ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◣ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
POLR3F
DZANK1
IPO13
DYNC1LI2
CACTIN
FAM187A
EFTUD2
CCDC103
NME6
NUP205
MAPKAPK5
NEUROG3
PSMG2
CEP76
TAOK3
SUDS3
RPL21
NUP85
MRPS7
GGA3
VDAC2
NVL
HSPA9
DCTN1
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
RBKS
BABAM2
POLR2E
ATP5MG
C19orf48
SEC61B
ALG2
PAK1IP1
C6orf52
SMC2
EXOSC5
BCKDHA
SRD5A1
ZNF576
IRGQ
ACTR10
MRPS5
NCLN
TMED1
SLC35B1
COX7A2L
TTC8
TSN
PI4KB
NEUROG1
PNO1
FARSB
PDAP1
BUD31
LYRM4
FARS2
GOLGA5
PDE6B
ADK
AP3M1
PES1
BLCAP
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
IQCG
RPL35A
RPS23
ATP6AP1L
EIF4ENIF1
ZNF503
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
SELENOF
HS2ST1
RBBP5
CDX2
SART3
ISCU
NDUFA4
USP1
NEUROD1
ANAPC7
PSMD12
ICE1
CDCA7L
UFM1
FRG2C
PCBP1
TMEM70
ELOC
APOM
BAG6
PROSER1
NHLRC3
OSGEP
APEX1
DLL4
PAF1
MYRIP
SF3B3
COG4
ATOH1
DLX4
RABGGTB
XPNPEP3
ST13
ST18
INSM1
PTGES2
CABIN1
RPS12
PIN4
VEZT
FGD6
DUX4
ZGPAT
ARFRP1
RPS29
LRR1
FRG2
OR6B2
NDUFA10
RPS27A
CLHC1
EIF2S3
RBPJ
NFKBIL1
DDX39B
ATP6V1G2
HES1
GALNT10
BNIP3
POP5
GADD45GIP1
RBL2
RPL7
RDH10
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
DNAJB8
PCBD2
LPIN1
TRIP10
GPR108
DTNB
ID3
ZNF746
MRS2
RAB11B
HSPA1B
WDR6
ANKLE2
NEUROG2
SHB
GADD45G
MRTO4
EMC1
ANKRD1
ACOT2
PDE12
SEC11C
STK36
RNF25
PRUNE2
DAPL1
FGFRL1
ZNF664-RFLNA
ZNF664
CCDC92
CCNDBP1
PDHX
APIP
FZD8
GBX1
LEFTY2
PMAIP1
HESX1
MSX2
CCDC33
TLE2
SKIL
RYBP
NFE2
EHF
AXDND1
GTF3C4
DDX31
ARHGAP11A-SCG5
ARHGAP11A
NKIRAS1
NR1D2
APLN
SLC25A6
ZNF704
ALKBH5
TPRA1
ZNF383
SUCLG1
PLA1A
MBNL2
MSX1
FRAT2
RPN1
FOXC1
NXPH4
SPIN1
DUSP6
ZNF649
ARHGEF38
MAL
TIGD1
EIF4E2
PAX8
CDC73
MAST2
ID2
ACOT1
GABRB2
TLE3
RARA
LIG3
TVP23C
UBE2I
SPCS1
GLT8D1
CNTN4
LYPD6B
OAZ3
MRPL9
TRPM3
UPF3A
AP3D1
CCDC200
SRSF11
LRRC40
GSR
MEOX1
S100A10
CNPY2
LIN28A
RAN
RTL10
GNB1L
FOXP1
METTL24
SKOR1
LMO4
FTL
BFSP1
GC
CERKL
TPM1
MELTF
HOXB9
KDM6B
RARB
RIMS1
NEFH
RUNX1T1
BCAT2
RAD54L2
RSPO4
RBBP7
KCNK2
ANTKMT
METRN
CDX1
B3GNT4
USP17L20
USP17L22
USP17L21
USP17L12
USP17L11
KRTAP2-1
KRTAP2-2
AP1B1
CALM2
TMEM275
DMBX1
PDHB
PRSS47
NTNG2
GSX1
CYP26A1
CBX4
TBC1D8
TMPPE
GLB1
SYNJ2
COL11A2
DUSP4
