ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX682379 | TSU-1621MT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ARSG
INAFM2
CMTM7
SH3BP1
PARK7
CCDC88A
ARID5A
DIAPH1
GRHL3
CCPG1
C15orf65
USP15
LYL1
NRROS
POR
SLCO4C1
IQCH
AAGAB
ARID3B
SPATC1L
RASSF2
C11orf24
SASH3
MRPL34
DDA1
ABHD8
PPIB
NDUFA4
MTMR4
SEPTIN4
TRAF4
TBC1D10C
PPP1CA
CARNS1
NDFIP2
DISP2
BIN2
WNT1
WNT10B
PLEKHO2
KAZALD1
CYCS
FGR
TRIM65
MRPL38
SKIV2L
NELFE
ZCCHC3
C20orf96
KCTD6
KMT2E
ADCY7
ID3
RNF149
LNPEP
NBPF1
NAA80
IFRD2
HYAL3
NR1D1
MYBPC3
NBEAL2
CCDC12
NOTUM
SRPRA
TMEM222
SH3BP2
KCNAB2
RASSF5
HEBP2
SNX3
TRMT6
MCM8
MRPS24
DYNLL1
FAM110A
MAP2K1
JAK3
TBRG4
FAF2
MTCH1
THRAP3
SSX2IP
SNAPC3
AHDC1
EMP3
CCDC114
CYP2E1
SLC39A13
SLC35E2B
CDCA7L
ZNF76
NOTCH2NLA
LUZP1
GPR108
TRIP10
ATP23
TRERF1
DUSP6
RWDD2A
PGM3
DGAT2
PRKDC
MCM4
PEX3
ADAT2
POLR2J3
VAV1
SH2D3A
NOTCH2NLC
ATAD3B
ATG16L2
CTTN
PRDM10
KCNH2
SLC35E2A
PIP4P2
ZDHHC4
VPS37C
C1orf159
KMT2A
NOTCH2
PRDM1
SH3TC1
TIGD5
EEF1D
RER1
MORN1
RFESD
STAT1
ZNF25
BUD13
FAM227B
DTWD1
YBX2
NCBP2AS2
NCBP2
ATAD3A
UFC1
USP21
PPOX
DENND2D
ASNS
NOTCH2NLB
KIF1C
INCA1
CAMTA2
RAD50
CPT1A
HPF1
RPS6KA1
TDP2
CNOT6
ACOT13
DPP9
CD164
RNF139
RNF125
STAP2
YY1AP1
DAP3
UBE2L3
RIMBP3C
RIMBP3B
PLEC
IL21R
UBL7
PKM
MYCBP2
AKIRIN1
ELANE
CFD
PTDSS1
MTERF3
MRTO4
EMC1
C21orf91
RNF103-CHMP3
RMND5A
KBTBD11
LANCL2
PDP2
HMGCL
MAGEF1
MTMR1
RITA1
DDX54
ASH1L
GTF2H3
EIF2B1
IQCE
BRAT1
DISP3
CDK5R1
RXRA
TAS1R1
NOL9
TMEM250
UBIAD1
SBF1
SEBOX
TMEM199
POLDIP2
MAPK6
DDX23
DLX2
SBNO2
FNTA
RPL17-C18orf32
RPL17
C18orf32
RASA4
CEP135
NOC4L
DDX51
ZFAND2A
CARMIL1
BRAP
ACAD10
ARF3
IL6R
FKBP1A
GSPT1
SEC14L1
CLIC4
RPS3
C12orf65
IQGAP2
ZNF517
ZNF34
RPL8
TKFC
DDB1
CHST11
ZNF219
TMEM253
INTS1
MAPKAPK3
CISH
CD151
NMNAT1
LZIC
TSPAN4
POLR2L
FCHSD2
RIMBP3
TMEM65
MEF2D
FAF1
CDKN2C
DYNC2H1
PCMT1
PTP4A3
LYPLA2
GALE
PDXK
PPIL4
MRPL20
CCNL2
C6orf89
RCC2
HYLS1
ZWILCH
SNAPC5
RPL4
PDE4D
SMAD3
ZNF318
RASA4B
PPP4R3B
BCL3
NOXO1
CLTC
TBL3
RPS2
RNF151
RAC2
ZBTB17
PRKAB1
PSMF1
NUS1
SFN
LOC102724265
ARF4
FOS
RBSN
USP42
HDAC7
TMEM41A
CMTR1
CLN5
MAPKAPK5
RGS14
LMAN2
CTSC
RNF216
TRAM1
PRR19
PAFAH1B3
MT2A
PRKAG1
FLT3LG
PPP1R8
NDUFV1
BOD1L1
SPTBN5
LSM5
AVL9
GARS1
ZBTB12
EHMT2
C2
PPP1R1B
STARD3
SMIM41
ATG101
CDC42
ARHGAP27
