ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
IDH3B
MTRNR2L2
METTL25
CCDC59
NAGPA
MTRNR2L8
RBM19
SUMF1
TRMT1
NGDN
MRM3
GLOD4
ATG14
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
GATB
ISY1-RAB43
ISY1
MTRNR2L6
CDC23
VPS50
HEPACAM2
MRPL39
GPATCH3
MRPS18C
HELQ
TSR3
GNPTG
PPWD1
CENPK
ZFYVE26
UBE3B
KCTD10
SMG8
COPS7B
RBM48
PEX1
ZNF165
GTF3C5
MRPL1
SPNS1
EIF2D
C8orf33
LMAN2
SFSWAP
MTRNR2L1
RTTN
COMMD9
KRR1
WASHC2A
GET3
RANBP6
ZC3HC1
NDUFAF2
ERCC8
ERAL1
PHF5A
ACO2
TMEM199
POLDIP2
MED6
SSNA1
ANAPC2
TMEM41A
POLR3F
DZANK1
WDR18
TMEM39A
MRPL44
SREK1IP1
CWC27
NOC2L
BRIX1
PSMB7
SUPT7L
SLC4A1AP
NCAPH2
LMF2
TCTN2
TRIP4
INTU
TRAPPC2L
GALNS
NDUFS3
KBTBD4
PUS10
PEX13
TFPT
PRPF31
TOMM22
PPT1
XAB2
ALG1
EIF3H
DNTTIP2
TIMM22
MAIP1
BSDC1
POLR1F
C16orf91
NDUFS7
TOMM6
VIRMA
ZNRD2
MRPS15
RNF26
MTERF4
PEPD
FEM1A
CWF19L1
LARS2
MTIF2
COPS5
SAP30BP
RECQL5
FBXL12
URM1
PDCD6IP
FAM162A
CCDC58
RBM42
MRPS14
UQCC1
NUP214
BABAM1
MRPL45
NOL8
CENPP
RRP15
EIF1AD
BANF1
RPTOR
MRPL55
LRRC29
SETD3
CCNK
MDH1B
FASTKD2
PEX19
EIF3F
TMEM101
CRBN
ADPRS
BBS1
TAF3
ZMAT2
TSR1
HBS1L
LIN52
ALDH6A1
TMEM126B
DLG2
DBT
TMEM203
NDOR1
NPM3
MTBP
MRPL13
PFDN1
PMPCA
ENTR1
WASHC2C
DNAJC30
BUD23
UBIAD1
HEXA
NMNAT1
LZIC
NSFL1C
NUP160
TRIAP1
TIMM17A
BRF2
MKS1
GPATCH4
SF3B3
COG4
VPS11
SF3B2
RTN4IP1
QRSL1
CPSF1
MRPS11
MRPL46
RCE1
TXN2
COX10
MYL5
ATP5ME
YIPF2
TIMM29
MRPS22
SENP1
PFKM
IPO11
DDX23
MOCS3
DPM1
MRPL21
IGHMBP2
HNRNPA1L2
TRMO
SPRYD4
NOL11
CEP20
COX16
C5orf51
MRTO4
EMC1
PSMC3
ATP5MF-PTCD1
ATP5MF
NMT1
DCAKD
ZNF213
COMMD4
MRPL2
KLC4
METTL16
PISD
MRPS31
METAP1D
C12orf43
TACO1
QRICH1
TAS1R1
NOL9
PIGL
UTP20
TRMT61B
NUP54
KAT8
RBX1
NEURL2
CTSA
KCTD5
SUGCT
MPLKIP
C17orf75
ZFAND2A
RABL3
GTF2E1
LONP1
CATSPERD
TOP3A
SMCR8
PELP1
MFN2
TEFM
VPS33A
ZNF17
ZSCAN22
WDR74
ARFGAP2
BLOC1S1
NCAPD2
MRPL51
UHMK1
OXNAD1
DPH3
RPUSD4
FAM118B
HSPBP1
MRPL58
THUMPD1
VCPKMT
GRWD1
ATP7B
ALG11
OAZ3
SLC25A53
ZBTB45
OS9
CDK5RAP1
TATDN3
NSL1
OSCAR
NDUFA3
OPA1
MZT2A
TAF2
XPO4
STX18
TPP1
MRPL48
DNAJC11
LIN7C
FBXO28
DMAC2
VPS25
TARS2
MNAT1
POLR1H
ABT1
LAMP1
TNPO3
VAC14
PPP1R7
PASK
RNF6
KDM4D
CWC15
TJAP1
DNAJB12
WDR24
SLC25A26
ANKRD13C
WDR48
SCN11A
ERGIC2
EIF3E
TMX2
MED19
RNASEK
ZZZ3
USP54
AURKAIP1
MPHOSPH10
MCEE
ALKBH3
SLC7A6OS
