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Life Science Database Archive
RMG

Nuclear-like Seq in mt Genome

Data detail

info Data name Nuclear-like Seq in mt Genome
info DOI 
info Description of data contents 

List of sequence fragments in rice mitochondrial genome that showed similarity to nuclear retrotransposon and transposon sequences.

info Data file 
File name:
rmg_nuclear_like_seq.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/rmg/LATEST/rmg_nuclear_like_seq.zip
File size:
1 KB
info Simple search URL 
info Data acquisition method 

"Entire Sequence" data in this database

info Data analysis method 

Homology searches using BLASTX

info Number of data entries 

19 entries

Data itemDescription
nuc. position Position of the sequence fragment in the rice mitochondrial genome
length Length of the sequence fragment
sense or antisense Sense or antisense strand

+: sense
-: antisense
organism Source of the most closely related transposon/retrotransposon sequence
kind of element Transposon or retrotransposon

R: retrotransposon
T: transposon
accession GenBank Accession number of the most closely related transposon/retrotransposon sequence
% Percentage homology to the most closely related transposon/retrotransposon sequence
definition Characteristics of the most closely related transposon/retrotransposon sequence