ChIP-Atlas: Target genes

Potential target genes for XRCC4

Query protein: XRCC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4192136 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
XRCC4's Target genes

◢ XRCC4: Average

◢ SRX150504: K-562

◢ SRX4192131: MCF 10A

◢ SRX4192132: MCF 10A

◣ SRX4192136: MCF 10A

◢ SRX4192137: MCF 10A

◢ ERX177102: U2OS

◢ ERX177103: U2OS

◢ XRCC4: STRING

RBM42
TBL3
RGPD2
RGPD1
TRMT61B
TMEM208
LRRC29
TRIAP1
CWC25
TRMT44
ACOX3
MTRNR2L8
MTRNR2L2
RPS6KB2
PRKRIP1
GPAM
OXNAD1
DPH3
SSNA1
ANAPC2
TFPT
PRPF31
RLF
NOC4L
DDX51
GTF2H3
EIF2B1
MRPL55
PFAS
TSN
MRPL4
FAM149B1
ECD
ATRIP
ADPGK
TBRG4
NUP153
POLR3F
DZANK1
SLC35E1
IPO11
CCDC86
NFX1
RMDN3
CWF19L1
C1D
SRRD
HPS4
SSU72
MRM3
GLOD4
PWP1
CMTR1
NUP214
RAD18
PINX1
C7orf50
SPTLC1
MRPL2
KLC4
POMZP3
MAPKAPK5
FBXW7
ADAR
CLPTM1L
CHMP1B
RPL6
PTPN11
MAGOHB
RRM1
AASDH
SUPV3L1
DUS2
DDX28
LANCL2
NOP9
DHRS1
MAGOH
RPL8
KPTN
TCTE3
ERMARD
RNF139
THUMPD1
ORMDL3
TRUB1
WDR4
DNAJB12
WDR74
FDXR
PPIL4
MIA3
PELP1
RNF166
CTU2
SPHK2
RPL18
NPHP1
NCBP2AS2
NCBP2
SNRPC
ACAD9
PPP2R3B
SF3B5
RNPS1
ZNF721
PIGG
ZC3H3
C16orf91
NAF1
NDC80
METTL4
HAUS5
CENPW
ZFAND2A
PURB
CCNA2
OAZ3
MRPL9
SLC35F5
CYP46A1
POLR1F
PLAA
IFT74
CTDP1
RRP1
FANCD2
MED9
ATXN1L
UBR4
NUP155
ZFPL1
CDCA5
RPS8
SLC25A16
SRPRA
BDP1
QTRT2
CCDC191
MTRNR2L9
AP2B1
XAB2
BCL2L2-PABPN1
BCL2L2
RANBP6
THAP4
ATG4B
SRSF11
LRRC40
COPS8
SETD3
CCNK
DNAJC30
BUD23
TMEM237
EFTUD2
CCDC103
VPS37A
CNOT7
MTHFSD
PUM3
UBQLN1
CCDC59
WDR53
FBXO45
C2orf49
RABL3
GTF2E1
RRP1B
HSF2BP
SAP30BP
RECQL5
FAM122A
THOC1
GHITM
EXOSC9
SECISBP2
PEX10
CCDC124
IDH3B
GTPBP10
PHF7
BAP1
ZNF26
RPLP2
MAP3K7
NDUFA10
TUBGCP6
SPACA9
AK8
ABCF2
CFAP410
CDK11A
STX18
BRMS1
AP5S1
CDK11B
RECQL4
LRRC14
RPL23
GAN
COMMD1
CCT4
N4BP1
EDF1
KIAA1109
AOPEP
RPL9
LIAS
MFN2
DHDDS
MED20
BYSL
RNH1
TRMT5
SLC38A6
EFCAB2
PGBD4
EMC7
C8orf33
NOLC1
RPUSD2
CENPBD1
WDR61
TMEM183A
BRCA1
BOD1
NRAS
CACTIN
TAF11
PSMB2
PAK1IP1
C6orf52
WFDC3
DNTTIP1
PSME3
SDE2
CDADC1
UBAP2
RANBP2
SMPD4
MZT2B
ZNF614
ANAPC10
ABCE1
NOL10
PROSER1
NHLRC3
MED6
AP1G1
NUP133
MFSD14C
FAU
RPIA
TBCK
AIMP1
NUFIP1
GPALPP1
PIGU
PEF1
NDUFV1
MECR
PRMT3
NAT10
BET1
SENP5
MORF4L1
NELFA
MIB2
LDAH
MED27
HBS1L
TTLL5
ERG28
NUP42
PISD
ZNF805
TTC1
TMEM147
DDX49
COPE
WDR75
VPS4B
WASHC5
NSMCE2
ARHGEF7
TBC1D22A
SKIV2L
NELFE
TMEM203
NDOR1
SPRYD4
S100A6
WDHD1
