ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957398 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◣ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PRKAB2
CHD1L
PGK1
H2BC11
H2AC11
SKIL
FBRS
COPS8
MTRNR2L2
PRRG2
NOSIP
ZNF148
NFKBIL1
ATP6V1G2
FSTL3
JMJD1C
BAMBI
DHRS3
UBE2B
CDKL3
MTIF2
ACVR1
LPCAT3
ZNF341
ID1
SLC39A13
SPACA6
IFRD2
SMARCD3
CAPS2
TBC1D13
SERPINE1
FDXACB1
C11orf1
PPP6R1
DRAP1
C11orf68
LRP12
WBP1L
OVCA2
MOB4
OBSL1
INHA
GNB2
MDC1
NFAT5
FBXL13
ARMC10
STX4
WDR74
OLFM2
ZNF641
ZBTB39
ZNHIT1
PLOD3
EP400
MIPOL1
KMT2A
UBE2F
KLF3
SIRT1
PMEPA1
TGIF1
RBPJ
TUBG1
RETREG3
IL20
MTRNR2L8
DLX3
RNF103
COL7A1
NODAL
CCDC92
GAB1
TRIB1
TTC39B
SMAD7
TNFRSF12A
OTUD7B
CMTM6
IKZF5
ACADSB
ME3
THEM4
PPP1R12B
PPP1R13L
POLR1G
ICAM2
INSYN2A
BRD7
STAM2
TOGARAM1
KLHL28
ABLIM1
KCTD11
RICTOR
CCPG1
C15orf65
TMEM263
KDSR
PAX6
RASGRP3
LEFTY1
FAM172A
MYADM
FMN1
DNAJB1
SNX25
CST6
MMP10
CCDC33
PSMD2
CENPA
CTCF
PEDS1-UBE2V1
PEDS1
PELO
ITGA1
TNRC6B
EPB41
CAV1
FGF8
KCNN3
IVNS1ABP
TMTC4
PLK3
FLRT2
DGAT2
SNX18
ZNF571
ZNF540
LAMB3
STOX2
DERL3
ALDH18A1
TAGLN2
COQ8B
TECR
MRPL2
KLC4
DISP1
UAP1
LRRC2
TRIOBP
RRM1
CCDC88A
NPFFR2
CHRNA9
TMCO2
ZBTB4
POLR2A
BRAP
ACAD10
SLC25A25
NAIF1
INPP4B
BMPR2
ACOX3
SERTAD4
SARAF
CER1
WDR36
BET1
SIAH1
NFIC
CLCF1
ELAPOR2
LAMC2
DCAF10
MFNG
SLC35F2
ILKAP
ZFR
USPL1
HMGB1
AHCYL1
LRRC37A3
CXCR5
ZNF592
KLF10
CTNNB1
CALM1
PSKH1
FAM118A
H2BC21
H2AC20
VWA5B2
ZNRF3
ZNF609
SERPINB8
ITPRIP
MTHFD1L
LUC7L2
LEMD3
NOL4L
LOC100287896
LIPT2
DNAJB4
CSF2RB
PANK2
KLRD1
BRIX1
VDAC1
CNOT1
SPON2
MACIR
GATAD1
SLC46A3
KAT6A
SRSF6
METTL11B
RNF223
CDKN2AIP
SP4
CPT2
ZNF655
MARCHF5
CPEB3
AXL
HSD17B8
MAP2K3
PRMT5
DDAH1
TFPI
IL17B
LAPTM5
SLC1A4
LENG8
UPK3BL2
ZZZ3
GADD45G
TBC1D7-LOC100130357
TBC1D7
ASB8
POLD4
S100A2
KRT80
LOX
GPR183
EPSTI1
AMPD3
ZBED2
NOTCH3
DENND2B
KCNF1
FCHSD2
CPNE2
ARHGAP24
WWC2
VOPP1
CD8A
ACSS3
FOXJ3
CXADR
BLOC1S2
JCAD
VDAC2
CCN2
MYOM1
KRTAP21-3
GAS2L1
CLTC
SLC2A14
PRRT2
HNRNPA2B1
CBX3
UQCRB
HSP90AB1
GTF2B
IL6
LRP6
AFF1
SOWAHC
SEPTIN10
UPK3BL1
CALM2
NUF2
MLLT11
CDC42SE1
NTMT1
CCN1
BEST3
SGK1
REV3L
NEDD4L
MRI1
PCK2
RET
PAWR
AQP3
PLEC
KANSL1L
PITPNM3
DST
PCIF1
EIF4E
BEGAIN
PURA
SLC38A9
SHKBP1
MINPP1
ZNF354A
PRDX1
ERRFI1
SLC25A45
MED23
GEMIN7
RNF11
AGBL2
H2AX
CCNI
