ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025676 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◣ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
PEMT
DUX4
MTRNR2L2
MSH3
DHFR
PMF1-BGLAP
PMF1
MTRNR2L8
NME1-NME2
NME1
BAX
KIF5C
NME2
CCDC86
MLLT1
SLC35E2A
NOC4L
DDX51
SLC35E2B
TRIAP1
COX6A1
ZNF485
SNRPD1
FAM98A
COLEC11
SSNA1
ANAPC2
SNX25
CFAP97
AKAP10
PHF7
BAP1
DRG2
RGPD2
RGPD1
MRPL55
DDX42
CCDC47
ZNF296
GEMIN7
P3H4
FKBP10
GTF3C4
DDX31
TBL1XR1
GPS2
EIF5A
FAF1
CDKN2C
TMEM248
SRSF1
DHX33
MARVELD1
PCBP1
IARS1
ZFP36L2
TENT4A
NPM1
MTHFD1L
THOP1
SGTA
CWC25
YBX2
UBE2K
LSM12
G6PC3
SNRPE
RAN
AP5S1
TET3
DUS2
DPEP2NB
DDX28
RAD50
NOC3L
RBM42
ZNF639
EIF3B
HMGA1
CLUAP1
C16orf90
MED9
MRPL3
SLC25A10
MRPL12
SLC5A6
CAD
ATRAID
RPLP0
GCN1
SELENOO
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
IGF2BP3
KCNQ5
SYNCRIP
COPS3
PIGL
NCOR1
MDN1
NCBP2AS2
NCBP2
ZSWIM7
TTC19
MAPKAPK5
SPRED1
CLCN7
EBNA1BP2
CFAP57
NOP16
HIGD2A
PTDSS2
ANO9
TMEM167B
ICE2
UTP4
DERPC
CHTF8
SMYD2
UBFD1
EARS2
SNF8
CENPV
DR1
UNKL
C16orf91
MAST2
ABT1
LARP1
DPH5
PDCD11
ATP5MD
USP22
USP32
RBM18
MRRF
PRR22
DUS3L
ETF1
HNRNPF
GET4
ARSG
PARP1
FRA10AC1
TNRC18
LOC100129484
ZBTB44
SYT5
KMT5B
CNBP
MAP2K3
EEF2K
RCC2
POGK
MEF2D
ADORA2B
PWP1
NUDT1
MRM2
RNF166
CTU2
PBX2
GPSM3
PMS2
AIMP2
KLF16
SECISBP2
CKS2
THNSL1
VMO1
PSMB6
GLTPD2
CBWD5
CBWD3
PDS5A
FNTA
TBRG4
COA8
BAG5
CMSS1
SCAND1
NR1D1
SNX9
RRM1
CTU1
RPL18A
PLD6
PBRM1
GNL3
LONP1
CATSPERD
CELSR3
LRP6
RTN3
ATL3
EPRS1
XPO5
POLH
TAF5
OSGIN1
WDR4
PPRC1
GTF2H3
EIF2B1
NUGGC
ELP3
RPL10A
NUP50
PRKAR1B
TRAP1
SAMM50
ADPGK
HAX1
DNAAF4
CUTC
COX15
IPO11
DIMT1
EIF4H
TOMM34
STK4
EIF4B
YARS1
S100PBP
RRP1B
HSF2BP
ASAP1
HNRNPL
LRRC58
GLRX2
PFAS
NCOA5
MRPS17
CLINT1
P2RX2
LRCOL1
HTATSF1
BRS3
COX10
TMEM38A
SMIM7
SLCO4A1
TRMU
WDR3
GDAP2
CFAP251
GATAD2A
SP3
DCP1A
MTG1
FZR1
DOHH
TRIM16L
PKN2
UTP18
MBTD1
SPRTN
EXOC8
PHF12
SRSF10
DNAJA3
CORO7-PAM16
CORO7
N6AMT1
ANKRD26
RAB35
NBEAL2
CCDC12
ADI1
SUGP2
ARMC6
PGP
MLST8
BRICD5
SMARCA4
VDAC3
LUC7L2
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
BANP
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
PDRG1
FAM220A
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
PRMT2
CXorf38
RAD21
ACTN4
BNIP3
FAM122A
VPS26B
NCAPD3
SNAP47
JMJD4
HINT1
