ChIP-Atlas: Target genes

Potential target genes for SOX3

Query protein: SOX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716455 | Neural progenitor cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX3's Target genes

◢ SOX3: Average

◢ SRX5716454: Neural progenitor cells

◣ SRX5716455: Neural progenitor cells

◢ SRX5716456: Neural progenitor cells

◢ SOX3: STRING

GH1
ARID1B
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MAMDC2
RGPD2
RGPD1
MTRNR2L1
MTRNR2L9
SPATC1L
DMWD
EEF1A1
SLC25A11
RNF167
TBRG4
FOXO6
RPS11
OSBPL1A
TMUB2
EMSY
DENR
IREB2
RFX1
HGS
ARL16
GRK6
GET4
TMBIM6
RBBP6
SF1
HEXIM2
AURKAIP1
FBXL19
C19orf67
DICER1
CDK12
ZBTB45
TRIM28
SLC25A25
NAIF1
DACT3
RTN4
SYAP1
C1orf159
SERPINB12
PRCC
TMEM143
SYNGR4
CEP41
CNOT3
BTG1
TP53INP1
JOSD1
GTPBP1
RSPH14
RAB36
TRMT2A
RFX4
RANBP1
HMGB1
CYTH2
LFNG
G3BP1
ETV4
BBS12
NKX2-2
GNA12
RAB5B
ETV1
ELL
CCN2
C1orf127
VMP1
PTRH2
MUC1
CHN2
PWWP2A
MEIOSIN
KNTC1
FBXO46
HES6
KIFBP
CACNA1S
SELPLG
NFATC2IP
SLC26A8
RAB30
MAPK14
SENP8
MYO9A
HNRNPL
EDRF1
TPST2
SGCA
SCOC
PPP1R15A
PLEKHA4
GRWD1
CHMP7
SRSF7
HNRNPC
ZNF414
PLEKHG1
IPO11
TMPRSS9
SHBG
PKNOX1
PELI1
FXR2
CHD2
C9orf85
ABHD17B
PDP1
ZSCAN18
C12orf71
PRMT5
TRIM2
SIX2
PFKM
CIPC
KIF5A
DCTN2
CCDC146
XAB2
RAP1GAP
PCP2
FAM185A
FAM120B
ARHGAP19
OSBPL2
SPHK2
RPL18
RNF5
C17orf77
AGPAT1
TOMM40
CFAP410
NDUFA5
FZD9
EPHB3
RTF2
PLAGL1
LRTM1
HDGFL2
DAZAP1
ASMTL
USP44
OARD1
NFYA
CLP1
WDR74
HBP1
NRCAM
RMDN3
SPAG9
GET3
FAM181A
ZBTB48
FAM227A
CBY1
MRPL34
HACL1
DDA1
BTD
AGO1
SHC3
BANP
AP3D1
ZNF576
STAG3
PRND
IRGQ
ILF3
GPC2
STAP2
PES1
MPND
SUFU
FGD4
ETFB
ACTR1A
SPDYE14
SPDYE10P
RNF31
PSME2
NAA35
LRRC45
EMC9
CENPX
CASTOR2
CAMTA1
NF2
GXYLT2
TAGLN3
IFRD2
ZNF547
TRAPPC2B
TRAF7
SH3GL1
GALM
CHAF1A
MICOS13
IER5L
HSPA13
HSD11B1L
SLX1B
SLX1A
PODNL1
MAGT1
DCAF15
COX7B
BOLA2B
BOLA2
ABHD2
PTMA
NONO
NDRG4
COX8A
CALR3
C8orf58
C19orf44
COX6A1
WDR77
MRPL24
JUP
ATP5PB
ZNF564
VPS4B
SOCS3
SINHCAF
RBM39
CROCC
CRB2
ATF2
DDR1
CRISPLD1
CFAP20
ZNF48
TADA2B
RAB5C
PGPEP1
MIGA2
CCDC96
BRCA1
TIAL1
SPRY4
PHB2
KHSRP
ESRRA
CATSPERZ
C16orf91
FEM1A
EHBP1
ZCWPW1
TMEM256
TAF13
SCAF1
RRAS
NLGN2
MEPCE
ISOC2
CDK16
TBC1D10B
SDCCAG8
RNF224
RNF208
ORAI3
MYLPF
DNM2
DBN1
CYSRT1
CEP170
TESK2
ERGIC2
UBFD1
SELENOF
RIC8B
HS2ST1
EARS2
ZNF189
SFPQ
PRKCSH
POLR3E
NUP214
MRPL50
GOLPH3L
EGR3
CCDC151
