ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186771 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◣ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

PRCC
PMF1-BGLAP
PMF1
UNC45B
GMNN
SELENOT
PRMT2
MED26
S100A13
CHTOP
CNOT4
KDELR1
GRIN2D
ATF4
RAB11B
SETD2
MAMDC2
RPL11
H4C11
UBE2L3
H3-3B
H4C5
PPP1R10
MRPS18B
ZC3H7B
RANGAP1
MARK2
TANGO2
ARVCF
DAZAP2
H4C12
MIB2
PSMD3
LRCH4
FBXO24
TSPOAP1
MTRNR2L8
OARD1
NFYA
HSP90AB1
SOD2
ACAT2
PCNT
C21orf58
COPZ1
ISOC2
TNPO3
SRSF1
INTS2
H2BS1
PTPA
CRAT
HEXIM2
SDF2L1
CRKL
NASP
MRPL40
HIRA
H1-2
H4C14
SYF2
TRA2A
YDJC
CCDC116
ARL2
UBXN7
ZNF639
TRA2B
ATG2A
NBN
NUP214
RCCD1
MUC3A
H4C2
H3C2
H2AC4
EIF4G2
RBM22
EEF1A1
MTRNR2L2
MSH3
DHFR
KCMF1
LATS1
OAZ1
KLHL22
KAT7
PRMT1
LMNA
MORF4L1
DNAJB12
H2BC5
H1-4
MYL6
RGL2
SOD1
PNPLA2
NR1H2
PRR12
H2BC11
H2AC11
LUC7L2
PCBP2
H2BC12
H2AC12
MST1
H3C13
H2BC18
BCR
INO80D
H4C15
RABGGTA
ATP5MF-PTCD1
ATP5MF
NUP205
REEP4
MKRN1
RPL13A
PABPC4
SRSF7
HNRNPU
TRIM11
USP54
ZMYND11
PRAME
TXNIP
CCDC200
FMC1-LUC7L2
FMC1
SLTM
SERBP1
H3C15
H3C14
H2AC19
H2AC18
CSDE1
ZNF263
CEBPB
ACTB
PDCL
ZFP91
LPXN
CYTH2
UBAP2L
C1orf43
DDX5
CEP95
PPP2CA
H3C10
H2BC13
H2AC13
H2BC14
H2AC14
HMGB2
OTUB1
C6orf62
H4C3
H1-6
BCLAF1
AGPAT2
RPS27
RAB13
TMEM131
FBXW4
ACTR3C
LRRC61
PPP2R5C
BRMS1L
RHBDD3
EWSR1
H4C4
H2BC6
NFYC
GRPEL2
NIPBL
C1orf174
ACTG1
TOMM6
STK40
PAIP2
PHF8
TUBA1B
IDI1
WDR37
TMEM50A
BAG6
APOM
PRRC2A
AIF1
HERC1
H3C12
H2BC17
H2AC17
CREM
PSPN
ALKBH7
SRSF6
ATP5F1B
H2BC21
H2AC21
H2AC20
GATA5
MYL12A
ZNF143
MMADHC
PDIA4
H2AZ1
DNAJB14
DHRS12
SLC3A2
DDX19B
AARS1
UPF1
DGCR8
TARDBP
FTH1
UBC
RPL18A
RPS7
HNRNPA3
ST7L
CAPZA1
FKBPL
ATF6B
EGR1
PIGV
KMT2E
DGCR2
CIRBP
TRMT2A
RANBP1
RHD
THAP7
RPL12
LRSAM1
DYNC1LI1
MAT2A
ZNF280A
CALR
FARSA
SAP130
WDR74
ZNFX1
C19orf48
HSD17B8
SLC39A7
RXRB
GP1BB
SEPTIN5
UFD1
CDC45
MTREX
DHX29
SLC39A4
CPSF1
KHDC4
HSPA5
ZNHIT2
MRPL49
FAU
SYPL1
PHF19
WTAP
RPLP0
HNRNPUL1
SSU72
TUBGCP3
PTCD1
CPSF4
MAMDC4
LSM14A
ANP32E
VCL
SMIM29
CTCF
SARNP
ORMDL2
DYNC2I2
TBCC
BICRAL
PCNA
RIC8A
BET1L
H2BC4
H2AC6
H2BC8
H2AC8
PIGO
RPL7A
MED22
SLC26A8
MAPK14
STPG3
NELFB
SLC25A3
ZCWPW1
MEPCE
BCL2L13
MAPK1
NSUN4
CHMP2A
CCNL2
UBE2M
POLR2J3
ENSA
TCERG1
C22orf39
RBM39
NECAP2
EIF4A2
SRCAP
LOC730183
DCAF8
CETN3
MED15
