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Life Science Database Archive
GETDB

Clustering Table of the genome insert site of Drosophila GAL4 enhancer trap lines (Cluster List)

Data detail

info Data name Clustering Table of the genome insert site of Drosophila GAL4 enhancer trap lines (Cluster List)
info DOI 
info Description of data contents 

Cluster data in which the insert positions of the Drosophila GAL4 enhancer trap element are clustered by the closeness of their positions from each other. 2,099 clusters.

info Data file 
File name:
getdb_cluster.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/getdb/LATEST/getdb_cluster.zip
File size:
56KB
info Simple search URL 
info Data acquisition method -
info Data analysis method 

Mapping by Blast (using the genome sequence (Release 3.1) sequenced by Berkeley Drosophila Genome Project (BDGP)/Celera as the target genome)

info Number of data entries 

2,099 entries

Data itemPrimary keyForeign keyDescription
ClusterId checked   Cluster ID of genome insert coordinate
Cluster Member(Clone Name : Cluster Id)     Clone name corresponding to each of the insert point sequences belonging to the cluster
Cluster Size     Number of insert coordinates belonging to the cluster.
Link to Clone Table     Cluster ID. (Link to CloneTable in TogoDB.)
Link to Strain Table     Cluster ID. (Link to Strain Table in TogoDB)
Chr. Band     Chromosome band
Insertion Point (Min)     Minimum value in the cluster of insert positions on genome sequence
Insertion Point (Max)     Maximum value in the cluster of insert positions on genome sequence
Max-Min     Maximum value minus minimum value of insert positions on genome sequence