ChIP-Atlas: Target genes

Potential target genes for MBD3

Query protein: MBD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1674507 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MBD3's Target genes

◢ MBD3: Average

◢ SRX1674505: HeLa

◢ SRX1674506: HeLa

◣ SRX1674507: HeLa

◢ SRX246860: MCF-7

◢ SRX1489433: MDA-MB-231

◢ SRX1489434: MDA-MB-231

◢ SRX246862: MDA-MB-231

◢ MBD3: STRING

RGPD1
RGPD2
MTRNR2L2
MTRNR2L8
MTRNR2L9
MTRNR2L10
MTRNR2L6
WDR74
DCUN1D2
SNX16
ERG
OTULIN
TEAD1
ZNF555
C17orf49
PXMP4
KXD1
ZSWIM1
IFT46
YJU2
EXOC4
C19orf53
DMAC2
ERGIC3
GSN
ZNF77
SIRT4
USP16
USP54
BNIP1
HUS1
BABAM1
TDRD7
DNLZ
NR1H2
POLR2J3
HELZ2
FITM2
C6orf89
PHF20
SLC38A7
INTS5
PSMD9
HPD
FAM32A
STAU1
DDX27
POLR2J
UTP11
DHODH
ZNF226
AARS2
ZNF772
DHX16
NDUFB7
CYB561D1
ATP5MF-PTCD1
ATP5MF
WFDC3
DNTTIP1
NBPF15
CUL9
RAB14
TIMM17A
MRPS17
BBS1
RGPD8
RGPD5
IFT81
STARD10
RGPD6
ZNF169
PRDX3
NSUN4
CUL7
TTC12
L3MBTL2
C12orf43
MRPL11
MED16
ZBTB3
PDCL
PPFIBP2
DNAJC5
MAD1L1
ZC3HC1
TOX4
RAB2B
CIT
ATAT1
DDX41
CACFD1
ULK3
SMIM12
ZNF557
TMEM97
SLC25A44
ZNF57
BLOC1S5
RPP21
RNF181
ASB6
ZNF200
TSPAN19
TBC1D13
LRRIQ1
IMPDH2
CFAP54
HNRNPH1
CHD8
WDR59
SLC35A4
APBB3
GHDC
TBC1D31
LAMTOR4
DCTPP1
CALR
ABCB8
HMBS
C1orf210
NBPF1
EIF2B2
GUSB
MORN4
C6orf226
UQCC1
TMEM161A
THOC3
PROCR
LRRC23
SEC14L5
ZNF875
FAM98A
CTNNBL1
ASNSD1
ASDURF
OXA1L
PMF1-BGLAP
PMF1
GBA
SNX8
FAM234B
TCTN2
TCAF2
CCDC107
TTC30A
IFT52
PDE4DIP
SMIM30
SLC35C2
LRRC37A3
L3MBTL1
ZCCHC4
PDCD2L
COA3
CNTD1
AAR2
C2orf74
ANAPC5
KIAA1586
CDKAL1
ZNF414
PDRG1
TP53BP1
DAZAP2
SMDT1
IRF9
CCDC130
PARP2
LRGUK
MYBPC2
SMYD3
OTUB1
ZNF579
SERINC3
ZNF585B
ALAD
TAF13
SMN2
SMN1
RRP15
HINFP
GTPBP8
DHX40
OSBPL9
HSP90AB1
COMMD2
SAR1B
COPZ1
PROSER3
NAA40
DNAJC18
NEU1
SLC26A6
SNAPIN
SLC25A16
FLT3LG
DNAH7