TNRC6B
ZC3H6
ARIH1
SLC25A25
NAIF1
CC2D1B
EPS8L1
GABPB2
NUCKS1
CYREN
TMEM209
SSMEM1
PPAT
PAICS
VDAC2
UCP2
SERF2
H2BC15
H2AC15
WDR26
ESYT2
ERCC6L2
ZC3HAV1
TRIM27
CAP1
RPL10
PRPF38A
ORC1
CCDC71L
MBD6
DDIT3
RBM14-RBM4
RBM14
RPS13
HNRNPDL
ENOPH1
FLNA
EIF1
CTNNB1
H2AX
GPANK1
CSNK2B
C6orf47
ZC3H4
NMI
PPIL2
PNP
PCNX3
MAP3K11
NRARP
WDR13
LUC7L3
SRRM1
RPS5
SPG11
RUNDC1
PTGES3L-AARSD1
PTGES3L
ZC3H10
RPL41
STRIP2
ZNF253
RBM15
RPS16
METTL26
ZNF766
PPP1R15A
PLEKHA4
LMAN1
TSKS
AP2A1
EFCAB2
HP1BP3
MPHOSPH10
MCEE
ZNF282
HSPA1L
HSPA1A
HMGN2
TSEN34
MBOAT7
KDM3B
UBE2J1
TMEM69
GPBP1L1
RTL10
GNB1L
RPL15
NKIRAS1
COX18
PRDX1
TAF5
KANSL2
LSM12
G6PC3
ZNF687
ATP5PO
DPH7
WHAMM
FSD2
ZNF451
CALU
ZCCHC17
SNRNP40
EIF2S2
TMEM187
HCFC1
ZBTB8OS
RBBP4
JUND
ATXN2L
FADS2
FADS1
AARS2
GRK6
TMEM258
FEN1
FAM98C
NELFCD
UBE2B
CDKL3
PSMD9
HPD
CBX4
FLNC
ZNF248
ATF2
GLUL
ABCB10
N4BP2
SLC35C2
TMEM238
RPL28
SFT2D3
RNF5
AGPAT1
LRIF1
DNAJC18
FRG2
BCL6
SCYL1
STMP1
TRUB2
COQ4
BCL7B
FUBP1
DNAJB4
PDE4DIP
TRIM24
STXBP3
MPC2
DCAF6
KXD1
UBR4
ODF3L2
HARBI1
ATG13
CUL1
HMGB1
ADI1
TRAF7
OPN3
CHML
PSMD5
MTRNR2L9
POLR3E
UXT
SLC39A1
CREB3L4
CRTAP
ZNF555
MAD2L1BP
GTPBP2
DUX4
SCAND1
COQ10B
RBM8A
ARL6IP1
TOP3B
VEGFA
NACA
ZNF267
MORF4L2
PLK4
FADD
ZNF274
EED
THOC1
VIM
STXBP5
SLC20A1
DHPS
HDAC1
AURKAIP1
ELL
KNTC1
KIAA1586
CNOT3
SMCHD1
SYNJ1
NBEAL2
ZYG11A
ANO6
SRSF5
TUFT1
SWI5
GOLGA2
FERMT3
PSMD14
MUC1
WDR1
GOLGA8A
ZNF343
HECTD3
WASF2
DDIT4
UPF3A
ATP6V1B2
EOLA2
FUS
PRKRA
PJVK
DNLZ
PLCD1
RIOK3
CLASRP
ZNF326
SP3
SSB
RNPEP
ZNF850
PRKAR2B
PCK2
NRL
FTL
H4C8
TPM4
MYLIP
FCRLB
RPS20
KDM5C
VKORC1L1
INAFM1
BRD2
LSR
SLC39A6
ELP2
REPIN1
TMED9
RPL22
NUDT3
WBP4
ELF1
ANAPC11
ALYREF
NKRF
PRDX2
RNASEH2A
SYNCRIP
WDR33
SESN2
DYNC1LI2
ZMAT5
UQCR10
TXNRD2
COMT
POM121C
EIF4A1
MCM5
B2M
FNDC3B
RPL7L1
PBLD
HNRNPH3
CEBPG
SPAG8
HINT2
TARS3
PTPN23
KIF14
METTL2A
MICU1
TMC8
TMC6
PCIF1
MKLN1
P4HA1
CYCS
NDUFV3
TUBA1C
SEC16A
C9orf163
FGFR3
DUSP1
SUPT5H
SON
GART
RAB4B
MIA
SMARCC1
MORC3
RBM10
NDUFB11
H3-3A
FBXO30
CAPZA2
SIRT1
SDCBP2
SDHAF2
CPSF7
COX19
STX10
IER2
RPS9
RPS14
UBE2T
TAL1
LENG9
RPS15A
RPS3A
ZNF800
MAP1B
ZNF627
CCT2
CMPK1
CSNK1A1
ZNF398
PCF11
SND1
MAP2K2
VAPA
ZNF565
ZNF146
ZNF720
RCE1
USP35
KCTD21
DCLRE1B
AP4B1
PRR3
GNL1
DDX39B
SPEN
NRF1
