOX1
AASDH
TAPBPL
DUS3L
ZNF33A
SRSF6
SSNA1
RABL6
PRKAB2
PLD6
NOTCH2NLC
NDUFAF1
MPHOSPH10
MCEE
KCTD18
ELP6
CHD1L
ARL2BP
ANAPC2
TSPAN8
EPCAM
CWF19L2
ZDHHC5
TUBG1
TIGAR
SKP2
RNMT
RETREG3
RAD54L2
NRDC
LMBRD2
FAM210A
ZC3HC1
ZNF230
SULT6B1
PDF
GTF3C6
COX20
COA6
CEBPZOS
CD55
BRF2
CDC14B
ZNHIT3
APOBEC1
ZNF25
NDUFA5
RPS5
THNSL1
SRPRA
RTF2
PLAAT5
NFYB
DNM2
CCAR1
C16orf46
ABRAXAS2
THAP10
LRRC49
UBOX5
FASTKD5
OBSL1
NRL
MAP1LC3B
KDM4D
INHA
FBXO31
EMSY
DCAF11
CWC15
FABP1
CLNS1A
WDR70
TSR1
TMEM86B
SUGT1
SGSM2
SEC13
SART1
RBSN
RAB1A
PITRM1
OSER1
NAALAD2
MAP2K1
KDM5A
FBXO4
FBXO22
CRYGC
CHERP
CCDC77
BUB3
CS
DBI
C2orf76
IMP4
CCDC115
HEATR1
ZNF571
ZNF540
VAMP5
USE1
SGK2
RAB11A
POLE4
PNPLA6
OSBP2
MBTPS1
AQP10
AARS2
PREPL
CAMKMT
UTP15
UBC
TTC26
PPIG
NUP58
MRPL55
ANKRA2
AGGF1
RDH11
KRT8
CLDN4
ZNF394
TRMT44
TRIM40
TOMM40