ChIP-Atlas: Target genes

Potential target genes for KDM1A

Query protein: KDM1A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4901027 | SET-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM1A's Target genes

◢ KDM1A: Average

◢ SRX254613: HeLa

◢ SRX254619: HeLa

◢ SRX254624: HeLa

◢ SRX3271002: hESC derived pancreatic cells

◢ SRX3271003: hESC derived pancreatic cells

◢ SRX3271008: hESC derived pancreatic cells

◢ SRX3271009: hESC derived pancreatic cells

◢ SRX3271015: hESC derived pancreatic cells

◢ SRX3271016: hESC derived pancreatic cells

◢ SRX3271021: hESC derived pancreatic cells

◢ SRX3271022: hESC derived pancreatic cells

◢ SRX3271026: hESC derived pancreatic cells

◢ SRX753146: iPS cells

◢ SRX116430: K-562

◢ SRX186766: K-562

◢ SRX4493020: K-562

◢ SRX4493021: K-562

◢ SRX1133785: Kasumi-1

◢ SRX1133786: Kasumi-1

◢ SRX1133787: Kasumi-1

◢ SRX543183: Keratinocytes

◢ SRX6384905: Keratinocytes

◢ SRX6384906: Keratinocytes

◢ SRX6384907: Keratinocytes

◢ SRX6384908: Keratinocytes

◢ SRX1098752: LNCAP

◢ SRX1098754: LNCAP

◢ SRX387194: LNCAP

◢ SRX3265284: MCF-7

◢ SRX3265285: MCF-7

◢ SRX3833324: MCF-7

◢ SRX3833328: MCF-7

◢ SRX3265286: MDA-MB-231

◢ SRX5233154: MKL-1

◢ SRX5233155: MKL-1

◢ SRX890395: NCI-H526

◢ SRX890396: NCI-H526

◢ SRX3461646: OCI-LY1

◢ SRX3461647: OCI-LY1

◢ SRX1556106: PC-3

◢ SRX1556107: PC-3

◢ SRX527430: PC-3

◢ SRX4901016: SET-2

◢ SRX4901021: SET-2

◣ SRX4901027: SET-2

◢ SRX4901032: SET-2

◢ SRX757045: SH-SY5Y

◢ SRX757046: SH-SY5Y

◢ SRX1133779: SKNO-1

◢ SRX1133780: SKNO-1

◢ SRX1133781: SKNO-1

◢ SRX4609169: SU-DHL-4

◢ SRX7100371: SW 480

◢ SRX7100372: SW 480

◢ SRX7100373: SW 480

◢ SRX387195: VCaP

◢ KDM1A: STRING

ZFP36
PLEKHG2
VILL
FAM117B
POLR1B
PPM1M
TWF2
TRMT61A
CKB
SP7
IKZF1
C14orf93
SAMD1
C19orf67
UBAC1
ZNF148
GNB1
TENT5C
ZNRF1
CNOT3
ICAM2
PRR29
MSL1
DUX4
MAMDC2
MAD1L1
NUDT1
MRM2
PPP3CA
UBE2J2
SCNN1D
RNF103-CHMP3
RMND5A
NCF4
ZNF865
ZNF524
FIZ1
ARSA
CST3
PRR12
HACD3
TMEM204
PTK2
TPSAB1
TPSD1
SAP30
PKN1
HORMAD2
LOXL2
SMG7
TFDP1
BTN3A2