ZNF862
UBR2
TEPSIN
NDUFAF8
GFRA1
BSDC1
TMEM41B
MTF2
ING4
CEP152
ZNF548
WDFY2
PPP2R1A
LRPAP1
KRI1
KHDRBS1
G3BP2
CDKN2D
UBA52
SPC24
RAB3A
PHF23
JOSD2
GABARAP
DNAJC16
DLG4
CASP9
ASPDH
ACADVL
IP6K2
BFSP1
AFTPH
ABI2
VEZT
RNF26
PIK3R3
MYCL
KLF1
GTF2IRD2
GCDH
FGD6
CCDC181
ANK3
PPP1R12B
PCF11
KMT5C
BRD3OS
GBA
CACYBP
YDJC
WBP1L
TMX2
SRRM1
SPEM1
SIPA1L1
RPL35A
MS4A4A
MED19
IQCG
DNAJB5
CCDC116
ZNF8
ZNF775
UBE2Q1
RRBP1
PGAP2
LYRM7
INTS9
HMBOX1
DYRK1A
COPZ1
CDK5RAP3
BOLA2-SMG1P6
BAZ2A
ARIH1
ALDH3B1
ALDH2
STK32C
SMUG1
PDE4B
LRRC27
CLEC11A
SMLR1
PRTG
MEA1
ZBTB2
VPS37B
REEP6
PCSK4
HYOU1
EEF1G
CYC1
ARL2BP
ANKRD6
SNRPE
PCNX3
MAP3K11
HSPA1B
GPC4
CTU1
AP2S1
VCP
TREX1
SNX27
SKI
RC3H2
PIH1D1
NEK2
NDUFB4
MRPS23
MEI1
HNRNPD
CDC5L
CD2BP2
ALDH16A1
XPO1
RPL27
PI4K2A
EEF2KMT
BLOC1S4
AP2M1
AKT2
RSF1
PKIG
PHF12
OS9
KBTBD6
H3-3A
AAMDC
RPS8
PABPN1
DTNA
DHX8
DCAF1
ZNF3
TRMT44
TRAPPC3
SPTBN4
PPME1
PIK3C2A
IFRD1
C2CD3
BLVRB
ACOX3
ZNF195
ZDHHC5
PTH2R
NUBP1
MAFF
FAM183A
EIF4B
AP1S1
ZCCHC14
PAK1IP1
KXD1
CSRNP2
C6orf52
ZFC3H1
YIPF3
UBE4B
TSPYL4
TMEM91
THAP2
POLR1C
PCM1
MXD1
DSE
CHD6
C1orf189
B9D2
XRCC1
TRDMT1
TRAPPC6A
STAT3
SPATA24
SLC39A10
PRPF19
PPP1R37
PINLYP
NEK6
LRRC23
DNAH1
BLOC1S3
ASNSD1
ASDURF
MYADM
EXOSC5
BCKDHA
UBQLN4
TULP2
TIMM10B
SACS
RAD23B
PMM1
NUCB1
NES
LAMTOR2
KIAA0895L
ITPRIP
EIF3L
ATP5MC1
ANKRD54
ABCG1
ZSCAN20
SLC25A44
SEL1L
MZF1
EXOC4
DCLRE1B
AP4B1
ADI1
ZNF367
TBC1D31
PCIF1
ME2
LRRN1
FAM220A
TNRC18
SYBU
MYD88
MUS81
LOC100129484
DGUOK
CFL1
ACAA1
TXLNG
TUFM
TMEM139
TENT5B
SH2B1
SEPSECS
SAXO1
SARNP
RRAGA
RBM4
PSMD2
PAIP2
ORMDL2
NAA80
MYO9B
LAP3
HYAL3
HYAL1
HAUS8
GID4
EEPD1
CCT2
CASP2
ATPAF2
AP3M1
ALG10
ADK
ADAM22
TCTA
SWI5
RRP9
RHOA
PARP3
NOLC1
KLF10
GOLGA2
DIABLO
ZBBX
STMN1
SPEF1
PTP4A1
PLEKHB1
PHB
H2AX
EMILIN1
DOP1B
COX14
ATG2A
AKTIP
ACTR1B
ZNF749
WDR19
TMEM88
TECR
SND1
RPA2
PRICKLE3
NAA38
LPIN2
H4C15
H4C14
DNAJB1
CYB5D1
CHD8
C1orf21
BCL9
ANAPC15
TOR2A
SPDL1
PFKFB4
PC
NUMA1
NEURL4
LRTOMT
FRS2
EXOSC9
EIF5A
CRK
XPC
TMEM107
TEN1
SSBP2
RSPRY1
PSME3IP1
NBAS
LSM3
CTNND2
C14orf119
ACOX1
ACIN1
TBCB
RRM1
POLR2I
OVOL3
DTD2
CPA4
ABI1
WBP2
THRAP3
TCERG1
SPTLC2
SMARCD1
RNF175
RGR
MOK
LRIT1
HSPH1
ELP6
CTBP2
CDCA4
AJUBA
TSNAXIP1
TRIOBP
TNFAIP1
SLC33A1
RPL13A
RANBP10
PYCR3
NTAQ1
NGDN
NDUFB5
MRPL47
MAP4K1
LYSMD3
KMT5A
IFT20
HNRNPH1
GSN
EIF3K
DIAPH1
CCNT1
ZNF358
TRAPPC2L
