ChIP-Atlas: Target genes

Potential target genes for XRCC4

Query protein: XRCC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4192132 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
XRCC4's Target genes

◢ XRCC4: Average

◢ SRX150504: K-562

◢ SRX4192131: MCF 10A

◣ SRX4192132: MCF 10A

◢ SRX4192136: MCF 10A

◢ SRX4192137: MCF 10A

◢ ERX177102: U2OS

◢ ERX177103: U2OS

◢ XRCC4: STRING

RBM42
TBL3
CWC25
SSNA1
ANAPC2
TRIAP1
TRMT61B
RLF
MRPL55
TRMT44
ACOX3
GPAM
RPS6KB2
NOC4L
DDX51
NUP153
MRM3
GLOD4
TMEM208
LRRC29
CCDC86
TFPT
PRPF31
GTF2H3
EIF2B1
AASDH
PINX1
POLR3F
DZANK1
FAM149B1
ECD
TSN
OXNAD1
DPH3
LANCL2
DNAJB12
PPIL4
CWF19L1
MIA3
ORMDL3
SPTLC1
MAGOHB
CHMP1B
ADPGK
FANCD2
NDC80
METTL4
PWP1
NUP214
MRPL4
ADAR
SUPV3L1
RMDN3
SSU72
ZNF721
PIGG
C1D
THUMPD1
TBRG4
PFAS
CMTR1
CCDC59
CCNA2
OAZ3
MRPL9
MAPKAPK5
MED9
PELP1
KPTN
C7orf50
RRM1
MRPL2
KLC4
ZNF26
EFTUD2
CCDC103
DUS2
DDX28
CENPW
SPHK2
RPL18
GTPBP10
AP2B1
WDR74
ATRIP
PPP2R3B
MAGOH
TRUB1
RAD18
NFX1
CFAP410
PROSER1
NHLRC3
PHF7
BAP1
POMZP3
SLC35E1
NOP9
DHRS1
HAUS5
MTHFSD
COPS8
SRSF11
LRRC40
C16orf91
SRRD
HPS4
NPHP1
ZNF614
RPL6
PTPN11
RANBP6
C2orf49
RNF139
BOD1
ZFPL1
CDCA5
PUM3
IPO11
PRKRIP1
FDXR
FAM122A
EXOSC9
CCDC124
TUBGCP6
BCL2L2-PABPN1
BCL2L2
DNAJC30
BUD23
RPS8
NAF1
EFCAB2
VPS37A
CNOT7
PIGU
CTDP1
GHITM
FBXW7
WDR4
POLR1F
IDH3B
BDP1
NCBP2AS2
NCBP2
NOLC1
TCTE3
ERMARD
AOPEP
SNRPC
RPLP2
NOL10
RNPS1
TRMT5
SLC38A6
DHDDS
VCPKMT
AP1G1
THAP4
ATG4B
SF3B5
ZC3H3
CACTIN
CDK11A
PEF1
WFDC3
DNTTIP1
UBR4
PSMB2
ZFAND2A
SETD3
CCNK
COMMD1
CCT4
CDK11B
ZNRD2
TBC1D22A
RANBP2
PLAA
IFT74
MFN2
WDR53
FBXO45
NUP155
CHMP4B
NAT10
EIF2S2
MAP3K7
ABCF2
PPWD1
CENPK
SLC25A16
WDR61
QTRT2
CCDC191
SPRYD4
RPUSD2
UBQLN1
TTLL5
ERG28
DHX40
NELFA
PGBD4
EMC7
SRPRA
CYP46A1
DDX49
COPE
RNF141
SECISBP2
WASHC5
NSMCE2
NDUFV1
BRMS1
MED20
BYSL
MECR
ZNF805
TBCK
AIMP1
ATXN1L
TAF11
ANKS1A
POLR2K
STX18
TMEM203
NDOR1
SMPD4
MZT2B
KIF15
KIAA1143
APTX
ATP9B
ANKRD17
RPIA
MIB2
THOC1
RABL3
GTF2E1
PSME3
RPL8
BET1
SDE2
USP14
WDHD1
SOCS4
RNASEH1
KIAA1109
ING4
OGDH
SKIV2L
NELFE
TMEM183A
UBE4A
TPR
ODR4
SLC35B1
CDADC1
CAAP1
WDR75
AP5S1
ARHGEF7
SLC25A53
SLC35A4
APBB3
ATAD3B
NDUFB6
ACAD9
C8orf33
USP8
TTI1
RPRD1B
UBAP2
MED6
NUP133
TMEM147
COQ7
PRMT3
MRPS17
SLC35F5
IQCC
ZNF576
IRGQ
ABT1
CCDC113
KLHDC4
STK19
DXO
RRP1
HDAC6
RPL9
LIAS
RPL23
NUP42
ZNF133
XAB2
