ChIP-Atlas: Target genes

Potential target genes for KDM1A

Query protein: KDM1A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4609169 | SU-DHL-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM1A's Target genes

◢ KDM1A: Average

◢ SRX254613: HeLa

◢ SRX254619: HeLa

◢ SRX254624: HeLa

◢ SRX3271002: hESC derived pancreatic cells

◢ SRX3271003: hESC derived pancreatic cells

◢ SRX3271008: hESC derived pancreatic cells

◢ SRX3271009: hESC derived pancreatic cells

◢ SRX3271015: hESC derived pancreatic cells

◢ SRX3271016: hESC derived pancreatic cells

◢ SRX3271021: hESC derived pancreatic cells

◢ SRX3271022: hESC derived pancreatic cells

◢ SRX3271026: hESC derived pancreatic cells

◢ SRX753146: iPS cells

◢ SRX116430: K-562

◢ SRX186766: K-562

◢ SRX4493020: K-562

◢ SRX4493021: K-562

◢ SRX1133785: Kasumi-1

◢ SRX1133786: Kasumi-1

◢ SRX1133787: Kasumi-1

◢ SRX543183: Keratinocytes

◢ SRX6384905: Keratinocytes

◢ SRX6384906: Keratinocytes

◢ SRX6384907: Keratinocytes

◢ SRX6384908: Keratinocytes

◢ SRX1098752: LNCAP

◢ SRX1098754: LNCAP

◢ SRX387194: LNCAP

◢ SRX3265284: MCF-7

◢ SRX3265285: MCF-7

◢ SRX3833324: MCF-7

◢ SRX3833328: MCF-7

◢ SRX3265286: MDA-MB-231

◢ SRX5233154: MKL-1

◢ SRX5233155: MKL-1

◢ SRX890395: NCI-H526

◢ SRX890396: NCI-H526

◢ SRX3461646: OCI-LY1

◢ SRX3461647: OCI-LY1

◢ SRX1556106: PC-3

◢ SRX1556107: PC-3

◢ SRX527430: PC-3

◢ SRX4901016: SET-2

◢ SRX4901021: SET-2

◢ SRX4901027: SET-2

◢ SRX4901032: SET-2

◢ SRX757045: SH-SY5Y

◢ SRX757046: SH-SY5Y

◢ SRX1133779: SKNO-1

◢ SRX1133780: SKNO-1

◢ SRX1133781: SKNO-1

◣ SRX4609169: SU-DHL-4

◢ SRX7100371: SW 480

◢ SRX7100372: SW 480

◢ SRX7100373: SW 480

◢ SRX387195: VCaP

◢ KDM1A: STRING

KDM1A
MKNK2
CCDC69
CHST12
ZCCHC14
FXN
SNUPN
MTRNR2L8
TIPIN
PHF21A
FCER2
MTRNR2L2
VAV1
EML2
DHRS13
NCF1
TDRD7
NCKAP1L
RGPD2
RGPD1
WDR74
CARD11
ZSWIM4
UBE2L3
DPF1
MLLT1
TPM4
CD79B
SPHK2
RPL18
NPAS4
MFSD1
TADA1
ZNF395
CEND1
RABGAP1L
LRRC34
MELTF
SNX16
TRA2A
MTPN
LUZP6
APBA3
MRPL54
SPOCD1
KEAP1
ZCCHC4
DEAF1
TMEM80
DNAJC14
GTF2H4
SLC25A51
CLPB