RTEL1
RRP9
RAD18
PRMT5
PARP3
COPS6
VPS11
ABCF3
ZSWIM3
ZMAT2
ACOT8
MICU2
SLC36A1
PTCD2
MRPS27
HM13
VPS25
PIGO
NECAP2
CAPS2
KCTD7
KAT7
FAM200A
C1orf74
ALKBH8
PLPBP
WDR18
TTPAL
MAD2L1BP
ZNF416
TIMM50
OS9
DUSP12
CDC23
FAM227B
DTWD1
TRIT1
IFTAP
WDR36
KNSTRN
PCYOX1L
NDUFA5
CFAP69
TMEM205
SEC14L1
MRPS10
CCDC159
RDM1
KDM8
TSFM
BRF2
TTC1
PRR13
PRPF18
GATAD2A
EZH1
TTC26
NUP54
TMEM209
TM9SF4
BNIP3L
STAG3
SPRYD4
RBBP5
NDUFA12
GPC2
FAM98C
RBM23
GGCT
ZNF585A
ZKSCAN4
TPP1
RASL11B
RAB11B
MRPL45
C15orf40
CLASRP
C7orf31
PIGU
TMEM106C
RPS19
POLDIP3
EEF1AKNMT
ARL13B
PEX19
PARS2
MRPL27
EME1
ZNF229
TOMM40L
EIF3G
DUS3L
CCDC125
ZDHHC13
SUMF2
POC5
GSTO2
DTD2
THOC5
ALAS1
RNF20
GALK2
SPG21
SNX19
SNAPC5
GLYCTK
TK1
RMDN3
HIBCH
EID2B
AFMID
MRPS24
KIF3B
WDR70
TSPAN31
HLA-B
CARD8
ZSCAN25
SPC25
SF3A3
SAAL1
NPRL2
MCM10
CYB561D2
CBWD5
CBWD3
UNKL
TPD52L2
CATSPERG
TMEM101
RABEPK
S100A13
PAM16
EPB41
DIABLO
CLPB
CHTOP
ATP5PD
FEZ2
CPLANE2
BET1
ZNF212
ZFYVE27
ZFYVE19
NOMO3
DNAJC17
TMEM94
PRMT2
MRI1
RIN1
SEC24B
SLC35B1
PDE4C
LHPP
ZNF629
RRP36
DEF6
EXOC7
AZIN2
ABT1
TBC1D23
SMARCAL1
LIMK1
KRR1
FIS1
DYRK4
CABYR
ZSCAN23
SRPRA
FNDC11
FBXO34
C2orf42
ZC3H6
BCAS4
ZNF235
TARS2
SLC37A4
POLR3H
LRWD1
IFT22
CZIB
ALKBH4
SLC39A3
PRKCSH
POLR2E
PCNA
MRS2
IL17RC
GPSM3
CLCF1
CDS2
CCDC151
BIN3
SYS1
NUDC
EFNA4
DCTN3
OCEL1
ILVBL
DMAP1
SEL1L
BECN1
RAB29
FRAT1
TYK2
CEP41
CARS1
SMG8
PEX11G
DDX56
CHURC1-FNTB
CHURC1
CCT2
ZFP1
TIMM10
TCTN3
TANGO6
NDUFS2
NDUFA8
MRPS14
MORN5
KAT5
MMACHC
BRIP1
RPP40
GTF2IRD2
LUC7L
HSPA12A
GOLGA7
ENO4
TTLL9
NRAS
EPG5
CYB5R3
AP2M1
UBE2T
CMAS
ZNF17
SNUPN
SLC35F6
COX19
ASCL5
AP1G2
ZNF334
CEP20
CCDC38
AMDHD1
ZNF211
RABGGTA
PPT1
MYH7B
GSS
GPAM
AP5S1
WDR31
SKIV2L
NELFE
ERCC4
MED6
PSMC3
MIS18BP1
HAUS1
ATP5F1A
MED30
DHX35
ZNF317
ZNF138
FDPS
DBT
CCDC12
