ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957490 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◣ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

DUX4
FRG2C
LOC102724770
DGCR6
MAMDC2
MTRNR2L1
KIF5C
FRG2
PRRG2
NOSIP
PLXDC2
NFKBIL1
DDX39B
ATP6V1G2
MTRNR2L2
MSH3
DHFR
MUC3A
CLCN5
ART1
SMAD7
PMEPA1
SKIL
LAPTM4B
PRKAB2
CHD1L
SIRT1
PITX2
TBC1D1
COPS8
BIRC7
DHRS3
LURAP1L
SERPINE1
MAN1A2
VKORC1
BCKDK
CRTC1
MTRNR2L8
TGIF1
ASIC3
RBPJ
ID2
TUBG1
RETREG3
IL20
JUNB
KLHL31
MMP20
ZNF148
ITGB5
LIMS1
F2
H2BU1
H2AW
GP9
ETS2
HOOK2
TEX45
PEX11G
ERCC1
AVEN
TNIP1
ID1
DLX3
NUP205
RNF103
PDLIM7
BMPER
COL7A1
SPACA6
CD44
DIAPH3
SULT1C4
SLC7A5
KDM6B
SERPINE2
USP35
PROC
DIXDC1
LMNA
PRR14
FBRS
LOXL1
PATJ
VAC14
HTRA1
GRAMD2B
SYNPO
PLN
NODAL
AGAP3
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
DMAC1
TMUB1
FASTK
OLFM2
GAD1
ALDH1B1
ZC3H3
GSDMD
SMYD3
DISP1
ID3
LRRC61
ACTR3C
DTNA
LAMB3
MRPL24
ASPN
SLC8A1
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
GAB1
TRIB1
UBAP1
C11orf91
PHLDB2
ANKRD34B
PDGFB
FSTL3
TTC39B
MYO6
RASGRP3
GALNT11
SMG9
AFAP1
RPGR
ZNF703
CASZ1
MIS18BP1
NDE1
MARF1
DNAJB2
RNF214
PCSK7
TNFRSF10A
HOXC9
HOXC10
NEURL1B
ZNF76
OTUD7B
SMAD3
ARHGAP22
WBP1L
FDXACB1
CMTM6
C11orf1
ALG9
IKZF5
ACADSB
ROR2
ME3
LAMC3
CST6
CDK5RAP2
ANXA8L1
PPP3R1
TBC1D22A
MTIF2
HCAR3
HCAR1
ARHGEF16
UBE2T
THEM4
PPP1R12B
RFPL4B
DNAJB5
PPP1R13L
POLR1G
JMJD1C
PDXK
TLE2
PEDS1-UBE2V1
PEDS1
STRA6
ECHDC3
CLDN14
SNX9
LEFTY2
PRR29
ICAM2
UMODL1
RAB12
GIP
C15orf39
BCL10
INSYN2A
ANK2
ABLIM1
FNIP2
BRD7
YPEL5
EPB41L1
STAM2
TOGARAM1
KLHL28
HDGF
LTBP2
TRIOBP
TGM4
AADAT
TMEM95
KCTD11
LRRC31
METTL17
RICTOR
LOC389199
KTN1
REN
FOXN3
CCPG1
C15orf65
TCTEX1D4
PRKCI
PLK3
BTBD19
TMEM263
KDSR
TYRP1
RNF213
PAX6
GPR63
ASB6
TNRC6B
C1QTNF7
TMEM63A
LEFTY1
FAM172A
MYADM
JUND
BMF
TRIM2
GID4
ATPAF2
LIMK1
GPR182
FMN1
DNAJB1
CHIC2
THAP9
SEC31A
KCTD21
SCAPER
PTPRN2
SNX25
CFAP97
TDGF1
LRRC2
RARA
PDLIM1
TSKU
STMN3
RTEL1
TRA2B
SMARCD3
ALOX5AP
FOSL2
YTHDF1
H3C4
ART4
ZNF540
TTI1
RPRD1B
DACH1
EP400
ASB5
BCAT1
NOTCH2
MCTP1
H4C5
H2BC7
H2AC7
TMEM229B
MMP10
CCDC33
PITPNM2
TAGLN2
ASS1
CGB5
ARAP1
PTPRB
PSMD2
CENPA
CTCF
TOMM20
FRMD5
FHL2
DSP
PLCXD3
PIWIL4
UVSSA
GNB2
SLC25A25
BMPR2
RBM27
SCD
PELO
ITGA1
DDAH1
CCN1
CCDC200
AMPD1
HPS4
ZBTB38
EPB41
SSBP3
ZNF341
