ChIP-Atlas: Target genes

Potential target genes for CDK7

Query protein: CDK7
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX264463 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK7's Target genes

◢ CDK7: Average

◢ SRX1880280: Jurkat

◢ SRX398095: Jurkat

◢ SRX668243: Jurkat

◢ SRX668244: Jurkat

◢ SRX264462: MM.1S

◣ SRX264463: MM.1S

◢ SRX264464: MM.1S

◢ SRX447601: MM.1S

◢ CDK7: STRING

RGPD2
RGPD1
MTRNR2L9
MTRNR2L8
MTRNR2L2
MSH3
DHFR
EMILIN2
MTRNR2L10
MTRNR2L1
TRIM48
MTRNR2L6
NGB
MAMDC2
C1orf198
MUC3A
WDR74
PTPN6
C12orf57
TMEM107
POLDIP3
SIRT4
TTI2
HERPUD1
H2AX
H1-3
H4C14
H4C15
H1-2
DNAJB4
H2BC5
H1-4
MKNK2
UBE2S
SAR1B
H3C15
H3C14
H2AC19
H2AC18
RCC1
H4C3
H1-6
EIF4A2
H4C12
SRSF6
BTG1
RPS9
H3C8
H2BC10
NPAS4
RPL3
H2BC4
H2AC6
CSKMT
C11orf98
H2BC11
H2AC11
H4C2
H3C2
H2AC4
H4C8
H4C11
ANP32E
PRDX1
COPS4
RPLP1
PARP2
SRSF2
MFSD11
RBM34
GADD45B
GAPDH
H2BC21
H2AC21
H2AC20
GET4
LAMP1
IER5
TUBB4B
KAT6A
SFPQ
OAZ1
WASHC2A
H3C13
H2BC18
C15orf39
WASHC2C
SKP1
PPP1R10
MRPS18B
NOTCH2NLC
MRPL39
NOTCH2NLB
NOTCH2NLA
TOB1
ZBTB4
SLC35G6
POLR2A
NR1H3
ACP2
H2BC7
H4C9
HEXIM1
H2BU1
H2AW
PBLD
HNRNPH3
H4C4
MAT2A
TUBA1C
ZNFX1
RPS27
RAB13
H1-5
H4C5
SLC9A1
GTF3C3
SLC3A2
H3C11
H3C10
RPS12
H2BC12
H2AC12
NDUFS2
ADAMTS4
CHEK1
VPS25
H3C4
H2AC7
TFRC
ERN1
RPL24
MCOLN1
ZBTB37
EEF1A1
SRSF3
H2BC14
H2AC14
PABPC4
WDR1
H2BC8
H2AC8
H4C1
H3C1
H1-1
TENT5C
RPL23
RPS3A
ZNF574
PTMA
CXCR4
MNAT1
BRD2
HSPA8
B2M
H1-10
DNAJB1
CCNC
RPS6
TATDN3
NSL1
H2AC16
H2BC13
H2AC13
ZC3H10
RPL41
MTHFD2
C12orf65
PABPC1
RPS7
SLC30A1
RPL36
MRPL30
MITD1
CCNL1
GTF2H2C
GTF2H2C_2
RPL31
SCNM1
LYSMD1
DNAJA1
APTX
TRA2A
MCL1
ZNF106
SNAP23
ZNF124
GBA
RPS3
HNRNPH1
SOD1
TPI1
PPM1G
NOTCH2
ICE2
RPLP0
SOCS1
SEPTIN7
H3C12
H2BC17
H2AC17
ARL15
PLEKHM3
TBRG4
ZBTB45
NPM1
SDE2
TUBA1B
DDX50
MRPL1
SPRTN
EXOC8
ALG10B
RPL13A
SLMAP
ACTG1
EIF4A3
CXXC1
CSRNP2
RRP15
LRP6
OAT
NXF1
RPL13
EIF4A1
SPTAN1
RPL22L1
EIF2D
ABTB1
MTF2
RPS8
HSP90AB1
RNF151
STX18
SLC25A4
H4C13
BMS1
XRCC5
MPDU1
LOC100996842
CD68
RACK1
ZNF484
SSBP1
SRSF7
INTS5
PRKAG1
POLR2J3
FUS
NOM1
RPS20
TBC1D19
USF1
NUP188
DOLK
NUF2
NOP53
IDH3B
CRTC1
JUND
HEXA
SOX4
NUDT1
MT1X
MRM2
NGRN
UNK
LAX1
EIF3G
DDX1
SFR1
LEMD2
COMMD4
RPL29
TRIM28
SGK1
UFC1
SYP
ZNF770
NDUFB5
MRPL47
ETAA1
SELENOT
DUSP1
DRAP1
C11orf68
MARS2
TOR1AIP2
