ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX768290 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX768290: HT-29

◢ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

POR
IQCH
AAGAB
PARK7
POLG
SNAP29
PI4KA
PPIB
TAF15
SLC35E2B
CNOT6
MRPS24
AKIRIN1
ARRDC4
PFDN4
TMEM160
ZBTB32
DOLPP1
UBE2C
PRR19
PAFAH1B3
PROSER3
LIN37
HSPB6
RNASEH2A
PRDX2
PTOV1
PROX2
OGA
SLC35E2A
MYO9B
HAUS8
WASL
PHRF1
HHIPL1
CCDC85C
PLP2
MAGIX
UBA1
PITPNM1
CDON
GNB2
ZNF775
ATP6V0C
AMDHD2
CIC
SMIM41
ATG101
STIP1
WDR38
RPL35
ARPC5L
ZNF8
PRKDC
MCM4
PDXDC1
ETV2
COX6B1
RASSF7
LMNTD2
KHSRP
EED
DBP
CA11
ZNF335
TAF6
SELENOW
MBLAC1
CNPY4
DNMT1
CLDN9
UCHL3
COMMD6
HNRNPL
PRKCI
BZW2
ANKMY2
RAB4B
MIA
TMEM45A
WDR97
MAF1
CYC1
RNF13
RHBDD3
EWSR1
CDCA7L
PAXIP1
CNOT3
RMND5B
PRR3
GNL1
TANGO2
ARVCF
TRAPPC6B
PNN
ULK4
USP15
TEPSIN
NDUFAF8
UIMC1
GIT2
ANKRD13A
PIK3R3
NDST2
ZMYM2
MRPL20
CCNL2
TBC1D17
PNKP
AKT1S1
LIN54
TOP2A
SHKBP1
KAT7
PTP4A2
DPP9
TARDBP
ANP32A
EIF3B
ARAF
PPP5D1
CALM3
TNNI3
DNAAF3
PGP
E4F1
MLST8
BRICD5
CENPE
CNOT1
ARNTL
FRAT2
PPP1R13L
POLR1G
PSPN
ALKBH7
MRPS11
MRPL46
DISP3
SPATC1L
TTC9B
CCNP
SP2
TIGD5
EEF1D
TSKS
AP2A1
CMC2
CENPN
ANKRD12
UROS
BCCIP
HDAC1
UBE2A
CXorf56
LEMD2
FANCI
PTDSS1
MTERF3
C6orf226
PPDPF
FUS
SERTAD1
SYVN1
NCDN
KIAA0319L
PRDM10
FRAT1
FAM53C
CDC25C
MYL12A
CASKIN1
PIP4K2B
FOS
NUCB2
SKA2
PRR11
HMGCS1
PRKAG2
ANKRD39
FAM83D
KCTD2
ATP5PD
UFSP2
C4orf47
MYT1
RBM42
GPR84
TCP11L2
RPL19
CACNB1
IQCE
BRAT1
ATG16L2
TRAF2
RNF103-CHMP3
RMND5A
PSIP1
OSBPL2
SOD2
YY1AP1
DAP3
ATP8A1
ISOC2
MADD
SSNA1
ANAPC2
UFD1
CDC45
OLFML2A
NR6A1
HNRNPUL1
LUC7L2
FMC1-LUC7L2
FMC1
HDGFL2
INAVA
UQCRC2
KATNB1
CSPP1
COPS5
GIPC1
CDK16
LRPPRC
SLC25A42
LRCH4
FBXO24
BCL6
TRIP4
PCLAF
NLK
BAZ2A
ATP5F1B
MOCS3
DPM1
GOLGA6L4
DGAT2
KMT5C
ZMYM5
CSNK2A1
UBE2B
CDKL3
GOLGA6L10
PMVK
STX16
PANK2
TSPAN4
POLR2L
CD151
EFNB2
PDK2
FOSL1
CCDC85B
CKAP5
FZR1
DOHH
UQCRQ
LEAP2
GDF9
ALDH4A1
PKDCC
C2orf42
SRI
GTF2IRD2
HNRNPA1
CBX5
KIF1B
MTCH1
RPN2
MROH8
TUBB4B
FAM166A
STPG3
SLC34A3
PRCP
DDIAS
MSANTD4
TMTC4
VBP1
HOMEZ
DIAPH1
DOT1L
PIF1
OPA3
RRBP1
TTBK2
HDAC2
AK2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RNASEK
KLF6
C17orf49
RAB7A
WASHC5
NSMCE2
FANCF
WDR45
RPL22
RNF207
RLN2
GTF2IRD2B
CD164
PRMT1
COQ8A
MYL12B
IFT52
ATP5MC1
CDIPT
PLEKHG5
