ChIP-Atlas: Target genes

Potential target genes for PRPF4

Query protein: PRPF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708080 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
PRPF4's Target genes

◢ PRPF4: Average

◢ SRX4708032: Hep G2

◣ SRX4708080: K-562

◢ PRPF4: STRING

H4C9
H2BC12
H2AC12
B4GALNT3
H2BC11
H2AC11
H4C12
H4C11
H2BC14
H2AC14
PRDX1
H2BC15
H2AC15
SPATA33
H2BC17
H2AC17
H3C12
H2AC4
H4C2
H3C2
EEF1A1
H2BC21
H2AC21
H2AC20
SRSF6
ZFAND6
H2BC5
H1-4
HERPUD1
EIF1
H4C5
H3C4
H2BC7
H2AC7
H4C4
FUS
RCOR3
TXNL1
SRSF7
ATF4
SRSF2
MFSD11
METTL23
JMJD6
TESMIN
UBC
HMBS
H2AX
DPAGT1
H1-2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ACTB
FAM53C
CDC25C
UBE2S
NXF1
UNK
H3-3B
RAD23B
DDX3X
OAZ1
C19orf48
MTHFD2
BRD2
DDX19B
AARS1
BBC3
RPLP0
GCN1
BRWD1
MAT2A
MDM4
SLC35B2
HSP90AB1
ADARB1
TEDDM1
GLUL
H3C13
H2BC18
FAM174C
CIRBP
SCGB1C2
PPIA
RPS12
RAD23A
FARSA
CALR
RPSA
SCGB1C1
ODF3
POLG2
DDX5
NAA38
CHD3
H3C6
H2BC8
H2AC8
HSPA5
TBL3
RPS2
RPL3L
RNF151
NDUFB10
FOSL1
CCDC85B
NPM1
MCL1
STX10
IER2
PMF1-BGLAP
PMF1
NXPH3
TRA2B
TMEM167B
RPL3
HNRNPA3
P4HA1
RPS20
SESN2
TUBB4B
STPG3
FAM166A
HSPA1B
RPLP1
GTF2IRD2B
IER5
ATF3
TUBA1B
HNRNPH1
SRSF10
FTL
RRM2
TSPOAP1
CTNNB1
KIF5C
HNRNPAB
H3C10
H2BC13
H2AC13
HSPA9
SKP1
H2BC4
H2AC6
HSP90AA1
DNAJA1
APTX
H2BU1
H2AW
MPDU1
LOC100996842
EIF4A1
CD68
RPS3
CYCS
TSEN34
OGA
CCNL1
DUSP1
E2F3
ASNS
GTF2IRD2
UBR5
DDIT4
SCAF8
HNRNPA2B1
CBX3
RPS23
ATP6AP1L
TOB1
NASP
MARCHF7
SCARB1
EGR1
UQCC3
LBHD1
CSKMT
C11orf98
TRIB3
JUNB
FTH1
MPC2
DCAF6
JPT1
TFRC
EIF3J
C6orf62
CHAC1
TAF1D
NUP214
C11orf54
CCDC116
RHEB
NRF1
MTA3
UBE2L3
TUBA1C
ZNF467
HMGA1
STMP1
CALM2
GARS1
CSRNP2
MORF4L1
FBXL20
MTRNR2L8
FOS
MATR3
SRRM2
PTPN6
C12orf57
EIF4A2
TAF15
NCL
RPL12
LRSAM1
SLC3A2
ENO1
MYLIP
SUPT5H
RPS16
TOP3B
TRMT2A
RANBP1
H3-2
RPL13
ARL6IP1
ZBTB2
CEBPB
POLR2J3
H4C13
H3C11
H2AC16
H1-5
KLF6
MRPL40
HIRA
PGS1
PRAME
MTRNR2L2
MSH3
DHFR
SLC16A1
ODC1
DDX21
LZTR1
LDHA
NUCKS1
SLC1A5
NOXO1
SFPQ
KPNA2
ZNF143
NFYC
FAM83D
SLC20A1
HMGN2
RPL10A
RCC1
BZW2
ANKMY2
FSCN1
PIP4P2
TMSB4X
SUB1
PRKAG1
BAIAP2
SETD5
PCK2
NRL
LRRC25
GDF15
MTRNR2L9
RPS8
BCLAF1
KMT2E
PABPC1
MYNN
ACTRT3
HNRNPDL
ENOPH1
H4C3
H1-6
SLC38A2
HBP1
EHD1
SECISBP2
CKS2
AFF1
CD55
NDUFS7
PCBP2
MUS81
CFL1
NABP1
NFE2L2
GPS2
EIF5A
XPOT
RPL36
MICOS13
HSD11B1L
