Data detail | |||||||
 Data name | Cluster (Viridiplantae) | ||||||
| DOI | 10.18908/lsdba.nbdc01194-02-002.V002 | ||||||
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| Description of data contents | Clusters of amino acid sequences of Viridiplantae (green plants) obtained from the NCBI Reference Sequence Database. Along a phylogenetic tree, clusters were generated in Viridiplantae taxon and in each sub-taxon of Viridiplantae by using the results of all-against-all BLAST searches among the amino acid sequences. An amino acid sequence belongs to only one cluster in a taxon. | ||||||
| Data file | |||||||
| Simple search URL | http://togodb.biosciencedbc.jp/togodb/view/pgdbj_ortholog_db_viridiplantae_cluster#en | ||||||
| Data acquisition method | Data in "Protein (Viridiplantae)" was used. | ||||||
| Data analysis method | Along a phylogenetic tree obtained from the NCBI Taxonomy Database, clusters in lower taxa (subclusters) were recursively aggregated to form clusters in a taxon (superclusters). | ||||||
| Number of data entries | 2,310,444 entries | ||||||