TMEM218
PMF1-BGLAP
PMF1
PTCD3
POLR1A
CDK5RAP2
RBM27
ZSWIM1
SPATA25
PRR14
FBRS
CFAP221
ZNF574
GNG3
BSCL2
LSR
CHCHD6
FBXO5
LIPE
ANKRD10
TRPM4
HRC
GATAD2B
OSBP
NOL8
CENPP
KCTD7
SELENOH
GOLGA6L3
PRKACA
USP31
HNRNPC
SRGAP2C
FAM72B
CENPA
PKNOX1
ZBED6CL
LRRC61
ACTR3C
SUN3
C7orf57
ZFAND3
SMC3
MTMR12
TTLL7
SLC46A3
SS18
WDR62
THAP8
FAAP24
CEP89
SIRT2
NFKBIB
CCDC59
FAM72C
SRGAP2B
FAM72D
CNFN
SETD5
PRRC2B
CANX
ANKRD17
TPBG
ZNF219
TMEM253
PLXNA3
ZNF564
SPATA17
GPATCH2
C21orf91
FLCN
CWC25
DGCR8
RUVBL2
GYS1
OXR1
C6orf62
ZSWIM4
MYH14
UNG
ALKBH2
MAOA
UBALD1
MGRN1
ABTB2
IVD
SIGMAR1
GALT
ARID3C
NOCT
ZNF687
RLN1
UCKL1
MIA2
OGDH
ACTN1
H2AZ2
LENG1
UQCRH
LRRC41
YIF1A
TMEM151A
CCDC102A
ADGRG5
ATG9A
ANKZF1
NDUFB1
CPSF2
DRAP1
C11orf68
KIF5C
CCT5
ATPSCKMT
SRPK2
RITA1
DDX54
DCUN1D4
ACAP2
RAVER1
ICAM3
SLX4IP
MKKS
SPRYD3
TADA3
ARPC4-TTLL3
ARPC4
MRPL21
IGHMBP2
PXMP4
ZNF484
YJU2
RFX1
UTP18
MBTD1
MAP1LC3B
FBXO31
AFF1
JPT2
PTCD2
MRPS27
TBL3
RPS2
RNF151
NOXO1
PLAG1
CHCHD7
ATG9B
ABCB8
PPFIA3
LIN7B
C19orf73
PRKCZ
SRGAP2
FAM72A
SPSB3
MRPS34
EME2
MRPS31
FAM110A
MTRNR2L2
MSH3
DHFR
TYK2
PSPH
CCT6A
MPHOSPH8
MIA3
EIF3F
FASN
ENPP5
CEP164
DAB2IP
SMARCAL1
SREK1IP1
CWC27
METTL3
DNM2
STRIP1
ZDHHC5
MTMR14
CLP1
ZFAND4
KLK6
TMEM129
TACC3
SLBP
P4HB
ARHGDIA
SAP30L
CNPY3
TINAGL1
PPWD1
CENPK
PAX8
ZNF92
SRXN1
NFYC
POLR2J3
ZNF48
TBC1D10B
MYLPF
SPAG7
PTPRH
ZNF77
ATP5IF1
SIPA1L2
VAMP2
PER1
NECTIN3
PAK4
TSR3
TMEM94
GNPTG
SASH1
ARHGAP19
SZRD1
F11R
TDRD7
BCL9L
MZT1
BORA
VDR
STK35
MAT2A
FCHSD2
FAM20B
GATAD2A
SP1
PAIP2B
RECQL
GOLT1B
SRM
FRMD6
ANKHD1-EIF4EBP3
ANKHD1
MBD1
CXXC1
DYNLL1
EIF4A1
CD68
RRM2
KLC2
RAB1B
BAZ1B
KCNAB2
TOMM40
HSP90B1
SHC1
FLAD1
CKS1B
TOM1
LAMP1
TRAPPC9
RAB28
KLF5
CCDC200
G3BP1
BCAS3
HNRNPAB
TFPT
PRPF31
PRKCSH
CCDC151
RAB40B
DAZAP2
GOT1
ZSWIM3
ACOT8
NAGPA
TPRN
TMEM203
NDOR1
RNF6
PPP6R3
RAB40C
EAPP
LZTS2
PMEPA1
FBXO33
SF3A3
SLC25A38
ZBTB3
POLR2G
MYBL2
RBBP6
FAM227A
CBY1
TOM1L2
DRC3
TMEM262
PABPN1
ING1
CARS2
MAMSTR
PACSIN2
LAPTM4A
HBP1
CDT1
APRT
LANCL2
HIBADH
SMARCD2
MED23
ENPP3
ASH1L
GOLPH3L
TMEM260
TCERG1
KANSL1
PI4K2A
MORN4
KAT6B
ZNF138
BCL2L1
GTF2H2C
GTF2H2C_2
RALY
RCN2
ZNF273
ACAT2
TOP1MT
RHPN1
PRR25
GNG13
FSIP1
ENSA
AKT2
MCM10
TNRC6B
THRA
MED24
GTF2H2
PRR5L
COMMD9
PPP2R5A
CLK3
RNF5
AGPAT1
AGER
UGP2
LY6L
CUL2