TOR1AIP1
RBM28
ANAPC5
TJAP1
NUP133
DNTTIP2
RPL34
SNRPE
PRKCSH
CCDC151
ZFP36
KLHL20
IER5L
PSMB4
SSBP2
C19orf48
TRAF7
TMEM209
SSMEM1
IRF4
CCDC124
ACTB
TSPOAP1
FAM207A
TMEM18
RSL1D1
GTF3C6
GTF3C5
GTF2A1
TAF4
PSMF1
CPPED1
TTC23
TSR3
LRRC28
GNPTG
RRP1
ZKSCAN8
DRG2
SNRPC
PPM1D
NUFIP2
H3-3B
ZNF207
GTF2H2
MIS18A
TMEM238
RPL28
NUP107
MRPS18C
HELQ
RPL10A
PHB2
MRPL27
EME1
TOB2
NDUFS3
KBTBD4
DDX6
NME1
ZNF747
ADM
KANSL2
H3C3
H2BC3
ZC3H6
GTF2B
CALM1
TAF15
RPS5
INTS12
GSTCD
GNPAT
C1orf131
RPL26L1
FTL
RPS28
NDUFA7
ZFAND2B
DCP1A
RPL7L1
INSIG1
TMEM101
COMMD1
POLR1E
ELP3
NUP54
MAPK6
ADI1
ID2
ZNF830
PRRG2
NOSIP
CCT6B
PPP1R8
H4C7
H3C7
H2BC9
KCTD5
NASP
PACSIN2
RPL7A
MED22
WDR4
TOMM22
RPL5
MBTPS2
SF3B3
COG4
ALDH9A1
RAD54L2
NFKBIL1
DDX39B
ATP6V1G2
ANKRD40
RPS15A
BSG
RPUSD4
FAM118B
CCDC174
POLR3B
USP31
NUP214
EFCAB2
BRK1
ZC3HAV1
CLCN7
RPS15
INTS6
TAF1D
C11orf54
TANK
CBFB
SF3A3
N6AMT1
ZCCHC4
SEC24C
DHX9
TOLLIP
CSNK1A1
RPP25L
SUPT7L
SLC4A1AP
ATP5PO
TRIP4
CIRBP
RBM8A
USP21
RPL10
DOHH
TAF12
PRDX3
TEN1
ACOX1
SPPL2B
LSM7
TOMM7
CDC37L1
AFTPH
MCU
USE1
RHOB
VPS33B
TRDMT1
AGK
ZC3H12A
TRA2B
COPS6
KCTD13
MRPL15
MYO9B
HAUS8
TXNDC15
RPS11
YWHAE
METTL3
CRADD
PSMC6
H2AZ1
DNAJB14
METTL9
PPP4R3A
PPP1R15A
PLEKHA4
AAR2
HASPIN
TEKT2
ADPRS
GNG3
BSCL2
ATR
RBM12
CPNE1
RPL38
LUC7L3
TAB1
SNRPB
NBPF1
EIF3E
XRCC2
OSCAR
NDUFA3
EEF1G
THOC1
CD81
CCT4
POLA2
SLC38A2
SUMF1
RPL15
NKIRAS1
LRRC37A3
TSPAN17
ANKRD26
GAA
WDR36
NELFA
PNP
NDUFAF3
DALRD3
VPS52
RPS18
CDKN2AIPNL
TMSB10
CTSC
PEX3
ADAT2
EIF2B5
ZMPSTE24
BUB1
RPS14
MED18
UBL7
NOB1
KNSTRN
SNRPD1
EMC4
MRPL45
VPS72
NDUFAF5
KDM2A
ESF1
NOL11
ITPR1
TUBGCP3
RPS4X
AP5Z1
RPL27A
COMMD9
VAMP1
NFAT5
CNBP
POLR2J
RPL6
CDK5RAP2
ZWINT
SQSTM1
SPC24
PDE6D
COPS7B
GPATCH4
RNF19B
STAT1
CDKAL1
PMF1-BGLAP
PMF1
MRPL3
PPP6R1
MYH7B
GSS
TEFM
SLC25A51
DPY19L4
BPGM
LSM8
DDX5
CEP95
TUFT1
POLR3D
MTPAP
GLUL
CHAC1
NDUFA12
NSFL1C
RPL11
ANKRD31
RRP1B
KLF6
HSF2BP
AMDHD2
IFRD1
ZNF296
RPS26
RPL37
PARK7
GEMIN7
UBA2
GPN1
CCDC121
AQR
ALKBH3
ASH2L
MYC
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RPS16
AZIN1
LRRC47
SAP18
RAF1
EIF3A
TIGD5
TCTEX1D2
EEF1D
ALG1
ACYP2
TOMM40L
APOA2
UMPS
MRPS35
RPS23
RPL37A
ATP6AP1L
TMEM242
BAX
NIPBL
THOC5
DBF4B
STAU1
RAD9A
YWHAH
RPTOR
ARPC1A
KNTC1
COQ9
CIAPIN1
CEP20
SPNS1
CETN3
POLR2C
RPL23A
RAB34
DLAT
MTERF1