PEX16
FAM160A2
DCAF8
ATG7
ZFP37
PDHB
NELFCD
LMTK2
GINS3
BUB3
ZNF525
SEC22A
IPO9
ZSCAN31
ZNF701
UNK
UBE4A
SIPA1
POLR2C
NUBP1
MPHOSPH6
HDAC4
DCP1A
UTP6
SAP30BP
RECQL5
WARS2
SYTL2
STK36
SHKBP1
RNF25
PIGC
PDCL3
NPHP1
MOSPD3
IKZF4
ZNF222
WDR54
VPS8
C2orf81
ZNF155
TMX1
TAF6L
NOLC1
MRPS36
MED1
HAUS5
CHD6
ZNF546
ZNF268
SYCE3
RTF2
PPP1R13L
ANAPC15
SPC24
SHQ1
PRPF3
MKNK1
DAGLB
CALR3
C19orf44
RBM42
HEATR1
EXOG
CBWD6
NDUFS7
ZDHHC12
PYROXD1
PID1
PAF1
MED29
EIF3C
CENPH
AARSD1
ZNF563
ZNF134
TRIQK
TCOF1
SEC61A2
MRPS22
CASP8
WDPCP
MTMR14
MKS1
MDH1
ZNF221
TIMM13
RPLP0
RARS1
LTN1
LMAN2
FNTB
DNMT3B
DMAC1
CUTC
COX15
CEP152
USE1
TRIM16
TPCN2
NMNAT3
METTL2B
C7orf26
ACYP1
PMPCB
FYCO1
VPS41
SVBP
SCAMP3
RPAP1
ERMAP
ACTR5
TPX2
EXOSC2
ADCK5
PFKFB4
NRXN2
IP6K2
EPHB3
ATP5MC1
AHCY
TMEM177
TMBIM4
TCEA2
SPAG1
FAM172A
DDX52
CHAC1
MALSU1
DLD
ATP5PO
TRIM21
TATDN3
NSL1
NCEH1
ZNF791
ZNF776
ZNF490
RNF114
POLR2F
PLEKHN1
OPA3
NOP53
ECHS1
C22orf23
ARHGEF5
YTHDF2
WASHC1
IL18R1
CCDC61
TOMM7
POLR1E
NOMO1
DOLPP1
DNAL1
CWC22
ZNF789
RPP25L
PSEN2
NEURL2
MAPKAP1
HEATR5A
GRK6
CTSA
C7orf50
ASXL1
AP1S1
MAN2B2
HMGCL
ZNF709
ZNF311
SMUG1
SETX
SEC11C
SDHC
PTCD1
POLR2J2
OAZ2
IMPA1
GFM1
CPSF4
CMC1
BLVRB
TSPAN4
RCBTB2
RAB8A
PRRC2B
PPOX
MINDY3
IQGAP3
DHX8
ZDHHC24
UTP3
SNIP1
SLC25A20
PIKFYVE
PAFAH2
MRPL52
KIF3A
DDX19B
ACTN3
WBP1L
MEN1
LARS2
FANCC
ATP6V1F
PLD3
MEA1
GPN3
FDX2
FAM216A
C19orf47
ALG14
ZNF551
TMEM54
SLX1B
SLX1A
PPP2R5D
POLR1F
IFI35
HIBADH
DDX47
BOLA2-SMG1P6
BOLA2B
BOLA2
TUT1
TTLL4
TTI2
NOL10
GET1
DNTTIP2
CRELD1
TSNAXIP1
SUCLA2
SNRNP35
RANBP10
GTF3C3
ATP5MPL
SLC35B4
NOB1
MAPRE1
CCZ1
ANKRD31
USP42
RBM28
GLMP
DEPTOR
UBE2V2
SH3BP5L
NOTCH2NLC
LRRC8E
CDK5RAP2
CAMLG
UBE2C
PLA2G4A
PGAP2
IQCB1
IKBKE
HILPDA
FAM136A
EAF2
DSN1
DNAJC28
CHMP4B
YIPF4
LTBP1
HEATR6
CSDE1