PRMT7
TIMM21
FBXO15
COPS8
SLC35A3
TSN
POLR2K
SYF2
MED23
DIABLO
TM9SF4
MRPS10
DUS2
DDX28
USP30
HMGCL
NOC4L
DDX51
ZDHHC6
VTI1A
ZNF770
STX16
TRMT44
ACOX3
CSTF2
TBRG4
ZMPSTE24
SEC16A
C9orf163
XPC
LSM3
DOHH
SUPV3L1
PHB2
WDR53
FBXO45
ZNF2
TAF11
RPS28
NDUFA7
ARMC8
HAX1
DDX46
ZKSCAN4
NDUFB5
MRPL47
USP8
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
WDR83OS
WDR83
ALKBH8
SLC35B1
GCDH
WDR36
NDUFV1
FDX2
SMPD4
MZT2B
EXOSC3
EFTUD2
CCDC103
NDUFA10
SART3
ISCU
SNRPC
EEF1E1
CCDC43
SRPRA
RFXANK
BORCS8-MEF2B
BORCS8
TUFM
SH2B1
YBEY
MCM3AP
APTX
FANCD2
KLHDC4
CCAR2
ZC3H18
CDKAL1
ZCCHC4
MTO1
RPUSD2
NUF2
TRUB1
DHX35
STOML2
TAX1BP3
EMC6
LRRC8A
KYAT1
NUP155
NDUFA9
AKAP3
GTF3C3
MRPS17
PUM3
MTRNR2L3
RANBP3
METTL2A
MTMR4
UBL5
UQCRC1
MCOLN1
DPP9
MAP3K7
ZSCAN30
RPS7
TBC1D17
AKT1S1
GTF2H3
EIF2B1
ZBTB8OS
RBBP4
C12orf73
TBC1D22A
CCDC97
ZDHHC16
EXOSC1
PIGK
ZKSCAN8
TMEM11
EMC4
PEX3
ADAT2
UBXN11
ZNF205
NDUFAB1
NFKBIL1
ATP6V1G2
SLIRP
ALKBH1
UBN1
GLYR1
ZNF461
ARFGEF2
MRPL35
ACIN1
MED4
TSR2
COMMD2
SF3A3
SELENOH
PHAX
GOLGA3
SDHC
TERF2IP
KARS1
AP5Z1
WDR11
GBA
CXorf56
PWP1
NSUN4
MED27
NCSTN
COPA
MAPKAPK5
MED9
L3MBTL2
MRPL11
ZNF408
ARHGAP1
AP1G1
RTEL1
ZNF383
PTCD2
MRPS27
GOSR1
TRDMT1
IQCH
AAGAB
DLST
SH3YL1
ACP1
AP3S1
ZBTB11
MRPS7
GGA3
GCN1
CWC25
UMPS
TMEM126A
MTX1
NXT2
ASH2L
FAM32A
SMG7
ZNF561
TOP3B
UQCRB
GPX8
POLR2J2
SPTLC1
TTC31
CCDC142
MRPL53
PCID2
CUL4A
ATAD3B
TMEM230
DCP1A
MRPL20
SPC25
YIPF3
POLR1C
SSBP1
GPATCH1
FAH
ELP5
CTDNEP1
NOP16
HIGD2A
PTCD3
POLR1A
HIRIP3
MED18
GFM2
DDT
DDTL
PSMB2
MRPL4
TEPSIN
NDUFAF8
WDR4
FUZ
NUP107
NBAS
PRPF38A
ORC1
DUS4L-BCAP29
DUS4L
COG5
MTOR
SEC13
SDE2
METTL1
EEF1AKMT3
TMEM128
ITGB3BP
EFCAB7
OSBPL9
TBC1D19
REXO4
VPS52
RPS18
MRPS18A
IMMP1L
ELP4
GTF2H4
MRPL3
FAM104B
SF3B6
FAM228B
LYRM4
FARS2
ANAPC5
FAM149B1
ECD
MRPS34
EME2
SMU1
ALG10
CEP162
TMEM217
TBC1D22B
MFSD5
TMEM183A
SCAF11
TBC1D23
ATP6V1C1
MAGOHB
PSME3
SLC33A1
ABRAXAS2
POMZP3
FRA10AC1
ITGB1BP1
CPSF3
SEC11A
WASHC5
NSMCE2
DHX40
CSTF2T
ANAPC1
MIA3
TIMM44
ZNF79
GRPEL2
NOB1
SNRPD3
GUCD1
ANKFY1
ZNF195
PEX14
RAB3GAP1
MRPS35
EXOSC9
PSMC4
GPN1
CCDC121
PCNP
RUVBL1
EEFSEC
FAF2
DNAJA3
RNF166
CTU2
MRPS23
SRRD
HPS4
GTPBP10
ATXN7L1
NUFIP1
GPALPP1
ZNF721
PIGG
SPDL1
MRPL49
FAU
ANAPC11
ALYREF
SF3B5
TM2D1
NDUFA5