B3GALT4
TEX9
RPS2
RPL17-C18orf32
RPL17
GUSB
MFF
SAXO1
RRAGA
MAGOHB
KHDC4
PSMD5
GABPB2
PPDPF
DUSP5
TRPM7
CITED2
TTC26
TMEM68
TGS1
KLHL6
H4C6
GMFB
BNIP1
FAM98B
COA1
RBM14-RBM4
RBM14
SLC39A13
DDX19A
TBL3
SSNA1
HNRNPAB
ANAPC2
FARSA
CALR
RMI1
HNRNPK
ERLIN1
B4GALT3
UTP11
ACBD6
RPRD2
KLHL12
DEDD
ZNF425
ZNF398
DMAP1
USO1
LRCH3
SBNO2
PMPCB
VAMP4
UBA52
SLC16A7
NR1H2
BLOC1S6
ATF4
ZNF175
FBXO38
ACAD9
MED17
MEAF6
MAD2L1BP
RETSAT
ELMOD3
TNRC6B
P4HB
KLHL7
METTL18
C1orf112
EID1
PTPA
CRAT
TUBD1
RPS6KB1
FAM133B
RACGAP1
PTBP1
UBE2D3
CDK19
AMD1
TMCO1
MRPS9
RAD23A
NDUFB1
CPSF2
IPO8
MAML1
IFNAR1
WDR33
ATP6V1G1
AMACR
WWP2
RBM22
RAB7A
COX10
SECISBP2L
CARD8
NUP205
DDX27
TYW3
NOTCH1
CRYZ
SRRT
PPIA
DYNLL2
ZWILCH
RPL4
MYBBP1A
COMMD2
TAOK1
MTREX
IPO9
DHX29
NFX1
NAGPA
MRPS14
MAP2K7
EIF3D
COIL
GPATCH1
CTNNB1
SLFN11
PUM3
BUD13
ZNF92
TRMT44
PFKFB3
DSTYK
ACOX3
MAK16
GDF5
CEP250
AP2B1
EIF4G1
HNRNPDL
ENOPH1
SEC62
YEATS4
TSSC4
SUGCT
MPLKIP
ZNF627
TMEM199
POLDIP2
CREM
ATF6
RPL12
LRSAM1
DNA2
POLR2H
KIF2C
CLCN2
AHCY
ZNF589
SPTLC1
GRPEL2
DBT
C7orf26
ANKRD17
ZNF675
EIF3L
ANKRD54
DPY30
DHPS
SLC24A1
ZNF414
NDRG1
ATP6V0D1
AGRP
MED28
MED23
ZNF256
VTA1
RPL32
NMBR
DDX47
TRMT61B
CLK1
TCF19
CCHCR1
TMEM128
TK2
EIF4G2
CKLF-CMTM1
CKLF
TSR1
TNFSF9
SGSM2
MBNL1
FOXJ3
SLIRP
NUP62
IPO11
IL4I1
ATF5
ALKBH1
ALG10
RFX3
GORAB
UBE2Q1
KAT5
DDIT4
TOP3B
STRIP1
METAP1D
HEXIM2
POLR1H
HSPA1B
TMEM41A
SENP1
PFKM
MATR3
HNRNPA1
CBX5
ZNF148
CREBL2
BZW2
ANKMY2
RPS13
ZNF397
ATP5MF-PTCD1
ATP5MF
ATP5MC2
HMGCL
YIPF2
TIMM29
MFSD14A
MCRS1
TUBA1A
TSPYL4
DSE
C17orf75
SPRYD4
U2SURP
MPHOSPH10
MCM5
MCEE
HARS2
HARS1
RAD52
TDP2
NUTM1
NOP10
C5orf51
ACOT13
SNX18
PHF21B
RAMAC
WIZ
RPS24
PSMD2
POLR3A
DCAF10
METTL2B
USP47
PTCD2
MRPS27
COX7A2
NUP160
DUSP2
SPATA5L1
GATM
BBS1
FTH1
DCAF8
VPS4B
ID3
FANCD2
MDH1B
KATNBL1
FASTKD2
PSMB6
NPRL3
FRA10AC1
EIF2B3
DDX18
CAMK2D
TSPAN10
NPLOC4
MRPL44
MAEA
ZNF34
RPL8
PTGES3
NDUFS7
MRPL58
CORO1C
SDHAF2
LSM14A
GPATCH3
CPSF7
RMDN3
FEM1B
ZCCHC3
PAFAH2
FOXRED2
SPATA25
NEURL2
CTSA
NCSTN
COPA
ADIPOR2
LAS1L
WDR5B
HSP90AA1
POMZP3
MT2A
DYNC2I2
SRP19
PSPC1
METTL25
CCDC59
ARL14EP
PSMD8
PRMT2
TEX30
TM2D1
RBBP5
ING1
NIP7
COG8
UBXN7
NMNAT1
LZIC
PAXBP1
ZCCHC10
HIGD2B
EEF2
BBS4
CCDC125
RHOT2
METAP2
KIF11
AP3B1
NDUFA9
HNRNPM
AKAP3
POGLUT1
JUNB
STX16
ANO10
ABHD5
TRMT10C
MYL6