CCDC34
PXYLP1
MRPS23
GDPD1
ZFYVE21
ZCCHC10
XRCC3
WDR24
TAF1C
NEK10
ERV3-1-ZNF117
ERV3-1
CHST12
ALKBH7
NHEJ1
HAX1
EDC3
CRTC1
COMMD1
ATP9A
ZNF808
ZNF470
VCPKMT
STXBP2
SMIM13
PEX26
MOK
KCTD18
HLA-E
FBXO38
ANGEL2
ZNF549
UCHL3
RSAD1
HS1BP3
DBR1
COMMD6
C11orf65
BSN
AP1M1
ZKSCAN1
TTC27
RINT1
MCM5
GMNN
ESPL1
EDEM2
CYB5R1
BRPF3
ACIN1
ZSCAN2
TGDS
SNRNP48
NEK2
CCDC174
ASB8
WWP2
PLRG1
CCPG1
C15orf65
BTN3A1
ARSB
ARFGAP2
ZNF713
ZNF528
ZNF205
TTF1
TRIM56
THUMPD1
RPL26L1
PTRHD1
PCCB
GINS4
EXO1
CRLF3
CENPO
CCDC136
ATP13A1
ZNF426
TMEM67
RAE1
PMS2
METTL27
LGALS3BP
LDAH
DPM2
BTN2A1
ARMC9
AIMP2
TM2D1
PHKG2
PARP11
NUP205
HIF1AN
GTF2H4
ABLIM3
ZNF774
ZNF473
ZBTB9
YAE1
VRK3
STK4
PTER
PPP5C
HIP1
FAM117B
CXXC1
ZNF720
ZNF415
TUBGCP3
TRIM34
PSTK
PSMD8
NOC3L
MRPS33
DRG2
DNAJB5
WWOX
TMEM222
SIDT2
NUDT16L1
GOSR2
EIF3F
COPS4
CDK5RAP3
BBS12
SH3D21
SDHB
ROMO1
METTL18
ESYT2
DNAJB12
CALU
C1orf112
AURKAIP1
SGF29
REXO2
JMJD7-PLA2G4B
JMJD7
CHCHD3
TRAPPC5
TFEB
SLC44A2
PAIP2
NUP107
NUCB1
NOMO2
DENND2B
AKIP1
USP19
ELMO3
CCDC102A
ATP6V1B2
ANKRD35
ANKRD13C
ABLIM2
ZSCAN16
ZNF24
VPS4B
RTRAF
ITGB2
GTPBP3
ERICH6
CDK5RAP1
BORCS7
ZNF92
ZNF649
ZNF461
ZNF23
SWSAP1
POLR2D
MTRR
FASTKD3
CCDC150
ZNF442
SNRPE
SF3B4
SETMAR
MACROD2
DERA
CSE1L
CLP1
ZMPSTE24
XRCC1
TRPM4
SCPEP1
PAXBP1
HNRNPA1L2
FAM220A
CEP83
ADK
TOM1
NEIL3
MTMR3
MRPL16
MOCS2
GPER1
GATAD1
CCDC71
VPS39
TMEM39A
RETSAT
PPP1R35
LOC730098
HDAC1
FICD
ELMOD3
CHUK
ZNF493
ZNF468
ZNF397
TRMT10B
NANS
MTRF1
GCDH
DDX50
CERS5
ARMH3
ZNF687
ZNF451
ZNF16
STARD3NL
RNF34
RIT1
KATNB1
CYP2R1
RBP5
MPI
MCCC1
INTS4
CLSTN3
TMEM14A
ORC5
MIGA2
MAP1LC3A
LSM10
FRMD8
COX14
ANAPC4
TUSC2
SULT6B1
RAD54B
MSTO1
DUSP3
COA7
ZNF71
TOR1A
TCTN1
SPATA4
RBBP9
NCOA1
COMMD9
ATAD5
SCAPER
POT1
NR2C1
MARS1
ISOC2
GANAB
FKBP8
FAM156A
CCDC15
ARHGAP9