TSEN15
SOD1
DR1
RPL5
DDX59
ENOSF1
TLCD1
SLC39A10
RPL23A
RAB34
PROCA1
NEK8
ZBTB4
SLC35G6
POLR2A
NOP14
GRK4
UBE2D3
DGCR8
RPS3A
OVOL1
AP5B1
CSDE1
GATAD2B
WASL
CSE1L
SRSF5
WDR4
TAF9
RAD17
AK6
CITED2
FRG2
GAPDH
BCR
PCBP1
MRPS18B
ATAT1
BAG3
EEF2
ZFP36
PLEKHG2
STMN1
PARP16
MYO1G
ZC3H11A
ZBED6
VCL
MED15
H2AZ1
DNAJB14
SRSF3
ANGEL1
RPS11
RPL13A
DUX4
YBX1
UAP1
TMEM267
LRPPRC
GTF2A1
YWHAG
RPL35
ARPC5L
WDR38
NUFIP2
DYNC2I1
ZC3H4
AMD1
MEMO1
NOC4L
DDX51
KDM3B
H1-10
PTP4A2
HMGB2
TUBB2A
GORASP2
MPP5
ARL15
MYL12A
PAFAH1B2
DMTF1
BCL2L13
ATP6V1E1
CCT8L2
RPS5
RNF225
C12orf65
RFWD3
ACTR3
PHF13
RPLP2
PNPLA2
PIDD1
HSPA6
SPDYC
RMI1
HNRNPK
ZNF517
ZNF34
TMPO
RPL8
MXD1
GHITM
GADD45A
CANX
SF1
ZNF740
CSAD
RSAD1
CHAD
PEX5
TXNRD2
COMT
NBEAL2
CDK11A
CCDC12
RPL18A
TNFSF9
GTPBP4
PPIF
CASKIN1
LUC7L2
ZCWPW1
PPP1R35
MEPCE
DNAJB1
ATF1
PBLD
HNRNPH3
TBRG4
FKBP5
ARMC12
PSMG2
RPL15
NKIRAS1
CEP76
KCNK5
CTSC
CDK11B
EAPP
VAPA
TAF12
YTHDF2
SNAP29
PI4KA
TBL1XR1
SRSF1
SDCBP
HSPA8
HNRNPD
WDR25
WARS1
SREK1
NCOA7
CBX4
ZBTB45
TRIM28
LRCH4
FBXO24
WDR1
MCM7
AP4M1
CYP2W1
EIF5
EIF4G2
SERTAD3
POLR2J2
ILF3
MAP1LC3B
FBXO31
XBP1
TOB2
CLPB
H2BS1
MAPK1IP1L
UBR4
LSM8
RPS13
SMAD5
TRIM25
TENT5C
RRP1
NOTCH2NLC
PSAT1
ICE2
ZNF358
MCOLN1
TTYH2
TPT1
TIGD5
RPL38
EEF1D
GTF2H2
GTF2H2C_2
DNAJB12
THUMPD3
ANO10
ABHD5
STT3B
RPL17-C18orf32
RPL17
C18orf32
NUP62
IL4I1
DNAJB4
ATF5
RBMXL1
PTP4A1
KYAT3
TBC1D22A
POLR2J
C6orf47
BAG6
APOM
HNRNPL
FAM3C
FHL2
TAF4B
IARS1
EIF2S2
TPI1
TMEM41A
SPSB2
ETF1
SERPINB9
ANKLE2
ID1
USP42
GTF2I
SIRT4
POLR3D
ID2
SALL2
YARS1
S100PBP
IPO7
PPP1CC
FLYWCH1
CRKL
MADD
PPP4R2
EFCAB2
SLC35E2A
EIF4E
CALM1
SNRPG
FAM136A
MORC3
SDF2L1
RBM12
CPNE1
SPHK2
RPL18
FAM83E
ANP32B
PTMA
HNRNPR
EIF2D
HIC2
TMEM68
TGS1
PHF19
PCF11
LMNB1
AHCTF1
UCHL5
TP53BP2
RO60
CENPC
YWHAZ
LONP1
CATSPERD
NFE2
ZNF274
H3-3A
FLOT2
DHX9
DHRS13
NFIC
TARDBP
VARS2
GTF2H4
COIL
NRDC
ZC3H6
TRIM27
CDC42
TYMSOS
TYMS
SLC35E2B
MARS1
ARHGAP9
PSMG1
VPS52
RPS18
B3GALT4
DHX15
MRTO4
EMC1
GTF2H2C
VEGFA
SH2B3
STYXL1
LANCL2
UBA52
TCTE3
ERMARD
TRAF7
RAB26
USP14
RPL32
RNPS1
LRRC37A3
ZNF76
UIMC1
SMC1A
RIBC1
PNP
PIP4P1
IFRD1
RPL19
CACNB1
ASH2L
TRIAP1
CZIB
COX6A1
THAP7
FBXO5
THAP5
DNAJB9
SSNA1
SLC25A3
ANAPC2
HNRNPU
NIBAN1
C5orf24
ACBD6
SSU72
MKRN2OS
MKRN2
ZFAND5
FNTA
ZNF398
ZNF425
RPL14
EIF4B
HEXIM2
H4C1