SLC22A24
GATA4
LCOR
INKA2
PKDCC
MKRN2OS
MKRN2
KAT6B
RPS10-NUDT3
RPS10
UBXN11
CD52
KIF21B
HOXB1
MTCH2
BANP
ADM
APBB1IP
CLEC10A
ZNF850
USP17L18
USP17L19
PHLDB2
C15orf61
DUSP14
FBXO32
SHROOM1
CCDC174
NAGLU
DDX3X
KRT18
TNFRSF19
PCLO
OTP
HOXA3
ST6GALNAC3
COCH
KAZALD1
SERTAD2
LPCAT3
SMARCA4
BCOR
MRPL38
KMT5A
BICRA
GTF3A
SNX1
CIAO2A
RNF207
CPVL
CHN2
STRADA
FOXP2
SEC22B
GRHL2
KLF17
SNRPA
C19orf54
LYPD1
EIF4H
MLH1
EPM2AIP1
NRDE2
IRX4
OTUD7B
C16orf91
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RAB17
IGFBP6
SOAT2
SLC4A8
GALNT6
RBM26
HNRNPD
ZFP37
MEF2B
ZNF891
ZNF10
SEPTIN2
HDLBP
SMAGP
PAH
ASCL1
TCF7
MTRNR2L1
UROD
HECTD3
REC8
SCAMP4
ADAT3
PNPLA1
NCOA2
ZMIZ2
H3-3A
KMT5C
RNF32
PCDH8
CNR1
MYSM1
TMEM88B
ANKRD65
PLEKHA6
TCHP
CLDN9
SLC30A4
CLDN15
KCNJ4
TACC1
VENTX
CNPY3
JAKMIP1
WNT3
SYBU
COL23A1
SPATA25
ZNF395
NEURL2
CTSA
ATP6V0A4
DYNLT1
ZNF436
MACROH2A1
AQP7
JAK1
NR2C1
TAS2R8
TAS2R7
MACF1
RPS24
POLR3A
USP17L15
ZNF397
TMPRSS4
HOXA1
METTL11B
PCTP
JUP
BRWD1
SEMA6D
CEMP1
FAM53B
PCDHAC1
CD24
USP44
AGO1
GATA3
STX18
MARVELD3
KCNB1
KMT2A
NRG1
SH2B1
CDS1
EOMES
PEX14
DFFA
KRTAP12-1
SERPINF1
MECOM
ZCWPW1
MEPCE
RUSC2
ESRRG
STON1-GTF2A1L
CLEC4G
SNCG
MMRN2
COX5A
BEND4
OR51T1
FBXL4
SERTAD3
MAPRE1
MAPK12
SOD2
ACAT2
ANXA9
GYG2
CNN2
KCNN2
EVC
EVC2
SH3YL1
ACP1
KCNS3
P3R3URF-PIK3R3
P3R3URF
AKAP10
HINT1
NELFA
MDM2
BAMBI
PRELID3B
GJA10
ADAM17
PLXNB1
ERI1
UFSP2
C4orf47
ERRFI1
TARBP2
MAP3K12
PRKD1
RBBP8NL
YTHDF2
ZBTB25
ZBTB1
ACYP1
ZC2HC1C
ROGDI
CDC42EP3
PKIB
NANP
LIPK
PRDM10
TRAP1
ZNF248
ZNF90
CS
KDM3A
CNOT2
IGF2BP3
LIX1
CENPBD1
CTF1
BCL7C
DNAJB5
BTBD3
PFN2
MRPL34
ABHD8
MAP2K3
KDM7A
SLC40A1
METTL27
IKZF2
CLGN
CATSPERG
CDC42SE2
NFIC
ZSCAN30
KDM4C
BBS9
MINDY2
KCNQ4
TMEM54
ANKRD63
PLA2G4D
ING1
KAT6A
SS18L1
PSMA7
SGK1
PIGU
RBMS3
PTPRG
PDZRN3
CLK1
FAM162A
CCDC58
CTSZ
NTAN1
RPS3A
PXYLP1
ZDHHC17
WDR91
CPLX1
DHRS3
FAM110A
CCDC59
GATD3B
GATD3A
DONSON
PDE4D
HES7
CTBP2
ACTB
ACTR6
TMEM211
NRG2
GLI1
ZNF341
CXXC4
MDK
HES3
EIF5
ORMDL3
RGPD8
RGPD5
PEX2
BCO2
KLHL4
RAPH1
ZNF485
SBNO2
ABLIM3
SNX3
ABCC6
HSPA4L
ZBTB17
NOL4
SRSF10
ZNF827
ZBTB20
HIC2
EPS8
TSHZ1
WDR7
LAD1
PPP1R13B
RPS8
CMTR1
SYDE2
NAA40
TRIP12
FBXO36
SLC11A2
ZFAND6
RILPL1
TBX19
CLCN3
NPNT