SRFBP1
PSKH1
INPP5K
GALNS
DOT1L
DGLUCY
CSNK1G1
ASXL1
TMEM114
STX12
SOX6
PIK3R2
PCNX4
PARP2
LOC389895
LMAN2L
FDXR
EIF4A3
CELSR3
CDC6
CCDC61
C11orf58
BABAM1
YPEL5
WBP11
VASH2
SPATA33
POLR3H
PACRGL
MRPL45
ID3
FZD2
FAM160A2
DAD1
CRYBG2
CNGA4
C12orf60
UBALD1
TMEM52
TMEM198
TEDC1
PLEKHG2
PKD2L1
CRIP1
CHPF
CALML6
ARL17B
ARL17A
ARHGAP33
ABCB4
ZBTB37
SPATA7
RELB
QTRT2
MVB12A
LTN1
KLHL26
H2BC12
H2AC12
FLAD1
ERICH6B
DNAAF3
CCDC191
CARM1
TRIM24
SEC16A
SDCBP2
SARAF
RPS13
PTPN4
MAGI3
HNRNPUL1
HIBCH
GMCL1
ERCC1
COX7C
CCDC174
CABIN1
C9orf163
PPP1R15B
LRRC29
INTS6
DPP9
CAPN5
ARHGAP4
ZSCAN2
ZFYVE21
XRCC3
SEMA3C
PRKRIP1
MSRB1
IKZF5
IFT172
GSK3B
GPR3
GADD45A
ELAPOR1
CWC25
C1orf194
ACADSB
ZNF823
UBE3C
SP1
SNRPN
PHF1
NUP62
MTHFD1
LMNA
IL4I1
HNRNPA1
H3C15
H3C14
H2AC19
H2AC18
ETFDH
CXorf58
CEP128
CBX5
C4orf46
ATP5F1B
ATF5
TMEM47
SMPD1
SCHIP1
SASS6
RALY
PIM1
PDIA4
PCBP2
MTMR12
LOC100289561
EVI5L
DDX41
AMN1
TSKS
POLDIP3
PITX3
NDUFA6
GPR137
GBF1
CBX8
AP2A1
ZNRF3
WDR49
TSC2
RAB8B
NTHL1
DPYSL5
CNOT8
ZSWIM1
THOP1
TCF19
SH3GLB2
SGTA
PANX1
NNMT
MAGOH
GPBP1
GINS4
FBXO9
CTTNBP2NL
CILK1
CCHCR1
ZSWIM4
TMEM39B
TENT5C
TAOK2
RSU1
RPS24
PRMT1
POLR3A
PIN4
ILVBL
GRB2
FH
CCNG1
BAX
BAIAP2
B3GAT3
ALKBH5
ALDH7A1
ZNF668
ZNF646
UTP3
UNK
TSPAN13
RPS6KA5
RANGAP1
RAB8A
PPP1R16B
PHF5A
NOTCH1
NOL11
LSM4
HUWE1
H3-3B
ACO2
UQCRQ
TMX4
TMEM109
SLC35B4
RNF139
RLF
RAB11FIP3
MOSPD3
KDM2A
GDF9
CACTIN
ARMC1
ZFP36L1
TMEM160
PGRMC2
GPSM3
BCAS2
WASF1
TESK1
SLC6A6
RBM6
KANSL1L
CHMP4B
CDC40
BMF
ZNF417
ZFAND4
WRNIP1
VSTM2L
TCAIM
SSR4
RIC8A
RFC2
MYLK4
IDH3G
FGD3
C18orf21
BET1L
ABAT
SH3BP5L
ETFRF1
CRY2
CFAP94
CCDC30
C6orf89
ZNF225
TMF1
TMEM71
SPSB2
SLC4A2
PIP4P1
PHF20L1
OTUD3
NR2F1
MAP3K14
KIFC1
HSPA8
EIF2AK3
CDK5
BTN2A2
ZMAT2
STYX
RBM23
RBBP9
NCAPH2
LMF2
INTS4
IBA57
FN1
FIGN
FAM200B
ETV5
CDC25C
TLE4
TIMM13
RPS3
RMND1
RBM15
NECTIN3
LMCD1
EP300
CCNH
ARMT1
ALG10B
ZNF474
ZBTB5
SUPT5H
MEGF8
LRFN3
H2BC4
H2AC6
ZNF324
TPCN1
TAB1
SLC25A19
PPP2R2B
PNKP
MYH9
MRPS7
KLHL15
IQCD
HP1BP3
GGA3
FOSB
FAM219A
EHD4
DNAI1
BTRC
AGFG2
TOM1L2
TFE3
SYNCRIP
SKA1
RPL34
PIF1
MED25
LRIG1
LAMTOR4
FUZ
FDPS
DRC3
DDOST
CLIP1
CCDC81
APOLD1
ZNF787
ZNF44
TICRR
THAP5
SHC1
RPL22L1
NWD1
NDUFAF5
NAPA
MRTFA
ITGB1
GLO1
FRMPD2
FAF2
ESF1
DNAJB9
CKS1B
CEP85
CCDC9
CCDC169-SOHLH2
CCDC169
BCAS3
ZNF286A
ZBTB40
WDR81
UMAD1
PTPN6
PNRC1
MUC20
MCM3