NRAS
ZNF79
CNOT1
GPKOW
RFC1
PAK1IP1
C6orf52
MFSD14C
VPS4B
LDAH
SCFD2
GAN
ATAD3A
SNAPC5
FAU
ZC3H13
EMC4
NGDN
ZGRF1
LARP7
TUFM
SH2B1
RFT1
NUFIP1
GPALPP1
SERP1
EIF2A
MDN1
FAM156B
FAM156A
RNF166
CTU2
COX18
CBWD5
CBWD3
CBWD6
MFSD14B
DUS4L-BCAP29
DUS4L
COG5
MED27
ANAPC10
ABCE1
GTF3C2
DCAF1
CLPTM1L
RPS2
MMUT
CENPQ
GTF3C4
DDX31
CXorf56
DDX19A
FBXW9
ZC3H18
ATG7
ZNF268
PPIG
ZNF263
USP20
C9orf78
KLHL7
LRRC57
HAUS2
TOMM6
GNAS
LONP1
CATSPERD
SELENOK
DARS2
CENPL
RTF2
BLOC1S5
TBCCD1
DNAJB11
PHF5A
ACO2
CBWD2
MZT2A
POLA1
UTP15
ANKRA2
NIPA2
CLN5
ZCRB1
PPHLN1
SLC9B1
CHMP4A
KDM5A
CCDC77
U2AF1L5
U2AF1
ZNF830
CCT6B
C12orf73
PPAN-P2RY11
PPAN
PISD
OSBPL8
FAF1
XPNPEP3
ST13
MUL1
PPP4R3A
ALS2
UCHL5
RO60
FAHD2A
SMU1
GUF1
ZNF2
ATG5
ERLIN2
TTC1
ATG16L1
HBS1L
TBP
PSMB1
ELP5
CTDNEP1
TMEM230
BRCA1
GUK1
OTUD6B
ZFYVE28
CFAP99
IFT172
FDXACB1
C11orf1
SCAF11
FBXL18
ICE1
RPN1
KLHL12
LAMTOR5
TPT1
SENP2
PURB
GPR89A
SPACA9
AK8
METTL14
ZNF180
TAF9
RAD17
AK6
XRN1
ZNF181
NBR1
DNTTIP2
TFIP11
TMEM9B
SEC13
POLR1H
GAR1
ZNF304
ZNF653
RBM22
ERCC5
NRDC
PKN2
RTRAF
EEF1AKNMT
SAP30BP
RECQL5
GPSM3
C1orf109
NXF1
CBLL1
PRC1
ELOC
TMEM128
PEX10
FCF1
AREL1
FBXW2
MAP3K13
RBM18
MRRF
TRMT10C
STK16
GLB1L
METTL1
EEF1AKMT3
NHP2
USP42
ZNF460
RPL24
TMEM237
SIVA1
CLPB
ZCCHC9
EDF1
RPS28
NDUFA7
ELP1
ABITRAM
UMPS
SPTY2D1
TIMM13
RNMT
FAM210A
NCAPH2
LMF2
NPM3
PRPF6
ZNF23
MCF2L2
EDC3
CCNT1
COX7A2L
USP16
MTRNR2L8
SIKE1
ZNF367
CCDC150
RPL31
SGTA
GZF1
GPR89B
HPS5
GTF2H1
SPSB3
TPP2
PDCD7
SENP5
PRR3
GNL1
RBM15B
MAP2K1
CBWD1
LCLAT1
CCDC174
MRPS14
PSMG2
CEP76
PSKH1
C11orf65
ENDOV
NDUFA10
GCDH
TRAK2
STRADB
VAMP3
PHB2
TSFM
MCM6
MKS1
XRCC2
MBIP
ZDHHC3
EXOSC7
MALSU1
TXLNG
TIMM21
FBXO15
SF3A1
CCDC157
ZNF436
TIMM44
UQCRFS1
GOLGA1
ZZEF1
CYB5D2
CAMLG
N4BP1
CACYBP
UBA52
UBE2I
PSTK
TRMT10A
MTTP
PPP1R12B
CAPN10
TRIM52
GID4
ATPAF2
CCAR2
ICE2
CCDC130
CDK5RAP2
ZNF266
SLC25A3
ZNF337
RNH1
PACRGL
RAB8B
CENPBD1
ZNF778
WDR43
ISCU
RPS3
EPRS1
CIAO3
RBM8A
RALBP1
NARS1
SSBP1
HINT3
PEX12
FBXL19
NUP54
GMPPB
WDR36
WDR18
LAPTM4A
FDPS
NAPA
CCNH
C9orf16
YIPF2
TIMM29
ARL1
SKP2
LMBRD2
TMEM231
LYST
SESN1
CEP57L1
CLINT1
PFDN1
EXO1
MRPL39
ADPRS
FMNL2
MORF4L1
BOD1L1
DHX33
ZNF839
PARP2
ATXN7L3
TPD52L2
HPS6
TRMT2A
RANBP1
KLC1
ATP6V0B
FTSJ1
FEM1A
ROMO1
NFS1
SENP3
LEMD3
SNF8
SRFBP1
SLC35A5
ATG3
TUT7
SARAF
METTL23
JMJD6
MTBP
MRPL13
POT1
PNPLA4
LENG9
NAA40
PRMT9