TTC21B
IGFBP2
RHOBTB1
PDE4C
ARHGAP10
ZP4
HOXA4
LBX1
HOXA2
HOXB3
DCTN3
ARID3C
PHOX2B
TMEM120B
CCN1
LZTS1
PRRX1
TLE4
SP5
MYLK4
TMEM107
ANK2
FGF19
ARID3B
DNAJB7
LRATD2
KDM2B
CNTN1
RGS12
MALRD1
MTRNR2L2
MSH3
DHFR
DSCAML1
SMPDL3A
GRSF1
NR2F1
ARSG
KDM8
HOXB4
MEIS2
CR1L
SPATC1L
PRDM12
HOXC4
TRABD2B
ZFHX4
TBX3
HOXC5
PAX6
RASSF2
IER3
FLOT1
EVA1A
NDUFS7
NEK3
TCF7L2
FGR
IFI16
PLEKHO2
INAFM2
DBX1
CACNA1D
SH3BP2
RNF149
SULF1
CITED2
ZNF608
LYL1
VOPP1
HNRNPA2B1
CBX3
HUS1
TMEM14A
HEXIM2
PANK4
HES5
ETFBKMT
MTRNR2L8
TESC
DDA1
ARID5A
ABCG2
TLE1
RAI14
NEO1
STK38
ARHGAP24
ZFHX3
KCNAB2
JAK3
NUTM2D
SP2
PARK7
CCPG1
C15orf65
RPS6KA1
ID1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
C12orf73
SLCO4C1
PHC2
ATG16L2
HOXC6
HOXD3
NCOR2
GRHL3
SLC7A5
UBXN10
CCDC88A
SPECC1
ARHGEF10L
NADK
ERCC1
DGKZ
ENO1
PLAGL1
NBEAL2
BIN2
SKIV2L
NELFE
SIRT4
NKD1
EFHD2
OTX1
CPSF4L
TMEM104
NAT9
MTMR4
REV3L
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
MEF2C
CAMTA1
USP15
LRRN4
WNT10B
RARG
MEF2D
KMT2E
SOX21
MXI1
LNPEP
PPP1R18
RASSF5
SPG7
DENND2D
ZNF367
DIAPH3
IMPG1
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
TYRO3
ZNF414
ZDHHC1
CD38
INAVA
VAV1
HEBP2
TRERF1
BCL3
TUBB
RAC2
ATP23
PNKD
LRIG3
IQGAP2
PCNA
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
NTRK2
PKN2
PKM
CLDN2
H6PD
PPIB
PDPN
RXRA
NDFIP2
MAPKAPK3
SMARCD2
SMAD3
PLCB2
USP3
ADCY7
IFRD2
FAM120B
CEP41
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
DLG2
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
SP7
BNIP2
DYNLL1
BAIAP2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
CPT1A
KCTD6
DTX4
AKIRIN1
IL6R
PRSS56
KIF26A
TTI2
ATXN1L
SLC35E2A
CYTH4
TPST2
MYEOV
FOS
PTGES3
LRGUK
ZFX
HAND1
HOXB5
HNF1A
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
HHIP
PCDH11Y
FAF2
C12orf29
ZNF3
ARHGEF1
ADGRL2
UPP1
CASC3
DMRT3
CD164
CTTN
SLC39A13
SLAMF8
TYROBP
ANKRD13D
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
CDC42EP2
SLC10A2
CLTC
SEMA4D
PIP4P2
ARHGAP45
MAP2K1
VANGL2
MAD1L1
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
ERLIN2
PEAK3
THRAP3
WDR59
MRPS31
GFRA3
NOTCH2NLC
MIDN
PDE1B
MAP1S
KRI1
CDKN2D
TTYH1
EPM2A
MYO10
RAD50
PIKFYVE
PKNOX1
SDE2
ARL4A
BHLHE40