TMEM74B
PLA2G6
EPHA8
PLCXD1
METRNL
ITGB2
CEP295NL
TSPEAR
KRTAP10-12
OR7E24
TMEM248
CBX6
GJD3
WDFY1
ARID1A
OXSR1
SKIDA1
MLLT10
NCOA6
GSE1
SUMO3
UBE2G2
OSGIN1
UCN3
DPF1
PBX3
TBX10
ACY3
KLHL32
TTC9B
CCNP
PODNL1
AKT2
KMT2A
PPFIA3
C19orf73
LIN7B
LMLN2
CEBPE
ERFE
POU6F1
LOC102724770
DGCR6
ZMYND11
CLN3
APOBR
RAP1GAP2
TMEM63B
MRPL14
CDC42EP4
RCOR3
MAP3K4
HPCAL1
ASAH1
NACAD
PIM3
GPC4
SECTM1
DYRK1A
KMT2C
RARG
MAP2K7
PRKCSH
CCDC151
CEP72
RGL3
UNCX
F10
OR2T1
DAPK1
PLEKHN1
KLHL17
RAB40B
CTDSP1
NDRG1
ZBTB18
PELI3
SLC19A1
THUMPD2
RHBDF1
MPG
SH3BP1
TBC1D22A
PAK1
BAZ2A
RAP1A
IGFBP4
SAMD14
EFHD1
SUSD5
HOXA9
HOXA10
HIP1
ERFL
KPNB1
PDE4A
PODXL
NOL4L
HIVEP1
MEF2A
HACL1
BTD
RMND5B
SLC16A3
CMTR2
ACVR2A
TSPAN31
AGAP2
PRRT2
MAZ
CDK4
AHCYL1
PAGR1
PCID2
CUL4A
PNCK
SLC6A8
PDXK
ZNF773
DRG2
C6orf47
APOM
BAG6
SHANK3
IER5L
ACKR1
SWSAP1
EPOR
TIGAR
CCDC57
GRTP1
BCL7B
TCTN3
FBXO11
ESPNL
LPAR5
KXD1
MAFF
CRLF2
CCDC200
ARHGAP28
ZNF195
TNNC1
UGCG
TRAPPC5
MCEMP1
SEMA3G
ACSF3
TRMT1
NACC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RASGRP2
C22orf34
RPUSD1
CHTF18
SPN
ZNF335
DNAJB12
ATXN7L3
NPAS4
MIDN
TET1
ZNF287
ZNF419
ZNF772
SPRED2
ZFAND5
EPB42
ASMTL
TAF6
MBLAC1
CNPY4
UBALD1
MPV17L2
RAB3A
PAFAH1B1
ADAR
POLD1
GSK3B
SAMD12
RAB1A
SLC2A4RG
LIME1
TMEM101
PYY
NAGS
TMEM143
SYNGR4
RCOR2
NPW
SLC9A3R2
BTN3A1
PKDCC
PTPN9
EIF2S3
TELO2
PTX4
VANGL2
ZNF821
FNDC3B
CCDC69
PRKACA
TMEM161A
ANGPTL4
PBX1
PDE4DIP
ZBTB2
GPR3
SLC43A3
PRR7
HNRNPL
SPATA5
NUDT6
ADCY6
PAM16
UBAP2L
C1orf43
CDC42BPB
SAMD4B
GMFG
CGB2
CGB1
CGB5
USP34
HPS4
SRRD
TUT4
VPS37D
SETD7
GOLGB1
DOC2A
ZNF331
UBE2O
AANAT
MMEL1
H4-16
H2AJ
SCRT1
FAM207A
PHRF1
MSANTD2
LRTM2
IFT46
ARCN1
KANSL1
SH2B1
PI16
COL9A3
CPNE5
SYT11
GON4L
CD7
ARL4D
RGS17
NOS3
GOLPH3L
FOXP4
KPNA3
SCARB1
COPS3
KRTAP5-7
SPTAN1
SPATC1L
TNIK
TRAPPC3
MAP7D1
MTA3
HDAC7
RASA4B
BRAP
ACAD10
ID3
NPIPA1
ZNF444
FOLR1
WDR74
STX5
MTRNR2L2
MSH3
DHFR
MTRNR2L1
OSCAR
NDUFA3
MTRNR2L8
RFX1
KIF5C
PWWP2A
SLC29A3
FXN
NLRX1
LPIN1
AHCY
EAPP
CACTIN
SETD1A
ORAI3
ZCCHC14
PAK4
USP35
KCTD21
NUCKS1
FRG2C
VIM
NBPF1
MUC3A
RGPD2
HSD17B1
COASY
RGPD1
ZDHHC12
SGSM1
MKNK2