TMC6
PNPLA4
TMC8
ACTR3B
DDB2
FAM214A
MARS1
ARHGAP9
SRXN1
C19orf25
GBA
DBNDD1
NCK1
HLA-E
STX6
ELL
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IRF2BP1
GCDH
GOLM2
LAMP3
SPC24
ATP8B3
STS
SRRM3
ARHGAP45
JAKMIP2
PRKCE
TLE5
OSM
PDE4A
DNASE2
ADRM1
POLE2
SSBP1
TMEM130
TPD52L2
FAM160B2
AP2A2
SIRT5
ITGAL
TUBA1A
NOTCH1
RAC1
CFAP36
SLC12A4
PAXBP1
ABHD3
SSBP2
CNTRL
C5
IQCE
SPATA2
RAB7A
FOXK2
LARP1
NDUFS7
FRA10AC1
H4C3
SCAMP4
ADAT3
RAN
ZNF789
POMK
MGAT3
PMVK
MS4A1
HAGHL
CCDC78
TYROBP
MRPS10
FCHO1
TTYH3
EIF2B3
PTGR2
SLC25A15
ZDHHC24
ACTN3
KHDRBS3
LMAN2L
RFTN1
ZNF341
GADD45GIP1
PRKAG3
MYO18A
BORCS5
FGD2
KAT6A
SLC44A1
CGRRF1
C15orf62
OR4F17
SLC35E2B
FLCN
USP13
LCMT1
PRRT3
PIGW
MYO19
FBXO31
CRB2
RNF7
ENOSF1
STIP1
SLC39A3
SH2D5
ZNF184
ACTA2
CTNNB1
ZNF398
LUC7L2
ALG8
TAF1C
ADPRHL1
KBTBD6
GPR160
IL12RB1
PPIL3
NIF3L1
EXD1
CHP1
BCL9L
RB1
CCDC88A
BCAS4
MTMR9
DAND5
DMAC2
GARS1
SMARCC2
SLC25A20
NTAN1
KRAS
ZSCAN25
PDCL
HUS1
ZNF443
CCDC130
MMACHC
SMN2
SMN1
PDRG1
HDAC1
SPATC1L
PIAS4
TMEM14B
NFILZ
ALDH3B1
RCOR3
SLC25A39
CTC1
PIH1D1
FAM98C
EZH2
NUP107
KLHL17
L3HYPDH
SEMA4B
POLR2J
ANKLE2
CYB5R3
ZNF500
TDRKH
ARID3A
OPRL1
FAIM
SLC35E2A
CDAN1
RGS19
PAFAH2
HMBOX1
INTS9
C19orf71
INAFM2
FAM83D
SLC39A13
ARCN1
ZNF687
IKBIP
CCDC88C
FBXO22
SLC2A1
KIAA0895
PTCD1
CPSF4
FAM220A
ANLN
CHMP6
AMN1
ALG10B
KMT2A
PDE8A
ATF1
RWDD2B
PSMD9
HPD
RHBDD2
SLC25A16
GAPDH
TMED9
H4C11
STX18
ZNF594
PIN1
RAB11FIP1
MAFK
CYRIB
RPS29
ZNF638
VPS52
RPS18
MRPL34
CDC16
ATP6AP1
MRPS5
MTF2
ACVR1
EMC4
PPP1R9B
SMARCD2
MED23
NAA35
PXMP2
POLE
GSTA4
ZNF786
FBXW8
HOXA1
EI24
ILF2
CRCP
FAM83G
WDR43
JUP
CCDC146
EYA3
THUMPD2
E2F1
TIMM9
KIAA0586
DEPDC5
TAF8
RPS6
DENND4B
EVI5L
POMGNT1
POC1B-GALNT4
POC1B
RBM28
APOL6
ABCC5
TROAP
C2CD5
INTS8
SOX12
FBXO48
APLF
GGA2
LY96
RNF114
ARNT
SLC29A2
UBB
RPS15
CCNT1
UBXN8
GYG1
LSM14B
PMEPA1
ZNF770
ANAPC11
ALYREF
CASTOR1
SMG8
HIBADH
ZNF740
CSAD
AKR1B1
LAMP1
H4C12
ZNF699
AXDND1
NEDD1
CLCC1
DPP9
LOC283710
HMGA1
ZCCHC3
FBXW5
C8G
TMBIM6
ECT2
ZFP69
H4C14
H4C15
ATG4D
TACC1
PUM3
KLHL32
BPGM
SNRPC
MTERF1
IQCG
RPL35A
MVB12A
CHMP1B
SNX8
KCTD18
SKIL
GRHL1
ZNF335
OSCAR