CAV1
PLAGL1
EPS15
GPR1
CYP2B6
CSRNP1
NPM3
FGF8
FPR3
CALM2
ACOX2
CORO2A
BHLHE40
NOTCH2NLA
KPNA7
SMARCD1
ASIC1
AMOTL2
SREBF1
KANK1
CHRNA9
TM4SF1
SCX
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
IVNS1ABP
TMTC4
XRN2
B3GNT6
BAMBI
E2F3
BIN2
DENND2B
INPP4B
FGF17
DMTN
SPRED2
MTHFD1L
FLRT2
DGAT2
LRRC71
SNX18
MYL10
ENTPD6
DAAM1
TMEM242
TGFBI
ZNF571
COA7
SERPINB2
LAMC2
MS4A10
SCARF1
RILP
LIMK2
STOX2
KAT5
DYRK4
DERL3
ITGAE
ST3GAL4
LNX1
AGO1
FBXO32
RIC1
ALDH18A1
GATA4
PLA2G10
ITPKC
COQ8B
PLS1
TECR
PLAU
MRPL2
MOXD1
KLC4
CUL7
CXCR5
ABCC3
ZMIZ1
UAP1
USP2
SRSF10
ZNF592
WNT7B
KCTD7
GATM
EAPP
GAB2
OAZ1
MACO1
HOATZ
BTG4
ANGPTL4
EOMES
TNK2
RRM1
OVCA2
ITGB6
VPS28
CGB2
CGB1
CEP55
CCDC88A
ZNF212
GLIPR1L1
CAPS2
ANKLE2
TFPI
NPFFR2
HOPX
KLHL5
BMPR1B
EPSTI1
FDFT1
ACLY
HMGB2
PSD3
NUP153
LAMA5
DVL1
ZMPSTE24
TMCO2
MYEOV
GADD45B
ZBTB4
SLC35G6
POLR2A
NSMCE1
ARID3B
CLIP3
C1orf100
MYBPH
GAL
CHI3L1
TMPRSS11D
SLC2A2
DCTN4
BRAP
ACAD10
BEST3
NAIF1
GLIS3
CAMK2A
ARSI
UPK3BL2
SPDYE2B
SPDYE2
SLC35A4
APBB3
NOTCH2NLB
PF4V1
CXCL1
FST
RAB11FIP3
CABP7
TVP23B
FOXS1
UBR5
CCDC24
ARHGEF18
LTBP1
SPDYE1
SIRPA
CGB8
CGB7
ACOX3
PCNX2
MRPS16
PKP1
ALOX15B
SERTAD4
SARAF
CER1
WDR36
LPCAT1
PLXND1
CLTB
DOCK2
SYTL2
BET1
SIAH1
NFIC
CLCF1
LPCAT2
SLC39A13
WARS2
CHST3
ELAPOR2
SMARCA5
GNE
DCAF10
ZBED6
WSB1
CDCA4
IGF1
MFNG
AGFG2
WT1
TPRN
SSNA1
ANAPC2
MYT1
H4C9
H2BC11
H2AC11
SLC35F2
ILKAP
BACE1
ZSWIM5
UTP18
MBTD1
ZFR
PRSS53
PHC2
USPL1
HMGB1
CPT2
USP30
OSGIN2
S100A2
KMT2A
AHCYL1
SLAIN1
NBL1
MDFI
RAB28
MDN1
ISG15
LRRC37A3
MTNR1A
HAUS7
KLF10
IRF2BP1
CTNNB1
CREB3L2
CPNE2
C11orf42
ITLN2
RFTN1
MAFK
CALM1
PSKH1
NRN1L
MBD1
MDC1
KANSL3
FAM118A
IFT140
H2BC21
H2AC21
H2AC20
CRAMP1
BEAN1
ACP6
SLC39A4
VWA5B2
ZNRF3
FBXO3
DRAP1
C11orf68
RHOF
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
ANK3
MYOZ2
ZNF609
IFNA8
NUMB
DECR1
OCA2
SF3A3
TMPRSS9
SERPINB8
NAV2
ITPRIP
DDX47
FAT4
APC
TAF12
STK33
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LOXL2
LEMD3
CEP57L1
AGPS
SDR9C7
NOL4L
RGS10
LOC100287896
LIPT2
GJB5
GJB4
GAS2L1
BPGM
TTLL2
PDE4B
PDE6A
DNAJB4
ARMC9
CHST11
TMEM87B
RHOD
CSF2RB
ANXA8
STEAP2
NEDD4L
SLC6A15
PANK2
F2RL1
ABR
KLF7
NTMT1
KLRD1
SFT2D3
SERINC2
PAGR1
MVP
LPCAT3
BRIX1
ZG16B
VDAC1
WDR54
UNC50
COA5
C2orf81
PEAK3
HNRNPM
CNOT1
BMP5
SPON2
HEXB
PNRC2
MACIR