ZC3H8
SYNGR4
SAYSD1
CENPBD1
MCRS1
TOLLIP
NBPF1
NPRL3
SAMHD1
ATP6V0E2
FAM200B
ITPA
DDRGK1
PPP6R1
EID2B
EID2
MAP2K2
ZBTB17
GTF3A
RPP38
ACBD7
RANBP3
PTPN4
EHMT1
ABCF3
DAGLB
THAP7
RABIF
TMEM250
INTS13
FGFR1OP2
FAM24B
UAP1L1
MAN1B1
RAX2
MRPL54
APBA3
C1orf74
CHMP7
SPPL2B
LSM7
LAMP1
MTHFSD
CBX5
MYPOP
ZNF12
WIPI2
HNRNPH1
USP21
HNRNPA1
FAM71E1
EMC10
FMC1-LUC7L2
FMC1
ABCA3
MRPS18C
HELQ
PRR30
PREB
PPOX
RAB18
TK2
CKLF-CMTM1
CKLF
MIS18A
NDEL1
NAGK
TMED4
DDX56
IFNAR1
SMIM11B
SMIM11A
NANP
XRCC2
SH3YL1
ACP1
HASPIN
ALKBH5
MOK
RRP1
SLC2A11
CRTC1
AKAP1
PITPNB
TMEM209
SSMEM1
SUMF2
PATL1
LOC100287896
LIPT2
KDM8
C19orf81
RCBTB2
MAP2K7
UFC1
PBLD
HNRNPH3
CBY3
PPP2R3B
TRIM37
FADD
PPP1CB
PPP2CA
CDC7
RPL36
MICOS13
HSD11B1L
YEATS4
DENR
WWP2
NOB1
SLX4
SELENOI
ADGRF3
ERCC6L2
SOD2
NELFCD
DCAF8
PTK2
SPDL1
SLC39A7
RXRB
RING1
HSD17B8
MRPL45
SPDYE6
LOC100289561
CCNT2
TMEM141
CCDC183
SUPT5H
RPS16
CACYBP
SLC25A11
RNF167
PFN1
STYXL1
ZNF576
IRGQ
CDC5L
SKA3
MRPL57
SAFB
SAFB2
COL11A2
CDC20
GP1BA
THAP11
RPS2
RNF151
OARD1
NFYA
GPI
CHD1
SS18L2
SEC22C
FXYD3
MTCH2
PUF60
OPA1
RBM17
STXBP4
COX11
TXNL1
MRPL24
HDGF
SRCAP
LOC730183
TBL3
FUT8
ZZZ3
SMG9
TIPIN
VPS13A
MAD1L1
NUP107
SNRNP70
BTBD10
MARCHF7
ZNF583
FAM120B
COPB2
ASNSD1
ASDURF
AMZ2
MRFAP1L1
BLOC1S4
RPS19
UNG
ALKBH2
C6orf89
TAS1R1
NOL9
NOP14
GRK4
RSRP1
TRMT61B
HP1BP3
CCT5
ATPSCKMT
COQ9
CIAPIN1
RPS11
RPL13A
TRMO
DYNC2I1
RTL10
GNB1L
RALGAPB
EIF2D
OSCAR
NDUFA3
RPL12
LRSAM1
GRB2
CALR
TOMM20
TUBGCP5
SLC15A4
RAD23A
COASY
TMEM79
SMG5
MSL2
DPF2
GMCL1
LRFN3
NCAPG
ECHS1
MAGOHB
POLR2J3
ARF3
QRICH1
UHRF2
SRRM1
PARK7
TOR1AIP2
TOR1AIP1
TBC1D5
MPC2
DCAF6
TDP2
ACOT13
TMEM18
POP7
MLX
TAOK1
XPC
LSM3
MAP3K7CL
CCT8
C5orf24
NAA35
GPAM
CCNQ
SPOP
THAP5
DNAJB9
PPP4R3B
TAX1BP3
EMC6
RPS7
WDR73
NMB
GDF5
CEP250
ZNF48
ANKFY1
SARS1
DHDDS
RPS6
MAP1LC3B
FBXO31
ASXL1
EEF1AKMT1
CCNC
ACAT2
INTS7
DTL
TMCO1
HSD17B1
CRB1
CAPZA2
NUP214
RPL17-C18orf32
RPL17
C18orf32
THOC3
PRDX1
ZFP91
LPXN
SMIM14
NCOA4
SPDYE7P
POM121
RFC5
TMEM139
CASP2
SH3GL1
CHAF1A
COP1
SCAMP5
GPBP1
ERGIC2
MED1
CDK12
ZBTB2
PPME1
C2CD3
AKAP11
MAK16
PURA
NAPG
TOPORS
SMIM27
AP3B1
JOSD2
ASPDH
HAUS5
RBAK-RBAKDN
RBAK
RPS28
NDUFA7
ZNF286A
GPATCH3
CAND1
TTC32
NOL11
TRIP6
SRRT
NAA38
GID8
DIDO1
KAZALD1
DNAJC27
ZNF771
PRR14
FBRS
AURKAIP1
NOXO1