H3C1
H1-1
ZNF367
CRCP
CAPRIN1
ZCCHC7
PCIF1
MRPL35
IMMT
BRD3OS
ADK
TNPO1
SRD5A1
SERBP1
REPS1
HINT1
FBXO4
ZBTB40
MTRNR2L1
ZNF3
PCDH1
COPS6
BAZ2A
ATP5F1B
ATAD2
PSMD5
NUP153
BAZ1B
TPR
SUPT3H
ODR4
MKNK2
FMC1-LUC7L2
FMC1
DEDD
TRMT1
TMEM187
NR4A2
NACC1
LSM14A
HCFC1
THAP11
NUTF2
CENPT
NCOA3
MICOS10-NBL1
MICOS10
IBA57
SLC25A6
RFX3
TMEM60
PHTF2
NDUFAF3
IMPDH2
HNRNPF
DALRD3
CYP51A1
SFT2D3
PMAIP1
CCNI
TMEM238
TMEM190
SLC25A5
RPL28
TRIM24
NMNAT1
LZIC
BCAT1
RTN4
IQSEC3
MAPK1
GART
CAMTA1
CREM
SRARP
HSPB7
CLCNKA
PRPF40A
HSP90B1
F2RL3
ESYT2
ARL6IP6
ERBIN
ZNF124
RPS14
PTPRH
PUM2
ZNF621
CARS1
RUNX1
RCC2
PRRC2A
PAIP2
LTN1
EVA1B
AIF1
USP47
LSR
SRCAP
RPL11
LOC730183
GMPS
DEK
MID1IP1
CCPG1
C15orf65
GTF2B
SRSF11
SLC25A1
RPL22
RNF207
NOTCH2
LRRC59
AK2
SREBF1
NQO1
MRPL48
AZIN1
POLDIP3
GLS
LTA4H
PDIA3
DRAP1
DDX50
C11orf68
PNRC2
PIGW
MYO19
GGNBP2
ZNF655
TMSB10
JADE1
GTF2H3
FAM200A
EIF2B1
SNRPD1
SPATC1L
SLC7A1
RPS28
PPP4C
NDUFA7
MYC
ING1
H4C7
H4C6
H3C7
H2BC9
CARS2
ALDOA
RPL10
ANP32A
UBAP2
MAN2C1
FAM133B
UTS2B
CCDC50
ZNF786
KATNA1
FOSB
DDX17
SERP1
H4C8
EIF2A
CD164
ZNF460
NBN
KMT2C
MRPS14
SND1
ZWILCH
SNAPC5
RPS10-NUDT3
RPS10
RPL4
HMGCS1
C16orf72
MPZL1
NANS
CCT2
ZNF24
PSMD12
OXSM
NGLY1
HYOU1
HOXB9
BTG3
VDAC2
ZNF787
GOLPH3
CLCC1
FAM8A1
SLC25A4
SEC63
CNBP
PPP1R14B
PLCB3
LOC114841035
FKBP2
SARAF
BRAF
BACH1
ANKRD17
TUBB
DARS1
SDHAF2
MDC1
CPSF7
PTPN9
RNF11
NOTCH2NLA
IER5L
ETV2
COX6B1
THRAP3
EIF1B
UBXN8
FUCA2
LRIF1
DYNLL2
DDX39A
ANXA2
SEPHS2
KIF21A
STARD7
CLIC4
RHBDD3
EWSR1
VILL
DDAH1
CCN1
ATP2A2
IGF2BP3
BHLHE40
SVBP
SNX5
SCRT1
MGME1
GABPA
ERMAP
DGAT1
DCAF10
CCDC71L
ATP5PF
RAB12
UBA2
TOMM6
PRICKLE4
PPP6R3
OTUD4
NADK2
GDI2
FRS3
ARID1A
TSPAN31
MARCHF9
CDK4
AGAP2
SNRPB
BCORL1
TMEM79
SMG5
SNAI1
PRMT1
RBM25
PABPC4
ATXN2L
TXLNA
CSRNP1
SMARCC1
PLEKHH3
DYRK1A
CNTNAP1
CCR10
ADNP
ZNF487
TMEM39B
STIP1
SGK1
ARHGAP35
AP2S1
ADGRL1
SINHCAF
PHF3
FAM222A
SNX1
CIAO2A
RPS15A
PSMA5
CAMLG
RBM17
ZBED6CL
RBM3
LRRC61
EIF4G1
ACTR3C
ACTR3B
TEAD2
DKKL1
SBNO1
PPIL2
CABLES2
SP3
MTHFS
CTCF
SERPINB1
SDE2
NUP133
HSPB1
FAM76B
EZH2
CEP57
IGF2BP1
SLC39A7
RXRB
RING1
PPP1R15A
PLEKHA4
NOP58
KANSL1
HSD17B8
GSK3B
GMEB2
COL11A2
UNKL
DPY19L4
VMAC
NDUFA11
TMEM106B
RPL22L1
WTAP
TADA3
SOD2
PRDM15
MTHFD1L
IPO11
H2BC6
EIF4H
DIPK2A
DIMT1
ARPC4-TTLL3
ARPC4
ZNF518A
TM2D3
LATS1