CHMP4A
ZNF497
SUPT4H1
NOL10
SSU72
NR1H3
ACP2
DVL2
METTL14
VAMP3
CMTR1
PNPT1
ZCCHC10
MFSD1
HMBOX1
MAGOH
DDX19A
MTRF1
CHM
AQR
NELFA
TTC26
RPAIN
NUP88
BHLHB9
FCF1
AREL1
HIF1AN
NOLC1
TBCC
BICRAL
PRR3
GNL1
SDHAF2
CPSF7
VPS41
RAD54L2
MYSM1
SAP18
IPPK
WBP1
CACTIN
NDUFC2-KCTD14
NDUFC2
EIF4B
NOL12
SDR39U1
ZNF581
GID4
ATPAF2
ZNF614
NUDT5
CDC123
ATP6V1G1
METTL2B
UBE2L3
NDUFAF5
ESF1
DNAJC25-GNG10
DNAJC25
OSGEPL1
DHDDS
OTUD6B
RPL9
LIAS
MYNN
OTUB1
ZWINT
DNAJC13
PPIL1
RBBP5
PPIL3
NIF3L1
ZNF501
TBL3
STK36
RNF25
MRPL37
CYB5RL
NME1
MED28
ATF6B
KLHL7
NDUFS4
TFIP11
NFX1
RBM23
THAP10
LRRC49
RBM28
RMDN3
MAZ
TMEM237
TOR1AIP1
EIF4G2
ARMC1
CLPTM1
DDX49
COPE
NOXA1
THOC1
PPP1R10
MRPS18B
ILF3
PRKRIP1
RSL24D1
JRK
BORCS7
B4GALT7
NDUFB3
FAM126B
YJU2
RNASEH1
ZNF292
DOLPP1
GPAM
SDHB
TMA16
TBC1D30
GNS
UTP15
ANKRA2
RPP30
TFB2M
CNST
PAF1
MED29
MRPL30
MITD1
UBE2L6
TSFM
MED21
SEC24C
BMS1
TBCK
AIMP1
ZNF426
DGUOK
FAM227B
DTWD1
COQ3
CCDC57
TBC1D15
ZNF594
ATRIP
DDX47
NKAP
THBS4
MTX3
COPS4
TIMM50
MAN2C1
FAM207A
POLR3B
GRN
AASDH
LEMD3
ZSCAN9
UBN2
ALG10B
NDUFB6
GOSR2
NCBP2AS2
NCBP2
SIRT3
PSMD13
PPAN-P2RY11
PPAN
SPC24
SERP1
EIF2A
MRPL27
EME1
WDR25
WARS1
TBCCD1
DNAJB11
VPS37A
CNOT7
CENPW
RBPJ
UBA5
ACAD11
HTRA2
NAT10
MAF1
TUT1
NARS1
GATAD1
TCERG1
ZNF3
TRAPPC4
RPS25
DNAJC2
ZNF507
DCTN6
KIF22
NUP133
CHCHD1
MESD
RPL23A
PLAA
IFT74
PSMB6
BNIP1
RUVBL2
GYS1
BRCA1
ANAPC10
ABCE1
POLR2J3
LTN1
ANTKMT
HSD17B10
TRIM23
TRAPPC13
SHLD3
DMAP1
COQ5
BLOC1S6
PFDN4
INTS12
GSTCD
SDHD
IKZF2
OXLD1
CCDC137
BRMS1
FBXW9
YARS2
RPAP1
RNF181
WDR20
HSP90AA1
ZNF579
METTL17
TRAPPC8
MFSD8
ABHD18
RPL37
IVD
ZSWIM1
ZNF181
EXOSC5
BCKDHA
USE1
GID8
DIDO1
PINX1
MRPL22
C1D
PPIG
ZNF304
VTA1
NMBR
ZBED5
PRPF6
MICU2
MTMR9
MRPS28
STK16
GLB1L
TDG
TAF9
RAD17
AK6
CLN3
KANSL2
QTRT1
EIF3K
SENP2
ATP6V0D1
SBDS
NHP2
ST7L
CAPZA1
TYW1
IARS1
CHMP2A
PEF1
GTPBP3
ABCB8
COPZ1
POLR2J
RBM8A
KDM5A
CCDC77
SRSF11
LRRC40
DPH1
PROSER1
NHLRC3
CHIC1
HNRNPH2
GLA
SLX4IP
RPS6KB2
SLC24A1
FXR1
RPL14
DCTN4
HEMK1
SAR1B
SPTY2D1
MUL1
CFAP298-TCP10L
CFAP298
STARD3
WDR61
CGGBP1
C3orf38
KLHL12
MTF2
KLHL26
NRAS
MALSU1
GMPPB
POLL
DPCD
CBWD5
PRMT5
CBWD6
CBWD3
TXNL4B
DHX38
MED1
PDCD7
ATG5
MRPS30
ZGRF1
LARP7
PLEKHM3
PURB
CCDC86
MARCHF8
TMEM216
PRKRA
PJVK
FAM98B
DDX41
PSMD4
TMEM222