FSIP1
RPL27A
ARFGAP3
SMIM10L1
PRH1-TAS2R14
DYRK1B
CCDC106
MRS2
TMEM88
CYB5D1
HSPA4
UBR3
METTL5
CFAP70
GAS8
DBNDD1
SLC26A8
MAPK14
DBR1
ATF2
U2AF2
C6orf136
SNX5
MGME1
USP10
CDC34
WDR13
SHBG
FXR2
STS
PUDP
FAM135A
XPO7
DOK2
TTC23
LRRC28
PAPSS1
PDXDC1
RNF149
SMARCC1
UBE2M
CHMP2A
VMAC
NDUFA11
DARS1
IPMK
CISD1
NKTR
TIGD1
SPEGNB
GMPPA
EIF4E2
PSMD5
EHD1
AHCTF1
LTV1
ETFA
NDUFA8
MORN5
MRM3
GLOD4
IREB2
HSF1
BOP1
EPS15L1
TMEM70
ELOC
C8orf48
CEP350
SRD5A1
UBE2D3
MMS22L
ZMYM4
ICMT
HES3
MATR3
EIF5
USO1
MINK1
ZNF664-RFLNA
ZNF664
CCDC92
WDR18
STRIP1
PRELID3B
RAB33B
ESRRA
CATSPERZ
PALB2
DCTN5
TMEM104
NAT9
ARPC2
ZNF638
ATXN7L2
SIRT5
UROS
BCCIP
MYL5
ATP5ME
FASTKD2
ELOVL1
EIF4A3
CC2D1A
C19orf57
PSMB2
SYS1
PEX12
AP2B1
SUGP1
MAU2
HINFP
HERC1
SHPRH
RBM15
ATAD3A
POLDIP3
TFB2M
CNST
SCAF11
MAP3K7
KIFAP3
RSL1D1
EFHC1
DUSP15
TMEM63B
MRPL14
KIAA1191
ARL10
CYCS
SURF2
SURF1
RPL7A
MED22
TMEM109
PRPF19
KCNN1
TIA1
PCYOX1
TIGD6
HMGXB3
SEC62
HSBP1
SLC25A4
SEPTIN7
RPS15
MKNK2
RCC1
TMEM63A
LEFTY1
GZF1
CSDE1
MORF4L1
VMP1
PTRH2
TMEM43
CHCHD4
FAM76A
CNP
PRDM4
ZNF34
RPL8
GATD3B
GATD3A
CUL3
ZBTB45
MAPKAP1
ZCCHC14
NUF2
WRNIP1
MYLK4
MBTPS1
NFYC
AURKB
CCDC93
MRPS7
MIF4GD
GGA3
LANCL2
WDR43
DHX37
BRI3BP
DSN1
DLGAP4
MICOS10-NBL1
MICOS10
AASDH
ZBTB6
RC3H2
DFFB
CEP104
NBPF3
NUDCD2
HMMR
EID1
ZNF346
KIF5A
DCTN2
POLR2J
C15orf40
ZNF517
SF1
ALG8
ING1
CARS2
RFX1
ADAT1
PXMP2
POLE
GABARAP
MRNIP
THAP1
HBS1L
GLCE
BORCS6
CIAO3
TMED9
IKZF5
B4GALT7
ACADSB
GOLGA1
PRKDC
MCM4
PUM2
SPDYE16
POLR2J2
SMG7
NUP153
CD2AP
SPAG16
FIP1L1
KIN
ATP5F1C
TMX1
SRP19
SLC12A2
B9D1
SBNO1
AP2S1
WDR27
C6orf120
PIAS4
KCNJ14
GRWD1
WWOX
RPS29
ARHGAP35
TFAP2A
PPM1G
MRPL21
IGHMBP2
CPLANE2
RBPJ
PTBP1
PPAN-P2RY11
PPAN
ANGPTL6
ATF7-NPFF
ATF7
APTX
ENDOV
TSEN2
MBD1
CXXC1
ZNF317
PHF23
DVL2
USP54
MRTFB
RBM26
HSPH1
THADA
LINS1
ASB7
YIPF3
POLR1C
LRRC73
UCN2
PFKFB4
TLX2
PCGF1
LBX2
UIMC1
MIDN
CBARP
ATP5F1D
CHUK
DNTTIP2
CCDC77
CLPTM1L
ZBTB14
TGOLN2
TRAPPC2
OFD1
UBALD1
RPRD2
RNPC3
C8orf37
MICU2
ZFC3H1
THAP2
CD320
UPF1
NSUN3
DHFR2
WDR77
ATP5PB
GOLGA8B
CFAP410
NRBF2
TSACC
CCT3
CAPN7
NAPB
CCNT1
TMEM127
CIAO1
WWP1
DNMT1
SIPA1L1
EXOSC10
SRSF11
POLR2E
GPX4
POFUT2
RNF32
AMACR
ZNF248
KIF22
NAT10
MTHFD1
MFSD8
ANKRD13C
ABHD18
ASH2L
ZKSCAN2
SMARCA5
TSSC4
E4F1
ARF4
CST6
RAD23B
C11orf80