BCL10
FAM135A
MMGT1
HNRNPA3
XPO4
KMT2A
PDHA1
LMBR1
NDUFS5
DEPDC1B
FUNDC2
CYCS
FMC1-LUC7L2
FMC1
THEM4
ADAT1
ZBTB17
FAM174A
GALK2
DDX19B
ANKRD54
SPAG9
C1orf74
KBTBD6
GCC1
SIRT2
NFKBIB
IARS1
TMEM199
POLDIP2
EEA1
XRCC1
TMX3
SLC25A36
CCDC102B
SPATA7
MRPS11
MRPL46
ATL2
NEK1
TOR1AIP1
NUF2
TMEM106B
ZNF165
FAM76B
CEP57
RBBP5
TMEM222
PNKD
AAMP
GSTO2
STK11IP
PIK3R4
EIF2D
ZSCAN21
TRAP1
CYP4F11
ZNF706
NSUN6
GEMIN8
LRRC8A
KYAT1
LSM2
TMEM127
CIAO1
C5orf15
DDX23
BRF2
PET117
KAT14
RRNAD1
ISG20L2
SEC16A
C9orf163
RTTN
SBDS
CMSS1
BICD2
C17orf75
ZNF668
ZNF646
SEC61G
NME6
SLC35B4
GET1-SH3BGR
GET1
UBL3
RNF138
ARF6
USP36
WRN
PURG
TSPAN13
ZSCAN22
TIA1
POLB
KAT5
HSPA6
DCTN2
HEMK1
NDUFS7
LCMT1
MED23
TIMM10B
ARFIP2
RAB11B
CHKB
PIGO
RRP15
UBR2
TMEM242
ZFYVE1
MARCHF5
CPEB3
TIPIN
RPL5
IPPK
PRCC
PDIA4
GTF3C5
KIAA2026
ZBTB40
VIRMA
RBM6
DDX18
MRPL21
IGHMBP2
RNF38
MTF2
GRWD1
PRRC2A
STX16
TIGD6
HMGXB3
TYMSOS
TYMS
MTX2
ZNF444
POLR2F
C22orf23
YTHDF2
ZDHHC6
VTI1A
RPL13A
RNASEK
KPNA4
FUT1
ZNHIT2
RNF7
HNRNPL
FAHD2B
ALKBH3
MZF1
SLC19A1
NSMCE3
ATXN2L
METTL3
DIABLO
TOMM22
DDX41
COQ9
CIAPIN1
PARPBP
NUP37
TPM3
PTGES3
PNPLA6
BAG6
E4F1
PNKP
CYP51A1
ZNF593
JARID2
EIPR1
C1orf232
ISY1-RAB43
ISY1
SZRD1
SUPT7L
SLC4A1AP
DSTYK
NME1-NME2
NME1
FZD1
ST7L
CAPZA1
TNKS
MTMR4
PITPNB
COMMD2
UBE3B
RPL23A
CDYL
PEX3
ADAT2
ARF4
TRIP4
CSTF1
AURKA
UTP11
RTF1
LOC100287896
LIPT2
ZBTB14
GGCX
SLBP
ZNF550
ERGIC2
BMS1
FUT11
SFSWAP
MIS18BP1
DNAJC27
C19orf48
DALRD3
SCAND1
SCAF1
PSMB7
POLR2B
ZNF446
NDUFS3
KBTBD4
ZNF384
ZCCHC7
SNRPG
H2BC18
TRAPPC2
OFD1
TBC1D19
MRPL44
JOSD2
GTF2H4
BCAS2
ZNF213
SCNM1
MRPS15
LYSMD1
HCCS
SETD1A
TMEM175
GAK
SEC31A
SF3B2
RUVBL1
ASAH2B
MTRNR2L2
TIGD5
EEF1D
YIPF6
SMG8
POLR3B
ASCC3
NCOA7
ETFDH
C4orf46
UBR7
PRRT1
PPT2
GON7
GMCL1
COX16
ITGB3BP
EFCAB7
NPRL2
FCSK
CYB561D2
H4C12
ZNF628
KAT8
BMF
CRBN
MTERF1
TCTN3
CCDC97
ZBTB45
ZNF589
RBM48
PEX1
MRPL3
VPS45
POLR3D
PARG
MANF
TRIP11
MNAT1
GORAB
B3GALNT2
ZNF25
MDM4
AURKAIP1
ZNF143
ZNF106
SUGCT
MPLKIP
DNAJC25-GNG10
DNAJC25
KDM5C
RGPD2
RGPD1
RRP1B
HSF2BP
MTRNR2L10
RCE1
MTRNR2L9
RECQL4
LRRC14
TMEM71
PHF20L1
CRYBB2
TRIM37
MTRNR2L6
ASXL1
TMEM181
RBMXL1
KYAT3
RAPH1
SST
FOXK1
CYSLTR2
IQCJ-SCHIP1
IQCJ
ILF2
CABIN1
AXL
KDELR3
USP17L3
PRDM4
YJU2
CYB561D1
RICTOR
CTCF
USP22
SPRR4
NR3C1
IL1RAPL1
CCDC66
SNX16
GNE
RPS7
IFNE
MAP3K10
MAP3K12
MAP2
ZMYM3
ERAP1
ELAVL2
ARHGAP24