USP3
FAM156A
PCYOX1L
MEIS1
PPP3CA
GRIPAP1
SS18L1
PSMA7
PRR12
TMEM242
WRAP53
TP53
BZW1
DYRK1B
NARF
CYBC1
MTRNR2L8
IER5L
VPS26B
NCAPD3
IMMP1L
ELP4
PPM1L
LSG1
EIF2D
SLC45A4
EIF2AK3
ZFYVE21
XRCC3
PHPT1
MAMDC4
AJM1
NOC4L
DDX51
TMEM199
SEBOX
POLDIP2
H4C9
H2BC12
H2AC12
SYNE4
LOC101927572
ALKBH6
RHCE
MACO1
ISG20
TRIP10
GPR108
DOK4
ZFAND2A
SFXN5
TUSC2
TTF1
RBBP8NL
HYAL2
HYAL1
CFAP77
KMT2E
SPTLC2
TK1
SDF4
B3GALT6
TRAPPC3
PER2
MAP7D1
ABHD2
FRYL
RFWD3
CALU
PTMA
BUB1B
IGSF9B
ERV3-1-ZNF117
ERV3-1
JUNB
ERI3
WASF2
MSH2
NFIB
RPS11
RPL13A
LRRC56
HRAS
TIMM50
CHD9
DCAF7
FBH1
ANKRD16
TTC16
TMEM183A
PTRH1
CFAP157
MYEOV
TACC1
RWDD1
CCDC61
H3C15
H3C14
H2AC19
H2AC18
RUVBL1
SEPTIN11
ATF7-NPFF
ATF7
TBCB
POLR2I
OVOL3
CCDC174
LMTK2
GGCT
PDE6D
COPS7B
LYRM1
DCUN1D3
H4C15
H4C14
RGMB
UBN1
GLYR1
SLC25A25
ODC1
NAIF1
FARSA
CALR
RAD23A
KDM4B
CTPS1
PPP2R1A
MAPKAPK5
GDI1
ATP6AP1
RMI1
HNRNPK
HNRNPR
USPL1
HMGB1
TPST1
ACTL6A
TRIB1
TSPAN31
CDK4
AGAP2
RAB11B
KPNB1
MTF2
PGC
NEURL2
CTSA
CCNB2
SPNS1
LAT
FAM126A
CBX8
MAPK9
GET3
CCDC116
SDF2L1
TMEM256
PLSCR3
NLGN2
ATP5F1E
C1orf174
CYTH2
ASPM
H4-16
H2AJ
GLRX5
STAP2
MPND
LY6G6F-LY6G6D
LY6G6F
ABHD16A
SCAND1
PGAP2
DNAJC30
BUD23
MRPS15
RAB3A
TMEM219
TDRKH
PEX3
ADAT2
SSBP1
HACD2
CDC42BPG
RAC3
LRRC45
CENPX
DROSHA
C5orf22
ZNF609
NPAS4
FDFT1
SSR3
STT3A
SPAG8
HINT2
C16orf72
TM9SF4
RAB5B
PMEL
CDK2
BBX
CHD6
HERC2
BMP5
AP3M2
COMMD2
GTF2H3
EIF2B1
ZNF212
MRM3
GLOD4
MRPL34
DDA1
ABHD8
DIAPH3
INTS1
ENPP4
CLIC5
WASHC2C
SYNGR3
GFER
CRBN
NDUFS3
KBTBD4
FAM180B
TESC
NOP53
PGD
PRRG2
NOSIP
PLA2G7
MGAM2
DNAJB5
SORT1
ZCCHC4
GLO1
WDR70
NUP155
TMX2
MED19
GTF3C3
C2orf66
CENPF
ATAD3B
STX18
ADPGK
RPS20
ZNF639
PPP6R1
PCOTH
PAN2
MIPEP
IL23A
FAM204A
CHMP3
C1QTNF9B
ARHGEF1
GATA2
TMED9
B4GALT7
RBBP5
CEP131
HSPA5
STK11
C7orf50
PDIA6
COA1
TRIAP1
COX6A1
COPZ1
CCDC77
WASHC2A
AKR1E2
RPTOR
PCNX3
MAP3K11
TMEM222
IMP4
CCDC115
ZNHIT1
PLOD3
HYOU1
SRPK1
ERCC1
SIN3A
ZNF830
CCT6B
RNF166
CTU2
POMZP3
CREBRF
DUX4
WDR74
STX5
RECQL4
MFSD3
LRRC14
LRRC24
ZSCAN22
PLEKHM3
TSPAN8
WHAMM
FSD2
EVI5L
NUF2
KIAA1841
CEP63
ANAPC13
ADD1
TPCN1
HEXA
IQCD
TOR1A
TIMM17B
PQBP1
FAF1
CDKN2C
TATDN3
NSL1
VPS50
HEPACAM2
LRRC37A3
COTL1
SLC39A13
MVP
ZNF680
ABLIM1
SYP
PRICKLE3
OPA1
ZNF789
ATP5MF-PTCD1
ATP5MF
MYH10
SIRT4
ANAPC5
BSPRY
MVD
CREB3L2
ERCC2