RUNX1
SOWAHC
SEPTIN10
GATAD1
SLC46A3
TBXAS1
KAT6A
SRSF6
IDO2
PPP1R15B
METTL11B
MINDY3
UQCRHL
TEAD1
B4GALT6
RNF223
CDKN2AIP
TUFT1
GNAL
DSC3
ZNF792
SP4
C12orf42
PGK1
CDKN1A
PRKACB
POU5F1
NDEL1
GCH1
FMN2
SHISAL1
ASB2
ZNF655
SLAMF1
MARCHF5
FAM200A
CPEB3
AXL
ABTB2
VPS36
SLC39A7
RXRB
RING1
MAP3K2
HSD17B8
GSC
CKAP2
POU2F3
FOXP1
MYL6B
KCTD1
HK2
EXT1
TNPO1
EPG5
NOS1AP
HMGA1
KRT36
KRT13
P4HB
CTPS1
ARHGDIA
NPAS4
CARD17
ATP13A2
STK38L
OSM
MAP2K3
PRMT5
ST3GAL2
OBSCN
GTPBP6
FZD9
MCM7
AP4M1
PHF19
FHL3
NRCAM
NPR2
FSD1L
UBE2B
H2AZ1
DNAJB14
CELSR1
CDKL3
WDR74
STX5
IL17B
AKT2
PTGIS
ZSWIM4
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
GOLGA6A
ETS1
LENG8
FXYD6-FXYD2
FXYD6
CHN2
CDH26
TMED8
SAMD15
LOC100505841
AFAP1L1
ZZZ3
SLC36A2
PIK3R6
ARMC7
SPTBN1
IL17RD
GADD45G
FSCN1
TUSC1
RAB17
CCNI
ANK1
SLC18A3
PRDM14
CSF3R
CHAT
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
SPATA9
SERHL2
RHOBTB3
IGFBP7
IFI35
FGF1
CALHM4
DUSP1
ASB8
POLD4
NEDD9
KRT80
LOX
C5orf46
BORCS5
SMIM35
PPP6R1
AK3
SIK3
ATP5IF1
ZNF575
GPR183
ETHE1
CYP27C1
NEDD4
C1orf74
DNMT3B
COMMD7
UHRF1
SHC4
PIK3CD
CRYAA2
CRYAA
BAIAP2
AMPD3
NUAK1
ZBED2
VWA3B
SRP14
FAM184A
ZNF189
PPP1CB
NOTCH3
MRPL50
BAAT
AKIRIN2
STX1A
KCNF1
GOLGA6D
FCHSD2
TSEN34
MYOM3
NDST2
ARHGAP24
WWC2
VOPP1
TADA1
CD8A
PDE2A
CABLES1
ACSS3
UBE2D3
FOXJ3
L3HYPDH
JKAMP
CXADR
LRP5
BLOC1S2
PCED1B
LRTM1
CREB5
ARL4A
AMIGO2
C2orf16
TSN
NIFK
NARF
CYBC1
CNNM1
JCAD
NKG7
ETFB
CLDND2
VDAC2
LBH
PLLP
EIF1AD
BANF1
IER3
FLOT1
CCN2
ZNF460
AMHR2
DYRK2
MYOM1
ITGB1
ZFP36L2
FAT1
TACC2
NSMCE4A
KRTAP21-3
RASL10A
BCL11B
RAD23A
CLTC
CALR
SUCLG2
LRP12
FAM170B
SLC2A14
PRRT2
PAQR9
OSBPL9
MAZ
MATN2
KCNK9
FZD6
COMMD1
ARHGAP39
HS3ST2
HNRNPA2B1
CBX3
CALD1
ARL13B
TSPAN9
PURA
SPTAN1
KANK4
EML1
UQCRB
HSP90AB1
ETAA1
RAB26
PRRT1B
GTF2B
ZNF720
NOCT
MAPK13
IL6
GPR37L1
SPRR1B
LRP6
BEX3
ANGPTL3
AFF1
POU2F2
PALD1
MARCHF10
NEK6
MAP3K9
EGR3
UPK3BL1
FBXL7
BCL11A
LHB
FRMD4A
CGB3
KLF4
NUF2
COL16A1
AXIN2
PANX1
CHD2
TENM3
SETD6
MLLT11
CLDN4
CDC42SE1
RRNAD1
ISG20L2
LDHAL6B
CD2AP
TMEM40
SLC3A2
NAA80
IFRD2
HYAL3
EPB42
ADAMTS1
GNA12
GREB1
PRND
DACT2
SRARP
ROR1
HSPB7
CLCNKA
CHMP1B
SGK1
HS3ST1
HMOX2
H4C12
H4C11
YARS1
S100PBP
REV3L
S100A10
PXN
SCG2
RPRM
GAD2
ATG9B
PCK2
NRL
NCR1
CEMIP
WNT3
TEX46
SMAP1
KRTAP9-1
KRTAP4-2
KRTAP4-1
KDM1A
GJB3