About This Database

Pathological Image Information

Data description

Data name

DOI

Description of data contents

Information regarding each high-resolution digital image in the "Pathological Images (SVS format)" section.

Data file

File name :

open_tggates_pathological_image.zip

File URL :

File size :

370 KB

Simple search URL

Data acquisition method

Information entered into the digital slide scanner while scanning the slides.

Data analysis method

Number of data entries

52,879 entries

Data detail

Data item	Description
EXP_ID	ID assigned to each test which is defined mainly as a combination of COMPOUND_NAME, SPECIES, EXP_TEST_TYPE, and SINGLE_REPEAT_TYPE. IDs for in vivo tests are #0040 or larger.
GROUP_ID	ID assigned to each group which is defined mainly as a combination of DOSE_LEVEL and SACRIFICE_PERIOD. IDs are in double digits. (e.g. 01, 16)
INDIVIDUAL_ID	ID assigned to each individual within a group. IDs are in single digit.
COMPOUND_NAME	Compound name
ORGAN	Organs evaluated in tests. Liver or Kidney.
FILE_LOCATION	FTP server path to the pathological images.
CAPTURE_NO/NO_OF_SAMPLE(n/n)	The sequence number of scanned images with the total number. 1/2 means that 2 glass slides were scanned for an organ and that the image is the first one.
SPECIES	Species
SINGLE_REPEAT_TYPE	Type of in vivo test. Single-dose test or 28-day repeat-dose test.
ADMINISTRATION_ROUTE_TYPE	Administration route
ANIMAL_AGE(week)	Age of animal (weeks).
SACRIFICE_PERIOD	Sampling time or period on in vivo test.
DOSE	Dose
DOSE_UNIT	Unit of dose