ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957398 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◣ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PRKAB2
CHD1L
MTRNR2L1
SMAD7
PGK1
H2BC11
H2AC11
DUX4
SKIL
FBRS
COPS8
MTRNR2L2
MSH3
DHFR
PRRG2
NOSIP
ZNF148
NFKBIL1
ATP6V1G2
FSTL3
FRG2
PDLIM7
SMYD3
JMJD1C
BAMBI
DHRS3
ERCC1
UBE2B
CDKL3
MTIF2
ACVR1
ID2
LPCAT3
ZNF341
ASIC1
ID1
SLC39A13
KAT5
SPACA6
IFRD2
SMARCD3
KANK1
GLIPR1L1
CAPS2
TBC1D13
SERPINE1
FDXACB1
C11orf1
PPP6R1
DRAP1
C11orf68
ID3
LRP12
OAZ1
WBP1L
OVCA2
MOB4
KDM6B
FSCN1
OBSL1
INHA
GNB2
TUBB
MDC1
NFAT5
FBXL13
ARMC10
STX4
SAMD11
WDR74
OLFM2
BMF
ZNF641
ZBTB39
ZNHIT1
PLOD3
GRHL3
EP400
MIPOL1
KMT2A
UBE2F
KLF3
PMEPA1
LAPTM4B
SIRT1
TBC1D1
FRG2C
BIRC7
LURAP1L
MAN1A2
TGIF1
RBPJ
TUBG1
RETREG3
IL20
MTRNR2L8
KLHL31
MMP20
LIMS1
F2
TEX45
TNIP1
DLX3
RNF103
COL7A1
SULT1C4
SLC7A5
SERPINE2
VAC14
PITX2
NODAL
AGAP3
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
LMNA
DIAPH3
GAD1
GSDMD
DISP1
LRRC61
LAMB3
TNFRSF12A
CLDN6
GAB1
TRIB1
PHLDB2
ANKRD34B
TTC39B
MYO6
RASGRP3
CASZ1
MIS18BP1
NDE1
MARF1
THOC6
HCFC1R1
OTUD7B
SMAD3
ARHGAP22
SLC8A1
CMTM6
IKZF5
ACADSB
ROR2
ME3
CST6
CDK5RAP2
ANXA8L1
PPP3R1
HCAR3
THEM4
PPP1R12B
DNAJB5
PPP1R13L
POLR1G
ECHDC3
CLDN14
LEFTY2
ICAM2
GIP
C15orf39
BCL10
INSYN2A
BRD7
YPEL5
EPB41L1
STAM2
TOGARAM1
KLHL28
FNIP2
HDGF
ABLIM1
AADAT
TMEM95
KCTD11
METTL17
SMG9
RICTOR
KTN1
CCPG1
C15orf65
TMEM263
KDSR
TYRP1
PAX6
GPR63
LEFTY1
FAM172A
MYADM
GID4
ATPAF2
TGM4
LIMK1
FMN1
DNAJB1
SEC31A
SNX25
RARA
TSKU
STMN3
ALOX5AP
ZNF540
DACH1
BCAT1
MCTP1
H4C5
TMEM229B
ANK2
MMP10
CCDC33
PSMD2
CENPA
CTCF
PDGFB
PEDS1-UBE2V1
PEDS1
FHL2
DSP
PLCXD3
PIWIL4
RBM27
SCD
ALDH1B1
PELO
ITGA1
DDAH1
CCN1
AMPD1
TNRC6B
EPB41
SSBP3
CAV1
PLAGL1
EPS15
CSRNP1
NPM3
FGF8
SREBF1
CHRNA9
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
IVNS1ABP
TMTC4
XRN2
B3GNT6
PLK3
E2F3
FGF17
NEURL1B
FLRT2
DGAT2
SNX18
MYL10
ZNF571
MS4A10
RILP
LIMK2
STOX2
DERL3
AGO1
ALDH18A1
TAGLN2
ITPKC
COQ8B
PLS1
TECR
PLAU
MRPL2
MOXD1
KLC4
CXCR5
ABCC3
UAP1
USP2
SRSF10
MACO1
LRRC2
TRIOBP
RRM1
VPS28
CGB5
CGB1
CEP55
CCDC88A
ANKLE2
NPFFR2
HOPX
KLHL5
EPSTI1
FDFT1
PSD3
NUP153
DVL1
TMCO2
GADD45B
ZBTB4
SLC35G6
POLR2A
CLIP3
MYBPH
TMPRSS11D
SLC2A2
BRAP
ACAD10
BEST3
SLC25A25
NAIF1
INPP4B
HOATZ
BTG4
ARSI
UPK3BL2
FST
CABP7