ZSWIM4
CHST11
DOCK9
ALOX5AP
H4C11
PPP2R2A
NEDD9
MTF2
ZC3H6
DSTYK
TTLL8
MTRNR2L9
MIXL1
PRC1
ARHGAP28
FLNC
H4C12
CTNNA1
AGXT2
POLDIP3
PIM1
RHOB
ENOX1
B4GALT7
SETD5
SNX14
F13A1
ATXN7L2
RCAN3
PARL
USP53
USP42
SEC24B
TTC9
SREBF1
LARS2
HEXIM2
UBE2D2
GRIA4
P2RY2
KPNA7
BUD13
SLCO5A1
PAFAH1B1
CSKMT
C11orf98
DNAJB14
E2F3
ZBTB45
SH2D7
TRPC1
FEM1C
ZNF853
NPAS4
RRM2B
NR2C2
NIBAN2
ARL6IP1
TRDMT1
TP53TG5
SLC44A1
DECR1
RHOBTB2
HEXIM1
BPTF
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CSRNP2
C12orf65
ANGPT2
ZNF165
DENR
ADGRF2
ZSWIM7
TTC19
SLC20A1
RNF213
GADD45B
SRSF2
MFSD11
SRSF5
NOCT
TIPARP
TEAD4
LMO4
KMT5B
ZNF143
MTHFD2
BHLHE40
MAST2
GTF2A1
KMT2E
CDC37L1
SKP1
RNF32
GNAL
ADAM19
USP22
TTF1
ATAD2
GUCA2A
NINJ1
HNRNPD
CDHR3
ZNF664-RFLNA
ZNF664
DNAJA1
APTX
STAT5B
GNAS
MAP7
LDLRAD4
TNPO1
RAI1
BMP8B
SEMA3E
CAMSAP2
XPO1
NUDT15
CALD1
ACSL3
VANGL2
SLC38A2
IL21R
FAM184A
R3HDML
VAMP1
MROH6
RUNX1
LSM14A
MCL1
HERPUD2
BTG1
RBMS1
SNX16
PIK3R3
MARCHF3
KANK1
TMEM242
QPCT
UNKL
PARK7
GRIK2
CREB5
CHN1
YOD1
UBE2Z
SSBP2
SPRR1B
KDM4A
CSF1R
USP30
SYT14
SLC35E1
RCOR3
MAT2A
RCBTB2
TMSB4X
NDRG2
TTC6
PARP2
FOXA1
H4C3
RPLP0
ATL2
TMEM184A
TFF1
SRSF7
OCIAD2
DESI2
PSRC1
ACTBL2
HMGN2
CPA4
ARIH1
TDGF1
STK17A
JUND
BMP8A
EIF4G2
AMOTL2
ID4
CYB561
ARIH2
RNFT1
EIF2AK3
ZNF48
SH3BP4
PXK
KBTBD2
PCID2
FABP6
CUL4A
RAD23A
GNL2
ZRSR2
MSANTD3
MRPL38
DNAJC28
DCP1A
ZNF587B
TNFSF4
SYN2
UROD
SLC19A2
HNRNPR
HECTD3
FN1
FERMT1
UBN2
RPL5
NOTCH2NLC
ADGRG1
TM6SF1
FUS
ESM1
C2CD2
ZSCAN22
SRSF3
PALLD
PABPC1
NARF
GLUL
CYP3A5
TCTEX1D4
RXRG
CCDC50
ACOT7
PTGS2
PSMD10
LRCH4
LIMS1
HERPUD1
FBXO24
ATG4A
ZNF713
TLE2
FLVCR2
ZBTB37
GSK3B
TMIE
TBC1D5
RPL24
ALS2CL
STK40
PTPRD
NR1H3
NDUFAB1
DNAJB2
ACP2
GBA
TRAK1
RWDD1
CLSTN1
ANKRD46
TGOLN2
SMAP1
RCL1
LIMK2
HNRNPH1
SPTAN1
CIRBP
CDK5RAP2
RIN1
PDPR
PCSK1
PHACTR2
NSUN6
H3C6
KRT16
KRAS
H1-2
ARID5B
PMAIP1
HPCAL1
CCDC7
APOL3
UCKL1
MET
LAMA3
KANSL2
EML1
RAPH1
PTEN
PCCA
KLLN
TBX22
PLPPR3
KTN1
IMMT
AASDH
THRB
RGPD8
RGPD6
RGPD5
BOD1L1
TRA2B
PNMA1
PKHD1L1
CLSPN
SLC7A6
RABEP1
PNRC2
LRRC59
HRH1
ZBTB5
UBAC1
PAXBP1
MAML3
TRAF7
RPL3
TMBIM6
RAPGEF2
PTPN18
DDN
WDFY1
UBXN8
UBE2S
SIRT4
PCDHAC1
KNTC1
GRM1
SYTL2
RELA
OAZ1
DNAJC6
ARL4A
MKNK2
IL13RA1
C3orf52
BCL9L
NUTF2
MYLIP
KRT8
FOS
CENPT
ARL15
ZFYVE16
SNRNP70
SMIM8
