ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116459 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◣ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
MTRNR2L1
RGPD2
RGPD1
EMILIN2
MTRNR2L10
METTL15
KIF18A
METTL25
CCDC59
IDH3B
SUMF1
ATG14
MTRNR2L2
MSH3
DHFR
NAGPA
RBM19
MTRNR2L8
NGDN
VPS50
HEPACAM2
SPNS1
MAMDC2
HAGH
FAHD1
C1orf198
TRMT1
NACC1
TMEM242
U2SURP
ZNF830
CCT6B
MRM3
GLOD4
FAM204A
UBE3B
KCTD10
PPWD1
CENPK
MRPS18C
HELQ
ISY1-RAB43
ISY1
MRPL39
GATB
RBM48
PEX1
COMMD9
CDC23
GPATCH3
SMG8
ZNF165
ZC3HC1
ERAL1
MRPL1
EIF2D
COPS7B
TSR3
GNPTG
ZFYVE26
RAD51B
LMAN2
PHF5A
ACO2
GTF3C5
C8orf33
MED6
RTTN
NOC2L
KLHL17
MTRNR2L6
NGB
KRR1
SSNA1
ANAPC2
NDUFAF2
ERCC8
PPT1
GET3
SFSWAP
TOMM22
RANBP6
TMEM41A
WASHC2A
POLR3F
DZANK1
TCTN2
TIMM22
BSDC1
PEPD
POLR1F
XAB2
PCP2
PSMB7
WDR18
TFPT
PRPF31
SUPT7L
SLC4A1AP
TOMM6
MRPL44
TRAPPC2L
GALNS
SCML1
TMEM39A
NDUFS3
KBTBD4
SREK1IP1
CWC27
INTU
ZNRD2
FAM89B
FBXL12
TMEM199
POLDIP2
C16orf91
TRIP4
NDUFS7
PUS10
PEX13
MRPS15
FEM1A
LIN52
ALDH6A1
NCAPH2
LMF2
MRPL45
MTIF2
NUP214
CSPP1
COPS5
BRIX1
ALG1
WASHC2C
DNTTIP2
VIRMA
UQCC1
RNF26
MRPS14
URM1
RPTOR
EIF3H
MAIP1
CWF19L1
TAF3
TEKT2
ADPRS
PDCD6IP
NOL8
CENPP
PELP1
SAP30BP
RECQL5
MRPL55
RRP15
COX10
TMEM126B
DLG2
TIMM17A
YIPF2
TIMM29
DBT
LRRC29
BBS1
IPO11
PFDN1
RBM42
TMEM101
LARS2
MDH1B
FASTKD2
MTERF4
VPS11
EIF1AD
BANF1
NPM3
FGF8
FAM162A
CCDC58
C17orf75
UBIAD1
TXN2
CRBN
MUC3A
ZMAT2
METAP1D
TRIAP1
TSR1
SGSM2
PMPCA
ENTR1
MTBP
MRPL13
SETD3
CCNK
ATP5IF1
DNAJC30
BUD23
HBS1L
TRIM48
MRPS22
NSFL1C
MFN2
TPRN
TMEM203
NDOR1
APBB2
LONP1
CATSPERD
RPUSD4
FAM118B
METTL16
SLC39A4
CPSF1
BRF2
EIF3F
COMMD4
RTN4IP1
QRSL1
WDR74
DNAJC11
TOP3A
SMCR8
BABAM1
PSMC3
GPATCH4
VCPKMT
MRPL58
PIGL
NCOR1
NUP54
MRTO4
EMC1
CEP20
MRPL21
IGHMBP2
HEXA
MKS1
RCE1
DDX23
SPATA25
NEURL2
CTSA
SF3B2
GAL3ST3
MYL5
ATP5ME
KAT8
QRICH1
C5orf51
PEX19
C12orf43
SLC25A26
CSTF2
MRPL2
KLC4
RDH5
ITGA7
BLOC1S1
NMT1
DCAKD
NOL11
NMNAT1
LZIC
ATP5MF-PTCD1
ATP5MF
SF3B3
COG4
NUP160
COX16
TACO1
HNRNPA1L2
TAS1R1
NOL9
VPS33A
OAZ3
ZBTB45
UHMK1
TRMO
UTP20
TRMT61B
DPP9
SENP1
PFKM
ZFAND2A
MNAT1
PISD
MOCS3
DPM1
ZNF213
USP30
SUPV3L1
OXNAD1
DPH3
MRPL48
MRPS11
MRPL46
RBX1
SPRYD4
ALKBH3
ZNF17
ZSCAN22
KCTD5
RPS28
NDUFA7
MRPS31
COL23A1
ATP7B
ALG11
SPATA20
VAC14
HMGCL
THUMPD1
TNPO3
RNF6
OS9
RABL3