SOCS4
SLC9B1
VCPKMT
ATP9B
CXorf56
MMUT
CENPQ
USP14
KIF15
KIAA1143
CNOT1
TIMM13
POLR2K
RNF141
IFT172
COQ7
ZC3H13
ATG16L1
ANKRD17
CBWD5
CBWD3
ZNRD2
TMEM71
PHF20L1
SNAPC5
BLOC1S5
MDN1
USP42
TUFM
SH2B1
SLC35B1
UBE4A
CHMP4A
ZNF304
GPKOW
CHMP4B
TOMM6
CCDC113
NDUFB6
APTX
STK19
DXO
RNASEH1
TBCCD1
DNAJB11
MUL1
XPNPEP3
ST13
HDAC6
USP8
ZC3H18
SERP1
EIF2A
ATAD3A
FBXW9
VAMP3
PPWD1
CENPK
TPR
ODR4
GUF1
MZT2A
CBWD2
UTP15
ANKRA2
KDM5A
CCDC77
OGDH
EMC4
ZGRF1
LARP7
MFSD14B
RTF2
XRN1
PKN2
TTI1
RPRD1B
DCAF1
USP20
C9orf78
U2AF1L5
U2AF1
FAM156B
FAM156A
ATG5
ZNF79
NBR1
RPL24
EIF2S2
DHX40
SLC35A4
APBB3
ING4
ZNF576
IRGQ
ATAD3B
SCFD2
RFC1
SLC25A53
CAAP1
ZNF133
ABT1
MRPS17
ZNF263
CBWD6
LRRC57
HAUS2
GTF3C2
KLHDC4
PPIG
DDX19A
COX18
PPP4R3A
NGDN
RFT1
ZNF268
RPS2
IQCC
ZNF830
CCT6B
GTF3C4
DDX31
ATG7
PPAN-P2RY11
PPAN
POLA1
ZCRB1
PPHLN1
GNAS
ICE1
NIPA2
DARS2
CENPL
GUK1
PHF5A
ACO2
LONP1
CATSPERD
ZNF2
DUS4L-BCAP29
DUS4L
COG5
KLHL7
FAF1
ALS2
SMU1
OSBPL8
DNTTIP2
SELENOK
UCHL5
RO60
FDXACB1
C11orf1
FAHD2A
C12orf73
ANKS1A
GPR89A
GAR1
MTRNR2L10
METTL1
EEF1AKMT3
RPN1
SCAF11
MAP3K13
FBXL18
ERLIN2
TBP
PSMB1
TMEM9B
TMEM230
ZNF653
ERCC5
FBXW2
ZFYVE28
TPT1
CFAP99
KLHL12
OTUD6B
NHP2
CLN5
GPSM3
EEF1AKNMT
ELP5
CTDNEP1
ZDHHC3
EXOSC7
LAMTOR5
TRMT10C
PRC1
METTL14
FCF1
AREL1
RTRAF
RBM18
MRRF
NRDC
NXF1
ZNF181
SEC13
ZNF460
PSKH1
RBM22
ELOC
STK16
GLB1L
CBWD1
TAF9
RAD17
AK6
NCAPH2
LMF2
CACYBP
TPP2
RBM15B
CCDC174
TFIP11
PRPF6
SENP2
TRAK2
STRADB
TMEM128
SPTY2D1
KMT2A
SIKE1
ZNF180
USP16
POLR1H
RCE1
MCF2L2
CLPB
RNMT
FAM210A
NPM3
TRAP1
SIVA1
COX7A2L
PRR3
GNL1
CCNT1
RPL31
ZCCHC9
GZF1
SGTA
ZNF367
CBLL1
ZNF778
ENDOV
PDCD7
XRCC2
RPS28
NDUFA7
SPSB3
C1orf109
SF3A1
CCDC157
PSTK
GPR89B
UMPS
ZNF23
GCDH
ELP1
CCAR2
ABITRAM
HPS5
GTF2H1
SNF8
SESN1
EDC3
CEP57L1
CDK5RAP2
MBIP
TRMT2A
RANBP1
NAA40
SLC25A3
CAMLG
ZZEF1
CYB5D2
SSBP1
PHB2
CCDC150
ISCU
RAB8B
TIMM21
GOLGA1
FBXO15
RBM8A
MCM6
PACRGL
GID4
ATPAF2
RALBP1
ICE2
CAPN10
TXLNG
SLC35A5
LCLAT1
ATG3
UBA52
C11orf65
TIMM44
MALSU1
MKS1
ZNF337
MAP2K1
HINT3
MRPS14
UQCRFS1
WDR18
TRIM52
MTBP
MRPL13
EXO1
PSMG2
CEP76
RPS3
CCDC130
ZNF839
GMPPB
NUP54
ZNF266
TSFM
SENP3
TRMT10A
MTTP
LYST
UBE2I
PPP1R12B
ZNF436
EPRS1
MMGT1
THEM4
LAPTM4A
C1orf74
ARL1
PARP2
LEMD3
NARS1
WDR36
SKP2
LMBRD2
BCL10
MRPL39
CYP4F11
ADPRS
FAM174A
ATP6V0B
CIAO3
PDHA1
FBXL19
CLINT1
ATXN7L3
PNPLA4
ZNF165
TMEM231
FAM135A