COL23A1
PSMD9
HPD
CLPB
CYRIB
GFI1B
UBFD1
EARS2
SPATA2
MLX
ZNF852
PIGBOS1
PIGB
TKT
PRRT3
GPR84
SOGA1
VARS2
GTF2H4
DUSP1
UBL5
ERCC1
IBA57
ZDHHC24
ACTN3
OLFML2A
TDRKH
NR6A1
CPPED1
TIMM9
KIAA0586
PHF19
PRR5L
PPIA
PGPEP1
TRIM48
RAB4B
MIA
TJP3
TSC1
CFAP54
CTPS1
EHBP1L1
DIO1
S1PR4
NCLN
ZEB1
RAB42
MEGF9
ATF3
INAFM2
PLXNA1
FBN3
ZNF77
CHST12
RASA4
GPR107
NAE1
PHC2
PDLIM7
NBPF15
KLF1
GCDH
DNASE2
SIRT4
COMMD9
ARHGEF1
SPHK2
RPL18
CD79A
RPS14
LUC7L2
TCIRG1
NDUFS8
ADGRE2
ZNRD2
FAM89B
FLOT2
DHRS13
PHF21A
SLC25A22
PIN1
SPDYE14
SPDYE10P
CASTOR1
FAM83E
PPP1R13L
POLR1G
MICALL2
PRPSAP1
ZFAT
EXD1
CHP1
FMC1
UBE2L3
SNUPN
ZNF687
ATP6V0D1
AGRP
FMC1-LUC7L2
PRMT1
PNPLA6
SORBS1
TNFAIP8L1
METTL14
OAZ2
MRPL11
SPDYE7P
POM121
FOXA3
SYMPK
PTPN2
VPS37C
PITPNM1
CDC42BPG
FBXL19
DAZAP1
ARID3B
BOD1
SNX16
AKNA
LSR
TLE2
FNBP1
SHFL
PKD2L2
TNFRSF1B
NOL3
GBA
ART1
SERPIND1
LIPE
PLIN3
TSPOAP1
ABHD1
CASTOR2
AP2S1
ZSCAN25
ACTRT3
CLK3
SYNJ2
GAMT
IMPA2
IRF2BP1
MED11
PPP1R7
PASK
TMED9
UCKL1
CEND1
EFNA4
CGREF1
LRRIQ4
LRRC34
YPEL3
TBX6
PMVK
EBI3
TFB1M
GRK6
B4GALT7
TCF3
RABEP2
PAF1
MED29
ENO1
FCGR1A
GOSR2
ARHGAP35
ATG16L2
PRX
CD19
TADA1
ZSWIM4
PTPRN2
PIP5K1C
FRG2
DEAF1
TCEA2
SEPTIN9
NRXN2
ADGRL1
MTRNR2L9
EPS15
CDC25B
H6PD
SETD1B
AMZ2
TMEM115
SLC25A25
IQSEC1
WASF2
KYAT1
NNAT
BLCAP
SLC35B1
GADD45B
TMEM258
FEN1
CMIP
SULT1A4
SULT1A3
FCHO1
RGS14
TTBK1
SLC38A10
BRF1
TAF12
RBM47
TMEM120A
KIAA0895L
CSE1L
RXRA
SH2D5
FAM71E1
EMC10
TRIOBP
SLC39A13
ZBTB6
RPP25
RC3H2
SRPK1
SIL1
RABL3
GTF2E1
BHLHA15
USP48
INKA2
PRSS33
MEST
NOTCH2
TLE6
DRC7
NPRL2
CYB561D2
HNRNPF
UNK
H3-3B
KNL1
BANP
COX7A2L
REXO1
LRRC25
RAP1GAP
CASKIN1
KANK2
SRXN1
FZR1
SSH1
MYNN
CNOT1
TGM1
RABGGTA
NFYC
PDRG1
ZNF606
TMEM80
ADAMTS14
TPM4
STX10
IER2
ARRDC2
CCDC22
CACNA1F
DDX20
CENPB
NEK6
EXOC3L1
E2F4
TRIM26
TIMP2
MRPS5
KIF16B
GRPEL2
ZNF747
CORO7-PAM16
CORO7
NRROS
HDGF
SREBF1
S100A13
S100A1
CHTOP
ZNF764
ARHGEF3
ING3
NR1H2
ZMIZ1
SPTBN4
MAD2L1BP
DPP3
DUS3L
ATG16L1
ST6GALNAC6
EFR3A
ZCCHC4
CRYBG1
ADA
CIZ1
TXNL4A
MRPL54
APBA3
ATP5F1E
SCN1B
NOC2L
OPA3
SOD2
FAM187A
SLC44A2
PCIF1
LRRC8A
ZNF582
ATP6V0E2
AVEN
ADRM1
CPEB4