ATP6V1G2
ZMIZ1
NCAPD2
MRPL51
ING1
UBE3C
P2RX6
TUBB
MDC1
SRSF2
MFSD11
ZWILCH
RPL4
RPL14
RPS26
ATAD2
MXD3
SRSF3
PTPN9
FBXO28
CEP350
RPL32
PDCD2
MRPL35
IMMT
GTF2A1
GADD45A
TANK
AKIRIN2
PPP4R3B
RPS8
SCYL2
DEPDC4
HNRNPAB
ZC3H7A
ZNF93
ZNF717
TMUB1
AGAP3
CLCC1
INF2
ZDHHC12
CUL7
ID1
UBTF
MED13
POLR2M
JMJD1C
TBX18
SPATA5L1
GATM
ZP3
CNOT6
EBF1
CAPN7
SART1
SEMA7A
THNSL1
POLR3B
ZBTB37
APTX
DNAJA1
SNX25
MAP3K1
SLX1B
SLX1A
BOLA2B
BOLA2
UTP4
DERPC
CHTF8
UBALD1
BOLA2-SMG1P6
TAF10
SULT1A4
SULT1A3
TIMM17A
DNMT1
RPS27A
CLHC1
HDLBP
SEPTIN2
CAPN2
U2AF2
RICTOR
CRADD
BNIP2
SERTAD3
PCP2
STXBP2
MTRNR2L1
H1-5
H2AC16
PAK2
SUMO2
PLAG1
CHCHD7
SARAF
MTHFD2
ZNF652
RAB3GAP1
HSP90B1
HIC2
NSMAF
TP53RK
SLC13A3
MAML1
ATAD2B
CALM2
CNOT1
GPSM3
TMEM217
TBC1D22B
ISL2
MCL1
SLC26A6
POLR3D
DSN1
SERPINB9
JUNB
H3-2
KBTBD3
AASDHPPT
PSMG1
SLC25A1
NDFIP1
USP25
XPOT
RBM17
FSCN1
MIS12
DERL2
MAPKAPK2
RPA2
ELP6
NSMCE1
ZNF74
RCC1
NAA25
GANAB
GDF15
E2F3
OTUD7B
DIP2B
RPL6
BRD4
CRY2
NOB1
AP5B1
AHI1
SP1
GPX4
RILP
EXOC4
TBL2
FAM234A
SMG9
CBX8
ZNF319
USB1
SRRT
ARHGAP35
MTRNR2L10
DCP1B
TTC9C
HNRNPUL2
USP11
SUGP1
MAU2
CASP2
UBE2H
PYM1
DGKA
PRPF38B
TMEM139
SRP9
CBSL
CBS
LIME1
POLR2J
FBXW5
C8G
SLC2A4RG
FRG2C
CPEB2
SKP1
RC3H1
USP1
ATL2
NDUFS6
MRPL36
CMIP
KLHL12
C10orf95
EGFL7
YY1AP1
DAP3
RPL10A
WDR82
TNKS
UBN2
FNTA
AHCTF1
CCNB2
GTF2I
ZNF718
SP4
ZNF100
ANXA7
NCBP2AS2
NCBP2
ZNF595
ARL1
ZNF584
RUSC1
ZDHHC5
TOP2B
LY6G6F-LY6G6D
LY6G6F
ABHD16A
RPS2
RNF151
NDUFB10
ASXL2
COX20
FAM8A1
RIMBP3C
RIMBP3B
TMEM141
CCDC183
HBS1L
NRBF2
CRTC2
HDAC6
ATP1B3
DPF2
CNOT6L
SNAI1
KLF10
HSPA1B
PIM1
RPS3
ASF1A
CLIC4
MATR3
HNRNPA0
PTBP1
DDX3X
BLOC1S4
SMIM13
HDAC7
VCPIP1
C8orf44-SGK3
C16orf95
CENPA
HEXIM1
KDM4B
MRPL15
TOR1A
ZNHIT1
PLOD3
AGAP2
TSPAN31
TPI1
IQCG
RPL35A
RHEB
PSMB5
ZNF786
UTP11
SPATC1L
GMIP
GATD3B
GATD3A
SMC4
IFT80
TOMM20
ST8SIA6
MCM7
AP4M1
FOSB
PRRC2C
TFRC
HMGN1
PABPN1
ZNF318
C6orf89
ING3
C5orf34
HAGHL
CCDC78
H4C1
SLC38A2
HSPA8
HERC4
NFKBIL1
EIF4H
PRDM2
IRF3
BCL2L12
RNF216
SSBP1
ZKSCAN8
SAFB
SAFB2
STAP2
MPND
B4GALT2
ATP6V0B
DYNLT1
ELOA
RNF19B
DDX59
BICD2
ATF7IP2
RNF187
NDE1
CCDC91
MARF1
SNAP29
PI4KA
SBNO1
TDP2
ACOT13
PPP3CB
LRRFIP2
MAPK6
MAP3K3
YIPF3
POLR1C
GOT1
SLC35E1
CBLL1
ASF1B
TMEM191B
SCARB1
RPN2
MROH8
NSD3
LETM2
RPL39