YIPF2
TIMM29
WDR43
HNRNPA3
PFDN1
PEX12
GALK2
TPD52L2
POT1
KLC1
EEA1
SRFBP1
RBBP5
TUT7
KBTBD6
FUNDC2
CRYBB2
HEMK1
XPO4
EIF2D
FMC1-LUC7L2
FMC1
FAM76B
CEP57
DDX19B
TRIM37
GEMIN8
SPATA7
ADAT1
HPS6
LMBR1
SIRT2
SEC61G
NFKBIB
LENG9
FDPS
MTRNR2L6
RRP15
LSM2
ATL2
RRNAD1
ISG20L2
PRMT9
ZNF706
NAPA
CMSS1
FEM1A
PET117
KAT14
ROMO1
NFS1
DHX33
BOD1L1
RNF138
DEPDC1B
ASXL1
MARCHF5
CPEB3
SARAF
XRCC1
TMEM181
NSUN6
TIPIN
RBMXL1
KYAT3
MRPS11
MRPL46
TMEM199
POLDIP2
NUF2
GSTO2
NDUFS7
C5orf15
LOC100287896
LIPT2
ZNHIT2
ANKRD54
KAT5
MED23
ITGB3BP
EFCAB7
DCTN2
TMEM106B
USP36
SEC16A
C9orf163
ZSCAN22
TMEM175
GAK
IPPK
YTHDF2
TMEM127
CIAO1
TOR1AIP1
TMEM222
TIGD6
NME6
HMGXB3
BAG6
RNF7
WRN
PURG
STK11IP
SLC19A1
RAPH1
BICD2
SST
FOXK1
PITPNB
TMEM242
SLC35B4
TIMM10B
CCNH
ARFIP2
C9orf16
BCAS2
RTTN
MTX2
TOMM22
CYSLTR2
DSTYK
IQCJ-SCHIP1
IQCJ
ILF2
SZRD1
CABIN1
GTF3C5
COMMD2
ARF4
FMNL2
UBR2
KIAA2026
AXL
ZDHHC6
VTI1A
ZNF444
NSMCE3
ZNF550
ISY1-RAB43
ISY1
PRRC2A
KDELR3
ARF6
STX16
POLR2F
C22orf23
FTSJ1
USP17L3
TRAPPC2
OFD1
NDUFS3
KBTBD4
DDX18
PRDM4
YJU2
CYB561D1
TCTN3
RICTOR
MRPL21
IGHMBP2
C19orf48
ATXN2L
METTL23
JMJD6
SEC31A
E4F1
CTCF
USP22
SPRR4
SETD1A
FUT11
CSTF1
AURKA
COQ9
CIAPIN1
TIGD5
EEF1D
DALRD3
NR3C1
IL1RAPL1
CYP51A1
CCDC66
NDUFS5
ZNF213
ZNF384
SNX16
GNE
RPS7
CYCS
IFNE
ZBTB17
TNKS
SPAG9
ZBTB45
BMF
MAP3K10
MAP3K12
GCC1
DNAJC25-GNG10
DNAJC25
MAP2
IARS1
ZMYM3
NCOA7
ERAP1
TMX3
SLC25A36
CCDC102B
ELAVL2
ARHGAP24
SLITRK3
LYRM2
NEK1
GPR85
BCL7A
NCR3
PNKD
AAMP
PIK3R4
ZSCAN21
PAXBP1
B3GALNT2
LRRC8A
KYAT1
PSMD3
POU4F1
CCDC146
CACNG3
RPL26
COPS7B
MRPL3
DDX23
BRF2
LEMD2
ZCCHC7
SPCS3
SBDS
MTRES1
MIS12
DERL2
C17orf75
ZNF668
ZNF646
DPPA5
MANF
SLITRK5
SERPINB7
GET1-SH3BGR
GET1
CASC3
ACSM1
UBL3
USP17L7
PSG8
PABPC5
MECOM
UBAC1
HMOX1
ATAD2
RHOC
TSPAN13
BTN3A2
TMCC2
KCNH7
TIA1
POLB
PCGF1
HSPA6
CRBN
VMA21
LCMT1
SAMD14
RAB11B
PTPRM
CHKB
WHRN
THAP10
RD3
PIGO
PHYH
LRRC49
SLC2A12
SLC1A6
RUNDC3B
KCNH2
TRPV1
COA6
RBFOX2
CCNT2
ZFYVE1
SHROOM2
PPEF1
OSBP
NOMO2
HECW2
TMEM201
NDUFB3
FAM126B
USP17L1
RPL5
LIMD1
GCM2
PRCC
TEX15
PRMT8
PDIA4
ZBTB40
VIRMA
RBM6
DDX42
CCDC47
ARAP3
TRAPPC10
RNF38
MTF2
GRWD1
GCNT2
DGKA
SMAP2
KRTAP9-6
TYMSOS
TYMS
RNF165
WDPCP
TRIM39
MDH1
HOXB13
DNAJA3
EPHA10
ADO
SLC16A9
RPL13A
RNASEK
KPNA4
GOLGA6L6
GARS1
FUT1
CCAR1
HNRNPL
FRMD4A
FAHD2B
CPSF1
ALKBH3
CCN1
MZF1
ZNF3
SERPINA9
RTBDN
PDE4B
METTL3