NDUFA3
RFX1
KXD1
PWWP2A
SLC29A3
UBE2O
AANAT
NLRX1
SWSAP1
AHCY
NACAD
CACTIN
FAM117B
SETD1A
PAK4
USP35
KCTD21
NUCKS1
VPS37D
TWF2
SRRD
HPS4
NBPF1
ZDHHC12
SGSM1
GON4L
VIM
UBFD1
EARS2
SYT11
PIGBOS1
PIGB
TKT
COASY
TMEM248
POLR1B
PPIA
PGPEP1
RAB4B
DRG2
CPPED1
SOGA1
BTN3A2
PDE4DIP
TIGAR
GFI1B
CFAP54
TCTN3
ZEB1
ACVR2A
NAE1
MEGF9
SIRT4
NR6A1
IBA57
NBPF15
PDLIM7
TTC9B
PPP1R13L
PRPSAP1
FMC1-LUC7L2
TRMT1
PNPLA6
SORBS1
TSC1
METTL14
POM121
RPS14
PRMT1
PI16
CDC42BPG
BOD1
TJP3
PKD2L2
SYMPK
FBXL19
ARHGEF1
SH2B1
NOS3
CLK3
IMPA2
PPP1R7
TFB1M
GRK6
FOXA3
TCF3
CGREF1
GOSR2
EFNA4
FNBP1
PASK
MRPL11
TFDP1
MTRNR2L9
SHFL
RABEP2
EPS15
WASF2
VPS37C
GADD45B
SAP30
TBX6
SLC38A10
CDC25B
SLC35B1
BLCAP
H6PD
FAM71E1
EMC10
SRPK1
RABL3
GTF2E1
NCOA6
NRXN2
C14orf93
TCIRG1
EHBP1L1
USP48
SP7
ADAMTS14
RC3H2
TRIM26
KANK2
GRPEL2
RABGGTA
S100A13
ING3
NFYC
BANP
EFR3A
CIZ1
TXNL4A
ST6GALNAC6
OPA3
KIAA0895L
NOTCH2
BRAP
ACAD10
PCIF1
ATP6V0E2
MTHFSD
ICE1
NDUFB4
ATG16L1
TCEA2
ATP5F1E
DPP3
FBXO21
ZNF582
ZNF606
TRIM59
LDLRAP1
LOC100287896
LIPT2
CALM3
SOD2
ARHGEF3
ACY3
PTPRA
CCDC22
BRF1
CBLL1
CMIP
SMCO4
KPNB1
LMTK3
ATE1
NCLN
MVK
FEM1A
SPECC1
P2RX6
CASC3
ZNRF1
MRTO4
MAD2L1BP
EMC1
DYNC2I2
GPSM3
CTDSP1
PICK1
PPP5D1
EFTUD2
CCDC103
ERRFI1
IPO13
TAF6L
PFDN4
KDM8
TTI2
TRAPPC3
C1QTNF6
UROS
BCCIP
THEM6
CBFA2T2
POLR3B
SNX15
ANKRD13C
IDI1
TTC38
PRKACA
UQCR11
BLVRB
NBN
LSR
TMEM243
CIC
RPL6
TMEM258
FEN1
CNOT1
KIF16B
AKT2
TUFM
NDRG1
DNMT1
UBE2S
NEK6
RBBP5
SRPK2
ARAF
SIRT1
FARP2
CYB561A3
C16orf95
SNX17
EIF2B4
KIF1C
INCA1
CDC42BPB
ERMAP
NUDT15
EPB41L5
PRKCSH
CCDC151
CALM2
TM9SF4
TIGD1
EIF4E2
ASAH1
ATG4C
ANAPC15
VCL
SUPV3L1
CZIB
TSNAX
JAM3
TMEM138
NAIF1
RPL7
RDH10
LOC730183
SEC16A
ZC3H6
TIMM21
FBXO15
ISOC2
UBQLN4
TIMM13
GPAM
PSMG2
PPP6R1
TMEM9
GNAL
PRCC
MOV10
AARS2
C19orf48
MFSD4B
DNAJA3
CTDP1
NPRL2
CYB561D2
ZNF234
SRCAP
ARL17B
ARL17A
DNAJB12
CYLD
RNLS
PSMB1
MTRF1
UNK
RMC1
TMED1
ADAM19
COQ7
C4orf48
RASGRP2
RTTN
PTRHD1
CENPO
ARHGAP28
DOHH
ZFYVE19
DNAJC17
ZBTB21
SLF2
NUDT8
MEGF8
C20orf27
MIB2
C9orf163
MSANTD2
BTBD6
NHEJ1
ATG101
UTP11
NUP85
DNAAF3
STARD10
EIF2S1
ATP6V1D
NRROS
POFUT1
PLAGL2