GTF2E1
USP54
ARFGAP2
MZT2A
SLC25A53
DIABLO
SUGCT
MPLKIP
ERGIC2
PPP1R7
PASK
TMEM216
ABT1
SLC35A3
TM9SF4
ERICH4
DMAC2
TPP1
TEFM
TIMM21
FBXO15
TJAP1
TAF2
DNAJB12
HSPBP1
BRSK1
CDK5RAP1
XPO4
LYRM4
FARS2
KDM4D
CWC15
RANBP3
USP8
TATDN3
NSL1
POLR1H
TARS2
SMPD4
MZT2B
LIN7C
NCAPD2
MRPL51
OSCAR
NDUFA3
MED23
COPS8
OPA1
GRWD1
FBXO28
SEC16A
C9orf163
ANKRD13C
AURKAIP1
MTO1
PIGK
UBN1
GLYR1
STX18
ZDHHC6
VTI1A
MRPS10
DOHH
WDR53
FBXO45
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
VPS25
WDR48
SCN11A
PPP1R15B
METTL2B
PCID2
CUL4A
TAF11
ANKS1A
SLC35B1
WDR24
TRMT44
ACOX3
ZZZ3
ZNF770
ATXN2L
MPHOSPH10
MCEE
NDUFB5
MRPL47
SLC7A6OS
PRMT7
STX16
DHX35
AP5Z1
DUS2
DDX28
EIF3E
SYF2
ZNF2
MFSD5
PHB2
TMX2
MED19
CCAR2
C8orf58
TMEM217
TBC1D22B
APTX
SART3
ISCU
NOC4L
DDX51
EMC4
TSN
IQCH
AAGAB
HAX1
NUP155
CCDC43
TAX1BP3
EMC6
KLF1
GCDH
CDKAL1
RFXANK
BORCS8-MEF2B
BORCS8
NDUFA10
EEF1E1
TBRG4
WDR36
XPC
LSM3
LAMP1
ZC3H18
GOLGA3
ARFGEF2
YIPF3
POLR1C
DHX40
RPUSD2
CCDC32
KLHDC4
ZMPSTE24
CACTIN
UMPS
POLR2K
FBXO43
FDX2
LRRC8A
KYAT1
LSM5
AVL9
GTF3C3
SNRPC
RPS7
DUS4L-BCAP29
DUS4L
COG5
ACIN1
FAM187A
EFTUD2
CCDC103
ARMC8
RNASEK
C17orf49
TSR2
WDR83OS
WDR83
MAN2B1
DDX46
MAGOH
ZCCHC4
EXOSC3
ZKSCAN4
UQCRC1
TIMM44
UBXN11
TBC1D22A
SRPRA
FANCD2
TRDMT1
NDUFA9
AKAP3
NDUFV1
TMEM126A
STOML2
SKIDA1
GOSR1
TBC1D23
PUM3
NSUN4
WDR11
NUF2
ZDHHC16
EXOSC1
MTMR4
NDUFAB1
TUFM
SH2B1
MIA3
TRUB1
PTPN21
HIRIP3
UBN2
MCOLN1
PTCD2
MRPS27
TM2D1
NOP16
HIGD2A
MED4
CCDC97
YBEY
MCM3AP
PHAX
ZNF561
SF3A3
TOP3B
ALKBH8
ZNF383
MYSM1
MRPL11
FAM149B1
ECD
WASHC5
NSMCE2
TEPSIN
NDUFAF8
EXOSC9
DLST
ANAPC11
ALYREF
SSBP1
GTPBP10
MAGOHB
NCSTN
COPA
COMMD2
VAMP3
GPX8
ANKFY1
UBL5
SYNGAP1
CUTA
MRPS7
GGA3
METTL1
EEF1AKMT3
CYP27B1
PTCD3
POLR1A
TERF2IP
KARS1
CXorf56
DNAJA3
SDHC
MPZ
NME3
MRPS34
EME2
FAM32A
SDE2
IPPK
STMN3
RTEL1
SH3YL1
ACP1
TBC1D19
AP3S1
MRPL35
IMMT
SPTLC1
NOB1
ZBTB8OS
RBBP4
MRPL4
MRPS18A
ABRAXAS2
L3MBTL2
ZNF497
CWC25
MRPL20
MED9
CMTR1
ZSCAN30
TYW1B
TMEM11
FOLR3
ELP5
CTDNEP1
NXT2
PIGS
PEX3
ADAT2
TTC31
CCDC142
TBC1D17
AKT1S1
B4GALT7
GTF2H3
EIF2B1
SNRPD3
GUCD1
SMU1
ASH2L
TMEM230
GPN1
CCDC121
VPS52
RPS18
PSMB2
FRA10AC1
ZNF461
MDP1
CHMP4A
NUP107
ZNF408
ARHGAP1
OTUB1
NUFIP1
GPALPP1
PEX14
DFFA
SLIRP
ALKBH1
MRPS23
SDHAF2
CPSF7
ZWINT
RUVBL2
GYS1
SMG7
RNF166
CTU2
MTOR
NFKBIL1
DDX39B
ATP6V1G2