CCDC200
IQSEC1
IDS
ZNF774
ABCF1
USPL1
HMGB1
FXYD2
MYO1G
WDR53
SEC13
FBXO45
DTX2
DHDDS
CBFA2T3
RCN2
RERE
SDE2
MT1H
MT1G
CBWD5
CBWD3
CBWD6
ADPGK
TRNAU1AP
EXD1
CHP1
FAM120B
TESMIN
ABHD12
TPP2
RNF34
HBS1L
NFKBIA
RFC2
PYCR3
GFUS
ZC3H6
RNF19A
B3GALNT2
TUBB3
MC1R
MCU
CCNDBP1
HUS1
TCTE3
ERMARD
THYN1
ACAD8
KCNC3
PHF13
DPEP1
EHD1
TMEM262
ZFPL1
CDCA5
PCNA
TMEM230
SLC35A1
MESD
EIF3B
EIF1B
RPLP1
PROX2
TAF15
DHRS4L2
DHRS4
TAF12
ZZZ3
CDS2
DCP1A
PIK3AP1
PEAK3
RWDD1
SNAP29
PI4KA
GZF1
ZCCHC4
SOAT2
IGFBP6
PSMD12
FBXL18
TRIAP1
COX6A1
RANBP3
HTRA2
DQX1
C15orf40
SPRY2
GTF2H2C
GTF2H2C_2
VPS36
CKAP2
CCNL1
TNPO1
UNK
H3-3B
ATG5
FANCE
POLR2J
SDF4
B3GALT6
YTHDF2
POLG
PSTPIP1
ZNF202
CRLS1
LAMP1
F2RL3
RPS6KB2
PTPRCAP
VPS37A
RB1
CNOT7
REXO1
PPP1R18
NRM
TCF12
ETFA
PTP4A2
NCKAP5L
FAM76B
EEF2
CEP57
ADAM17
PGK1
RGS16
HES1
GCHFR
MARCHF7
RMDN3
MFN2
DCSTAMP
DBI
C2orf76
PGD
ZNF277
DOCK4
SCAF1
RRAS
UGGT2
COMMD1
CCT4
ARL4A
RPS28
NDUFA7
FDX1
CHAMP1
UBOX5
FASTKD5
EXOSC10
BRIX1
RPL39L
SLC43A3
FRAT2
SACM1L
PSMD6
SMIM14
CSRNP2
TAF1B
UBE2K
SOD2
SIRT6
ANKRD24
IPP
HSPA1L
HSPA1A
TFAP2E
LSM2
SNX33
IMP3
SP7
FADS2
LRRC59
FADS1
ARIH1
RDH5
CD63
SIT1
ZNRD2
FAM89B
EHBP1L1
CAP1
ASB1
PKNOX1
ZNF554
THOC3
PNRC1
PLAG1
CHCHD7
STK38
ZNF436
DNMT1
SNUPN
CSGALNACT2
TXNDC15
NREP
C6orf226
SYNRG
SMAP1
ADORA2A
RPL10A
EFHD2
NSFL1C
PDAP1
BUD31
DNAJB2
MTRNR2L2
MSH3
DHFR
CCZ1
MIA2
DDX46
RAB1A
CNPY3
SLC16A6
SF3B2
GAL3ST3
ARL8B
STRADA
ORMDL3
GSDMB
TRMT61B
LRRC37A3
SYPL1
PURB
FOXN2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SPDYE14
SPDYE10P
COPS8
RMC1
RTN3
DSCC1
ATL3
GTF2H2
NXF1
GTF2A2
STAU2
MYL12B
MYL12A
PLEKHN1
NOC2L
KLHL17
ACOT11
CHPF2
ABCF2
GMCL1
GCFC2
CCZ1B
ANKRD36C
CISD3
CHD2
SUPT5H
RPS16
RPS15
MTRES1
AP5Z1
TAF5
RBM15B
MANF
TMEM217
TBC1D22B
CHMP7
AP4E1
FADD
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
F8
RNF141
GNA13
SLC27A3
NFU1
RIPPLY2
CYB5R4
ZC3H3
SSR3
CBR3
H2BC5
H1-4
BCKDK
SPRYD4
RNASEH2C
KAT8
KAT5
GET4
TMOD3
FZR1
DOHH
PBX2
GPSM3
FOXS1
WDR27
C6orf120
SLC38A10
MAD1L1
NUDT1
MRM2
USP32
MTF2
MTHFD1L
ZNF451
DNAJC11
CCM2
ACAD9
BIRC2
DDX19B
AARS1
MAN2C1
NBN
ARID1A
ZBTB2
POLR1F
ZNF513
WDR38
SNX17
RPL35
EIF2B4
ARPC5L
KIF23
MIB2
ARPP19
RARS2
ORC3
FAM53C
CDC25C
MSANTD2
DTNBP1
ME3
STX11
SPPL2A
RPUSD4
FLCN
FAM118B