UBR5
ARHGEF18
LTBP1
BMPR2
CGB8
ACOX3
SERTAD4
SARAF
CER1
WDR36
CLTB
MTHFD1L
BET1
SIAH1
NFIC
CLCF1
DENND2B
WARS2
CHST3
ELAPOR2
LAMC2
DCAF10
CDCA4
MFNG
AGFG2
FPR3
SLC35F2
ILKAP
BACE1
UTP18
MBTD1
ZFR
PRSS53
USPL1
HMGB1
USP30
OSGIN2
AHCYL1
SLAIN1
MDN1
LRRC37A3
MTNR1A
ZNF592
HAUS7
PTPRB
KLF10
CTNNB1
CPNE2
C11orf42
RFTN1
CALM1
TFPI
PSKH1
MBD1
FAM118A
H2BC21
H2AC21
H2AC20
VWA5B2
ZNRF3
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
MYOZ2
ZNF609
NUMB
C1QTNF7
DECR1
OCA2
SERPINB8
ITPRIP
APC
NSMCE1
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LEMD3
AGPS
NOL4L
LOC100287896
LIPT2
GAS2L1
DNAJB4
CHST11
RHOD
CSF2RB
ANXA8
SLC6A15
PANK2
KLRD1
LOC389199
SERINC2
BRIX1
VDAC1
WDR54
C2orf81
CNOT1
SPON2
MACIR
RUNX1
SOWAHC
SEPTIN10
GATAD1
SLC46A3
TBXAS1
KAT6A
C1orf100
SRSF6
METTL11B
MINDY3
B4GALT6
RNF223
CDKN2AIP
ZNF792
SP4
CDKN1A
POU5F1
NDEL1
SHISAL1
CPT2
ASB2
ZNF655
MARCHF5
CPEB3
AXL
ABTB2
SLC39A7
RXRB
RING1
HSD17B8
CKAP2
POU2F3
EPG5
PHC2
NOS1AP
CTPS1
ARHGDIA
NPAS4
MAP2K3
PRMT5
ST3GAL2
OBSCN
GTPBP6
MCM7
AP4M1
PHF19
H2AZ1
DNAJB14
IL17B
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
LENG8
FXYD6-FXYD2
FXYD6
TMED8
SAMD15
ZZZ3
SLC36A2
ARMC7
SPTBN1
GADD45G
RAB17
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
IFI35
FGF1
DUSP1
ASB8
POLD4
S100A2
NEDD9
KRT80
LOX
C5orf46
SMIM35
SIK3
ZNF575
GPR183
ETHE1
OSM
UHRF1
PIK3CD
BAIAP2
AMPD3
ZBED2
FAM184A
PPP1CB
NOTCH3
AKIRIN2
STX1A
KCNF1
GOLGA6D
FCHSD2
SPDYE1
MYOM3
ARHGAP24
WWC2
VOPP1
TADA1
CD8A
CABLES1
ACSS3
FOXJ3
CXADR
BLOC1S2
LRTM1
NARF
JCAD
BHLHE40
ETFB
VDAC2
LBH
CCN2
ZNF460
AMHR2
DYRK2
MYOM1
NSMCE4A
KRTAP21-3
BCL11B
CLTC
MAP3K2
SLC2A14
PRRT2
PAQR9
PAGR1
MAZ
MATN2
KCNK9
HS3ST2
HNRNPA2B1
GLIS3
CBX3
CALD1
PLXDC2
KANK4
FAT4
UQCRB
HSP90AB1
ETAA1
GTF2B
ZNF720
NOCT
MAPK13
IL6
GPR37L1
LRP6
AFF1
POU2F2
PALD1
MARCHF10
MAP3K9
UPK3BL1
FBXL7
BCL11A
CGB3
KLF4
CALM2
SFT2D3
NUF2
GJB4
COL16A1
CHD2
TENM3
SETD6
MLLT11
CDC42SE1
RRNAD1
NTMT1
ISG20L2
EPB42
TUSC1
DACT2
CCDC200
ROR1
SGK1
REV3L
PXN
SCG2
RPRM
UQCRHL
NEDD4L
CEMIP
WNT3
TEX46
KRTAP4-2
KRTAP4-1
EOMES
CMYA5
CFLAR
ALDH7A1
TES
C2orf74
IL34
MRI1
HEXB
CDHR2
TOMM20
PCK2
NRL
CPD
RET
PAWR
AQP3
PLEC
KANSL1L
GOLGA6A
UBA1
STK40
PITPNM3
TMEM107
INPP5A
MTMR11
DST
SCNN1A
PCIF1
NUP214
LTBR
FOXS1
STK10
MTFP1
EIF4E
CXCR4
CDH15
SUPT6H
SDF2
FAM20C