CAST
APTX
TTC30A
YJU2
ANKRD36
TRMT61A
SFSWAP
DDX23
DGAT2
SEPTIN9
NRDE2
SNPH
SLC25A25
SMG9
PCMTD2
ZNF24
FUS
NEMF
LRRC37A3
POLG
COX7A2L
TCP11L2
GAMT
SARS2
MRPS12
SCFD1
SDCBP2
CTDSPL2
HLCS
FAM135A
NUP205
HSPA9
SYNJ2
CDC25C
CLTB
RAD52
DOLPP1
TIMM10
ACYP2
RPL32
RMND5A
GTPBP3
SMG7
ATXN7L2
ICAM1
GK5
FMC1
BRMS1L
TPGS2
NOL8
CENPP
PERP
POLDIP3
ZNF419
BTBD8
GGA1
ZNF471
PES1
NPHP1
TRMT112
PRDX5
HEXIM2
TTC33
EXO1
TADA3
ARPC4-TTLL3
ARPC4
PHLDA2
MED11
BTF3L4
RAB40B
FKBP8
DCT
PRRC2B
ARL2
MAF1
RILPL1
MCC
FAM53C
PTS
RPS26
CSRNP1
ZNF583
GSN
UFSP2
SPOP
ATG16L2
NDUFA4
GALNT10
TMEM161A
KIAA0319L
C22orf34
FBXO33
NUDCD1
RIC8B
NELFA
UBE2Q1
GFER
PKM
EIF2D
ALG14
MEPCE
PIK3R3
ZNF862
AP2S1
DYNLL1
ANKRD36C
HPS1
ALDOA
NREP
ZMYND11
ZNF274
TBC1D2
RAB5B
CSE1L
DCTN1
RNF187
SNRNP25
POLR3K
DGKI
ZNF835
NRL
PDAP1
BUD31
KANSL1
AP1M1
TOR1A
ACBD6
TKFC
DDB1
CPEB4
SIGIRR
LONP1
CATSPERD
IL1R1
BOLA1
ZNF773
ZCWPW1
TNRC6B
ADO
EXOSC5
BCKDHA
TXNRD1
TMEM91
DDX1
SLC66A3
ZFP1
AP2A1
HNRNPH1
ZNF565
CAMSAP2
MAP3K3
RAB3A
MICOS13
HSD11B1L
GABPB2
NAA16
KBTBD4
FBXL12
THG1L
ARAP1
SLC39A6
ELP2
FAM168A
HACD3
CALM1
RAB28
PNO1
SURF4
EEF1AKMT2
NDUFA6
TFR2
ID1
MARCHF7
WDR81
GLIS2
ADK
TMTC3
RAB14
HDAC7
CEP290
ANAPC7
CCDC90B
GPN3
FAM216A
NUF2
SCNM1
LYSMD1
SCN8A
WARS2
IFRD2
DUS3L
PPP2R1A
PIK3R2
CEBPG
HPS6
BORCS7
LAMTOR2
MLF2
CEP76
SUCLA2
RAB3IL1
APRT
CCDC200
BRPF1
TIMM22
INO80C
ILVBL
PDLIM1
NDUFS3
CDON
CDC42EP4
HSP90AB1
UBE2J2
MYPOP
JMJD1C
CDYL
DGCR8
ZNF76
TMEM237
PCCB
SAYSD1
ZNF579
INO80
TTC30B
PAK1
POLR3F
DZANK1
SGF29
PHRF1
CELSR2
ZNF2
ARHGEF16
RNF103-CHMP3
RANBP3
RAP1GAP
TBP
COX7C
DDIT4
PIM3
MIS12
LRP6
DERL2
TMEM115
GSPT1
MAPK1IP1L
VSTM4
TRMO
MATR3
ZBTB8OS
RBBP4
TXNDC12
PGBD2
UBOX5
FASTKD5
FAM193B
ANKRD54
ZNF300
H2AX
TMX4
ASNS
BNIP1
HEXIM1
DAZAP2
SRSF6
KNL1
KMT5B
WDR59
PSMB5
ZNF148
METTL25
CCDC59
CCDC124
ADAMTS10
PLIN3
SVBP
AHCYL2
ACAT2
ALKBH7
KDM4A
ZC3H14
THTPA
HPS5
GTF2H1
RASSF4
TAF10
PTDSS1
ST3GAL2
PIGO
TTBK1
MGAT1
ATF5
TMEM242
UIMC1
TCP11L1
FAM228B
CUL5
CCNC
EXOC2
MINK1
CYB5B
PACSIN3
EIF3C
CHTOP
SLC43A1
FARSB
TFPT
PRPF31
ERCC6L2
C15orf61
ZNF146
WTAP
CELF6
WDFY1
ACTR8
LPCAT4