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About This Database

Genomic Dynamism

Data description
Data name
Genomic Dynamism
DOI
10.18908/lsdba.nbdc00193-007
Description of data contents
List of sequences commonly found in mitochondria, plastid and nucleus of rice. The list represents mitochondrial and nuclear sequences with homology and mutations to the plastid sequences. From these results, the movement of plastid sequence fragments into the mitochondria and nucleus can be clarified.
Data file
File name :
rmg_genomic_dynamism.zip
File URL :
File size :
1 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/rmg_genomic_dynamism#en
Data acquisition method

-

Data analysis method

-

Number of data entries

6 entries

Data detail
Data item Description
plastid sequence No.

Plastid sequence number

Genes

Genes on the plastid sequence

Length

Length of the plastid sequence

Mutations of comparison with nuclear sequence

Comparison with the most closely related nuclear sequence
sub: substitutionsdel: deletionsins: insertions
The total number of nucleotide alterations in the fragment is shown in parentheses

Homology

Percentage homology to the most closely related nuclear sequence

Mutations of comparison with mt sequence

Comparison with the most closely related mitochondrial sequence
sub: substitutionsdel: deletionsins: insertions
The total number of nucleotide alterations in the fragment is shown in parentheses

Homology

Percentage homology to the most closely related mitochondrial sequence