ANK3
BEGAIN
PURA
PLEKHA7
SLC38A9
SHKBP1
PRDM10
IGF1R
CSGALNACT2
GCNT1
ATF7-NPFF
ATF7
ZNF354A
MAMDC2
PRDX1
ERRFI1
SLC25A45
FRMD8
EXT1
C5orf63
MUC3A
MED23
TXK
TTLL2
BCAR1
ZNF296
GEMIN7
RNF11
AGBL2
H2AX
CCT5
ATPSCKMT
PRICKLE1
KCNJ16
CCNI
PALM2AKAP2
ZSWIM4
HRG
ZFAND2A
RRBP1
DOCK9
COL3A1
H4C11
PPP2R2A
NDUFS8
IGF1
UQCRC1
DAB2
SRSF7
SMIM8
MTF2
H1-2
GRAMD4
ZC3H6
KCNK3
DSTYK
ABHD17C
TTLL8
SLC7A2
MTRNR2L9
MIXL1
TCF7
PRC1
ARHGAP28
LONP2
FLNC
FAM178B
ABCC11
LRP5
H4C12
CTNNA1
AGXT2
POLDIP3
PIM1
NCAPH
RHOB
FAP
ENOX1
B4GALT7
SETD5
COMMD1
SNX14
OR4F3
OR4F29
OR4F16
F13A1
ATXN7L2
TNFAIP3
RCAN3
PARL
LOC100509620
USP53
USP42
SEC24B
RCC1
AKAP13
TTC9
RAB33A
ETS1
BCAP31
ARHGEF4
ABCD1
UGT1A3
LARS2
HEXIM2
UBE2D2
SPOCK3
RAB27A
GRIA4
SETD1B
P2RY2
KPNA7
BUD13
ASCL3
SLCO5A1
PAFAH1B1
DGLUCY
SLC5A3
MRPS6
MEF2D
CSKMT
C3orf20
C11orf98
INAVA
ADGRG1
SLC4A8
S100A10
ITLN2
GALNT6
ZBTB45
SLC51B
SH2D7
PIEZO1
GSDME
TRPC1
MARCHF7
FEM1C
ZNF853
TMEM272
IGFBP3
RRM2B
PTHLH
NR2C2
NPC1
NIBAN2
C2CD2
B4GALT2
ATP6V0B
ARL6IP1
TRDMT1
TP53TG5
SLC44A1
RPL23
IL17RA
RHOBTB2
LIMS2
ISG15
HEXIM1
BPTF
AGRN
RRAD
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UBAP2
TRAM1
NTN1
CSRNP2
C12orf65
ANGPT2
ZNF165
SOX18
DENR
ADGRF2
ZSWIM7
TTC19
SLC20A1
RNF213
MYT1
GNAL
ITGAE
KRT19
ANKDD1A
SRSF2
MFSD11
GTF3C3
ANAPC11
ALYREF
ZNF558
TRIM55
PTPRE
MARS1
LAMA5
DPPA4
ARHGAP9
ABR
SRSF5
SPDYE14
SPDYE10P
LOC100130520
CD300H
TIPARP
TEAD4
SEC62
LMO4
KMT5B
H2AZ2
ZNF143
MTHFD2
THAP4
VIM
SACM1L
RND1
NOS3
MAST2
FAM83A
SAMD14
RIMBP3C
RIMBP3B
KMT2E
CDC37L1
SKP1
RNF32
FZR1
ADAM19
USP22
TTF1
TMEM40
SBF1
ELMO1
CFAP77
ATAD2
GUCA2A
CRCP
TTC32
OR9I1
NINJ1
ITGA5
HNRNPD
RAD54L2
CDHR3
HOXD13
EVX2
TMOD1
IKZF3
H2AW
DNAJA1
APTX
ADAMTS18
ZAP70
TUBA1C
STAT5B
TPI1
TINAGL1
RHOG
GNAS
GALNT9
ATP6V1B2
MAP7
LDLRAD4
TNPO1
RAI1
BMP8B
VGLL3
TRABD2A
TMEM185A
SEMA3E
SCOC
LHX1
DDI2
CAMSAP2
XPO1
NUDT15
IGF2BP1
ADCY10
ACSL3
VANGL2
SLC38A2
PXT1
KCTD20
TTYH1
IL21R
R3HDML
FOXI1
VAMP1
NAPRT
MROH6
MLXIP
AGPAT3
MECOM
LSM14A
LBR
MCL1
HERPUD2
BTG1
RBMS1
CCL20
AP1AR
SNX16
PIK3R3
MARCHF3
ADAMTS5
SHCBP1
TMEM242
QPCT
GOLGA6B
UNKL
PARK7
IVL
HSPB7
GRIK2
CREB5
CHN1
YOD1
S100P
PFKFB2
NRCAM
NDST2
MMP9
FOXN4
ELN
ATP9B
UBE2Z
SSBP2
SPRR1B
KDM4A
HOXB13
CSF1R
C1R
C11orf86
SYT14
SLC35E1
RCOR3
MAT2A
LOC102724265
FGFR4
RCBTB2
CELA3B
TMSB4X