MTHFSD
ICE1
TESK2
NDUFB4
MMACHC
LDLRAP1
HPN
ATE1
RFC1
HSD3B7
ACTA2
CLP1
FBXO21
ARL17B
BCL9L
PPP5D1
CALM3
CCDC88A
MAP1S
PARP16
DNAAF3
CROCC
WDR37
IDI1
PBX2
GPSM3
TMEM107
PLCD1
HPS6
ARMH3
APLP2
TRIM59
CCDC130
CDCA3
GNAI2
NEMF
GNAL
GSN
CIRBP
DHRS3
HLCS
ELAVL3
LOC100287896
LIPT2
JAM3
TAF6L
DOHH
DNMT3B
RGL1
P2RX6
TUFM
PDE4D
SLC35E2B
PTPRA
LMTK3
IPO13
B4GALNT3
TTI2
TSNAX
TBC1D2
IL4I1
GPR137
HSP90AB1
CBLL1
PMF1-BGLAP
PMF1
PIH1D1
ALDH16A1
KLF2
PACSIN3
SMCO4
FBXL16
BAK1
IQCE
SNX17
EIF2B4
MRPL24
CSF3R
FAM110A
MVK
FEM1A
C19orf25
AP2A2
SPECC1
ANAPC15
SLC25A20
CASC3
CIC
RPS29
HMBS
NOXO1
BBC3
CNTRL
PRRC2B
DNMT1
GTPBP2
MRTO4
LCN12
FBXW5
EMC1
C8G
PLEC
H4C12
PNKP
DNAJA3
SIRT5
DYNC2I2
ANKRD13C
TXNRD1
LAMTOR1
PICK1
ZNF414
UBQLN4
RAB25
LAMTOR2
EFTUD2
CCDC103
TNNI3
RPL36
TEN1
ARFGAP2
ACOX1
MCAM
ERRFI1
UQCR11
KHDRBS3
TTC38
PKDREJ
THEM6
PFDN4
C1QTNF8
YDJC
KDM8
H4C3
C1QTNF6
MTRF1
RAB34
KISS1R
ZMYND15
CXCL16
UROS
CBFA2T2
BCCIP
ID1
KAZALD1
KIF3B
INCA1
POLR3B
SNX15
RPLP2
MYO18A
CEBPG
KNTC1
SRPK2
PDAP1
BUD31
KAT5
TOB1
TPCN1
PTRHD1
CENPO
H1-6
NAIF1
BLVRB
NBN
TNRC18
LOC100129484
PPP1R14A
TMEM243
TPGS1
DGCR8
TMEM138
CYB561A3
H4C11
RPL6
PTPN11
STAM2
SMYD3
RCC1
RABGAP1L
WDR31
H1-2
BSPRY
SYNGR3
GFER
ZNF292
MICOS13
HSD11B1L
SLC25A19
ASF1B
NPHP1
MTLN
HAGHL
CCDC78
UBE2S
TMEM205
CCDC159
PROCA1
PIDD1
C19orf48
CUL5
ZNF513
VCL
ADARB1
SPOCD1
CALM1
RBBP5
SYTL3
RAB3IL1
TMEM9
TGOLN2
NR2F6
ETFB
ARAF
SIRT1
FLCN
FARP2
ELL
C16orf95
ISOC2
PHLDA2
KIF1C
IRS2
EPOP
EML2
RNASEH2C
RASSF1
ST3GAL2
SVBP
ERMAP
MFSD4B
H4C14
TMEM91
NUDT15
EPB41L5
ZMYND10
ALDH4A1
VPS52
RPS18
B3GALT4
PCOLCE
MOSPD3
SERTAD1
LMNA
H2AX
MBD1
CALM2
TM9SF4
TIGD1
EIF4E2
ALDOA
ATG4C
ALAD
RPL23A
H3C15
H3C14
ARPC5
TIMM13
EZH1
SUPV3L1
NPR1
ILF2
FBXO46
PSMG2
NRARP
NOP53
GGA3
SH2D3C
RBM8A
TMED1
RPL19
PEX14
DFFA
TMEM38A
SMIM7
CZIB
POLR3GL
LIX1L
ANKRD34A
SETSIP
BTBD8
RARA
RPL7
RDH10
SRCAP
LOC730183
KDM7A
SYNGAP1
PXN
SEC16A
GGA1
C9orf163
ZC3H6
TIPARP
TIMM21
FBXO15
H2BC15
H2AC15
AOPEP
ANTKMT
ADK
DPAGT1
CARD8
ARID3A
CDK8
GPAM
SMN2
SMN1
ZNF436
TNFRSF1A
LIMS1
PPP6R1
C16orf91
RILPL1
MRPS7
MIF4GD
BIRC2
TEX46