ZNF34
LOC107986453
GATAD2B
FILIP1L
COPS7B
CKM
ADPGK
VCL
SERPINB6
RUNX1T1
HOXA2
ACSM4
UBL4A
RAB23
BAZ2A
ZNF521
NAGK
JUNB
JAM2
GPR180
FSCN1
ARF4
ANKRD17
RPL13A
PDE2A
DMPK
VIM
SESN2
MICU2
LDHA
DUSP1
ZFAND5
VPS26C
TRMU
SECISBP2
PPP1R14B
NUAK1
NCOA3
FAM168A
RPS12
RAD54L2
POLR3D
HTR5A
HSPA5
HINT3
CCDC9B
USP47
TTI2
SNX30
NDST1
MDFI
FAM168B
DMXL2
RPL12
PRKRA
PJVK
NR1D1
NFIA
LRSAM1
JPT1
HSPA1B
FBXL12
CYTH2
ASCC3
ZC3H7B
SLC34A2
SDHAF1
RANGAP1
MYLK3
LGR5
DENND6A
DDX5
ARAP2
SFR1
KRTAP2-4
IL17RD
FGF1
DLC1
KDM1A
IER5L
FAM53C
CDC25C
SRF
MARCHF4
JDP2
FAM162A
CCDC58
C4orf36
SPAG9
H3-3B
GPR68
XKR7
TOB1
SFPQ
PCDHGC5
NEDD4
HEATR5A
CSE1L
USP15
POLE3
KHK
CYP19A1
C9orf43
AMOTL1
XPO5
TSPAN12
TRMT112
PRND
PRDX5
POLH
CYP2S1
ADAMTS1
ZNFX1
UBC
PPT1
PFKFB3
NYAP1
NXF1
GTF2H2C_2
GTF2H2
ZNF529
TUFT1
REEP5
DEPP1
ACTL6A
SERP1
S100A10
RSU1
LARP1
IER5
EIF2A
CALR
UBL3
SOCS1
TRA2A
SAR1B
MAT2B
KDM5C
BDH1
TMEM183B
REST
NDRG1
MFSD12
DDX59
COQ10B
C9orf40
ZFAND2B
ZCWPW1
RPLP1
MTDH
MEPCE
KDM5B
ID2
DNAJC25-GNG10
DNAJC25
TAF8
SYNJ1
SLC24A2
RRP8
MTRNR2L6
MRPS18B
MRPL39
ILK
CSRNP1
TMEM18
TMEM121B
MFAP3L
FAM227B
DTWD1
SREK1
SMPD4
NUDCD1
MZT2B
MECOM
H2AZ1
GLT1D1
APOBEC3D
ANKRD18A
USP37
UBR4
TMEM258
TMC7
SYT12
SH3BGR
PLEKHA8
NASP
KRT19
IFT52
GSN
FEN1
CNOT9
CLDN4
C12orf57
ATP2A2
SYNRG
PBX2
NRSN1
L3HYPDH
KIT
JKAMP
IQSEC3
HDDC2
ERLEC1
ASB3
SFT2D3
S100A13
GGT7
E2F2
CHTOP
ZNF839
TLCD5
RPS2
MMP24OS
MMP24-AS1-EDEM2
MCOLN1
MAK16
IGF2BP3
EEF1A1
DDX1
TNFAIP1
RGS4
NMRAL1
KLF7
IFT20
HNRNPC
HMOX2
FRA10AC1
ELF2
EIF2B2
CHST13
BRD2
ARRDC3
UBB
TJP1
SLC4A2
SELENOO
SDCBP
RFESD
PPCDC
PIGO
NCOA5
MEX3B
KAT7
EEF2
CDK5
CCNH
ZNF207
TRIP10
TAF1D
TAF15
PSMD14
GLRA3
CHMP4A
CDKN2AIPNL
C11orf54
AVPR1B
APOBEC3F
AGO3
RBP5
PTBP2
OAT
MAPK1IP1L
H4C15
H4C14
H2AC19
H2AC18
GCNT1
ENKUR
CRBN
TMEM250
SHF
MICALCL
LUC7L
DHPS
CEMIP2
ZNF518A
SULT2B1
SRI
SLC39A10
SLC25A51
RNF44
NABP1
MNAT1
JUN
IFRD1
HEXB
DDIT3
CPVL
AMD1
ZNF764
TCEAL8
LOC728392
CORO6
CLDN6
TMEM215
RTN4
RNF6
MORF4L1
KIF27
KCNMA1
ERMP1
UBE2D3
PRSS23
HDAC4
RBM14-RBM4
RBM14
LRCH1
KLHL18
KIF9
EXD1
CPNE4
CHP1
ZNF524
TM2D1
TBPL1
PDIA3
MED13L
LGMN
GARS1
FIZ1
DDIT4
ZSCAN31
ZNF395
ZNF197
SPSB2
PGAP2
MYO6
EXOC2
ERI1
CBWD5
CBWD3
TRIQK
TP53INP1
TMEM132A
STX16
RPS20
PIEZO1
PDE1C
LAYN
GRM2
EIF4A2
CCNL1
WDR1