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About This Database

Plant phenotype

Data description
Data name
Plant phenotype
DOI
10.18908/lsdba.nbdc01509-003
Description of data contents
Phenotypes mentioned in the presented database, such as "long leaf", can be expressed as combinations of "entity" and "quality". Terms of entities and qualities are expressed with ontology terms, to standardize phenotype information. Entities: Names of organs, tissues, development stages. The vocabulary is defined in Plant Ontology(PO). Qualities: Characteristics, attributes of entities. The vocabulary is defined in Phenotype Ontology(PATO).
Data file
File name :
riken_piam_phenome.zip
File URL :
File size :
2.3 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/riken_piam_phenome#en
Data acquisition method

Plant Ontology, Phenotype Ontology

Data analysis method

-

Number of data entries

114 entries

Data detail
Data item Description
Entry URI

Entry URI

Entry name

Entry name

Entity in PO

Entity (defined in PO)

Quality in PATO

Quality (defined in PATO)

Num of observation data

The number of entries where the phenotype is used in "Observation of Arabidopsis phenotype"