TBL3
EIF4G2
REXO4
ADAMTS13
TMEM128
OSBPL9
PRPF38A
ORC1
ATAD3B
MSX1
GTF2H4
AP1G1
THBS3
MTX1
NBAS
MAP3K7
MRPL53
ZNF614
DDT
ITGB3BP
EFCAB7
DDTL
PNPT1
ZNF205
RMDN3
SPDL1
ITGB1BP1
CPSF3
SELENOH
WDR4
GFM2
C12orf73
RUVBL1
EEFSEC
MAPKAPK5
ANAPC5
ZNF721
PIGG
FAM104B
MTRNR2L3
MAGEB10
SUPT4H1
ATP6V1C1
FKBPL
ATF6B
STK36
RNF25
NR1H3
ACP2
IMMP1L
ELP4
ZNHIT2
MRPL49
FAU
VPS41
GBA
YY1
MRPS35
CEP162
PPP1R10
MRPS18B
GPM6A
SSU72
MRPS17
GRPEL2
MED18
SEC13
TBC1D15
MED21
NHP2
DGUOK
ZBTB11
SEC11A
SRRD
HPS4
SF3B5
MRPL52
DCP1A
ZCCHC10
BHLHB9
ZNF195
NDUFC2-KCTD14
NDUFC2
ANAPC1
MTRF1
THAP10
LRRC49
NDUFA5
THBS4
MTX3
AQR
UQCRB
CHM
RAB3GAP1
SPC25
PWP1
DDX19A
HIF1AN
ZKSCAN8
KANSL2
GCN1
MFSD1
KLHL7
ATXN7L1
UBE2L6
LCMT1
GADD45GIP1
JRK
NOL10
MRPL3
PGGT1B
ATRIP
MRPL27
EME1
NDUFAF5
ESF1
CSTF2T
ZNF426
NME1
ZNF622
RPP30
GPATCH1
PAF1
MED29
TTC26
RPAIN
NUP88
OTUD6B
SCAF11
PSME3
BNIP1
NOLC1
ZNF79
GTF2H2
MALSU1
EIF4B
POLR2J2
ALG10
GID4
ATPAF2
THOC1
FAF2
COQ3
MED25
FUZ
DDX49
COPE
AASDH
ZSCAN9
MED27
GRN
WDR20
HSP90AA1
ATP6V1G1
PCNP
MRPL37
CYB5RL
AHCY
MYNN
ACTRT3
COQ5
TBCK
AIMP1
SNX1
CIAO2A
NELFA
ZNF507
SF3B6
FAM228B
NUDT5
CDC123
PRR3
GNL1
POLR3B
PURB
PSMC4
DHDDS
WBP1
INO80B
PHF23
DVL2
C16orf89
RBBP5
SLC33A1
ANTKMT
PFAS
CTC1
RBM23
BMS1
TFIP11
SDR39U1
MED1
DUX4
PSMB6
NOXA1
MAZ
TMEM183A
TMEM237
CLPTM1L
FAM98B
RBM28
NUP188
DOLK
TBC1D30
GNS
POMZP3
TBCC
BICRAL
DNAJC25-GNG10
DNAJC25
RAD54L2
SERP1
EIF2A
FCF1
AREL1
NDUFB3
FAM126B
PPIL1
C6orf89
TSFM
NOL12
ZNF292
INTS3
ZNF501
NCBP2AS2
NCBP2
YJU2
ZNF581
ZNF580
CCDC106
COPS4
CDCA8
C1orf109
SRSF11
LRRC40
DNAJC13
SDHB
SPC24
EXOSC2
RNASEH1
STARD3
WDR97
MAF1
INTS12
GSTCD
RPL37
COPZ1
SENP5
UBA5
ACAD11
NDUFS4
PPAN-P2RY11
PPAN
ANGPTL6
BRMS1
B4GAT1
HTRA2
DQX1
YARS2
RPAP1
MED28
ATG16L1
ZSWIM1
DOLPP1
MUL1
ZNF594
TIMM50
VTA1
NMBR
PINX1
ZNF839
RPL23A
RAB34
ILF3
METTL2A
ARMC1
MRPL16
HSD17B10
BRCA1
RNF181
AARSD1
PPIG
NARS1
LEMD3
DCAF10
SPAAR
ZBED5
BORCS7
METTL14
ZSWIM8
CHCHD1
NAT10
PPIL3
NIF3L1
CRYAA
CRYAA2
POLR2J3
C1D
PLAA
IFT74
OSGEPL1
RPL9
LIAS
UBE2L3
SEC24C
MRPL22
GEMIN5
NDUFB6
ZFPL1
TMEM262
CDCA5
EXOSC10
ZCRB1
PPHLN1
FAM227B
DTWD1
MRPL30
MITD1
CCDC57
RBM15
MARCHF8
GATAD1
PRKRA
PJVK
SF3B4
TFB2M
CNST
ALG10B
SAP18
NKAP
UTP15
ANKRA2
TUT1
TRAPPC4
RPS25
INTS9
HMBOX1
TOR1AIP2
TOR1AIP1
DDX47
COX7A2L
IKZF2
CHIC1
IPO4