PSMD11
SDHB
GPAT3
SYNJ1
ZNF593
CNKSR1
C1orf232
RTN4
UCKL1
WASF2
PHF19
SELENOW
AMACR
C15orf39
FAM133B
SP1
MALSU1
NELFA
C5orf51
MALT1
METTL23
JMJD6
TRMT44
PGM2
ACOX3
ZCWPW2
FAM91A1
CDIPT
AZI2
SNX1
CIAO2A
SH3BGRL3
PGLS
SETX
ANKRD13D
OST4
EMILIN1
OSBPL3
SAXO2
EFL1
MT1E
MT1M
WDR82
GLYCTK
UNC50
COA5
WDR61
MUS81
CFL1
MARCHF3
P4HB
ARHGDIA
ICE2
FANCD2
CDK11A
AURKAIP1
TIPARP
PSMD3
AMD1
WDTC1
CCDC134
ZYG11B
IFNGR1
KATNA1
MYLIP
TMEM127
CIAO1
MTHFR
CLCN6
RMDN1
CPNE3
TYROBP
NFKBID
HCST
PGS1
ANKRD36B
STMN1
UBE2Q1
CHRNB2
RLF
LATS1
UPF3A
FBXO22
ZNF414
RUNX3
UCHL5
RO60
POLR2M
TRIM13
PIKFYVE
ZBTB8OS
RBBP4
TASOR
RPN2
RNF14
MROH8
UBA52
TEKT2
ADPRS
LIG4
ABHD13
DPP8
WTAP
CASC3
CDKN1A
GABPB1
TM9SF2
CCDC107
ARHGEF39
OTULIN
CA9
KCTD5
C11orf97
NCOA3
HPD
PSMD9
PCTP
ZNF696
ZMAT3
BCKDHB
PHF6
FAM207A
FUNDC2
MARCKS
SCRT1
DGAT1
AP5S1
ARHGAP23
NME6
KLHL7
RRAGC
GTF2I
CARHSP1
GSTP1
HDAC1
ITPRIPL1
PSMG3
MUL1
IST1
WDR25
WARS1
IER3
FLOT1
CLYBL
PSPH
CCT6A
NFRKB
MAP2K5
LONP1
CATSPERD
TMEM60
PHTF2
NGRN
TGIF1
CEP112
HOXC6
HOXC5
ZNF740
CSAD
HSPE1-MOB4
HSPE1
HSPD1
USP3
TOE1
MUTYH
MIDEAS
EFCAB14
ZBTB9
KPTN
TRMT2A
RANBP1
MRPL2
KLC4
CUL7
FST
EFCAB13
ECI1
LRRC47
MLLT11
CDC42SE1
MINDY2
SNRNP200
RPP21
TMEM205
RAB3D
CCDC159
GPCPD1
OGDH
CRBN
ZBED4
CAPN15
PDIK1L
CDC42SE2
OVCA2
CCDC88B
USP4
WASL
FBXO41
EGR4
LY6G6F-LY6G6D
LY6G6F
TIMM44
ABHD16A
NAA40
IER5
UHRF2
WDR18
HDAC2
TBC1D14
MNS1
TEFM
MPC1
BTBD1
TUBGCP3
ATR
SNX19
HMGN2
BZW2
ANKMY2
MRPS15
RPL36
POLE4
MICOS13
HSD11B1L
POLR2K
FBXO43
LUC7L
FAM234A
TFRC
GGCX
CPT2
SPAG4
PSMD8
MRPL4
CHIC2
TSN
TRAPPC9
MARCHF6
SSBP4
ARMC2
ZBTB40
URGCP
UBE2D4
NOM1
HNRNPF
CYP4V2
WDR70
NUP155
ID2
LCE3B
LCE3A
NOL11
PRRC2A
AIF1
TNFRSF9
PBRM1
GNL3
CEP164
BHLHE40
MED4
LGALS1
PC
NIBAN2
KAT2B
POLR3D
INTS8
ESYT1
CDKN2AIPNL
MICU2
PPP1CC
ERMP1
WDR73
NMB
FAM111A
FAM222A
LONRF3
PIGU
PHLDA1
TMEM50A
GTF2IRD2B
SNX12
CAPRIN2
PA2G4
DGKZ
ARMC12
FKBP5
PTEN
KLLN
APMAP
GOSR2
MLEC
RNF168
AGO3
SGK1
SLC43A1
CASTOR2
CALM3
PPP5D1
MAN2B2
DIABLO
SRSF2
MFSD11
UFL1
NUDC
NR0B2
CBWD1
ZBTB45
SLC27A5
TMTC4
YKT6
DNAH7
TARDBP
POLR2J2
DOCK2
HNRNPM
CIPC
STMP1
TMED2
MON2
LRCH3
ENPP3
MED23
ANKRD36
PLXNC1
ITGB1BP1
IPPK
CPSF3
CHMP4B
ATP5MG
MIDN
UBE2Z
SLC39A5
RNF41
NABP2
MFSD4B
LRCH4
FBXO24
CTSW
MDN1
CCDC85B
FIBP
CASP8AP2