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About This Database

8987Array-Chromosome

Data description
Data name
8987Array-Chromosome
DOI
10.18908/lsdba.nbdc00194-008
Description of data contents
Position information of the clone of Rice8987 Array (f_array) on chromosomes
Data file
File name :
rmos_8987array_chromosome.csv.zip
File URL :
File size :
96.5 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/rmos_8987array_chromosome#en
Data acquisition method

-

Data analysis method

-

Number of data entries

9,105 entries

Data detail
Data item Description
f_array_element

f_array element number (spotted position on the glass: refer to the 'Array patterns and clones')

Accession1

DDBJ accession number 1

Accession2

DDBJ accession number 2

Clone name

Clone name

DDBJ name

Name in the definition of DDBJ

Multi

Similarity between sequences of cDNA clones and those of rice genome. (high to low ; A, B, C….)

Mapping

D : Sequence of the clone was directly used for mapping. G : Sequence of the representative clone in the group consisting of clones with similar sequences was used for mapping.

Chr.

Chromosome number

Clone name (group)

Representative clone name in the group

Multi (group)

Similarity between sequences of the representative clone and rice genome in the group. (high to low ; A, B, C….)

Chr. (group)

Chromosome number of the genome sequence similar to that of the representative clone in the group