ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359919 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX768290: HT-29

◣ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L8
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
KIF5C
ATN1
PTPN6
C12orf57
CCDC59
MAMDC2
PTPRN2
CCT2
MAN2C1
ART1
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
SNX33
IMP3
S100A1
S100A13
CHTOP
MTRNR2L9
SLC3A2
NDUFS7
LRP6
SRCAP
LOC730183
TMEM223
TMEM179B
PRMT2
CZIB
TMEM248
CRYAA
CRYAA2
DPP8
TTLL4
TBRG4
OIP5
NUSAP1
POLR3B
ATF7-NPFF
ATF7
NFYC
LARP1
SPAAR
HRCT1
MTRNR2L10
STEAP2
FOLR1
RTTN
CLK1
SF3A1
CCDC157
RAC3
DCXR
ZSCAN22
SRSF7
EMILIN2
PURA
USPL1
HMGB1
TMED1
PDCD2L
EIF4B
HSPBP1
BRSK1
AMACR
TMBIM6
EHMT1
ARRDC1
CAAP1
SUPT7L
SLC4A1AP
STAMBPL1
SLC25A6
MBD4
IFT122
DCP1B
ZSCAN25
TP53I3
SF3B6
FAM228B
H2AX
DPAGT1
HMBS
CAPRIN2
NBPF1
UTP23
VPS37A
CNOT7
SPOP
MYO1G
DNAJB12
LMTK2
NDUFB3
FAM126B
NAGK
RSL24D1
SMIM15
POLD1
NR1H2
SPTLC1
PISD
UBE3B
ST3GAL3
SNX8
SHANK3
PDCD6IP
RPL5
WASHC4
SMIM10L1
PRH1-TAS2R14
EIF2D
COL23A1
SEMA4B
RARG
TTC14
TRIP4
PCLAF
USP21
UFC1
FAM227B
DTWD1
DOK3
DDX41
TFDP1
VAMP4
CYP51A1
AP3S2
DENND4A
TOLLIP
POLR2J3
NDUFS3
KBTBD4
FAM180B
RBM28
C12orf66
MOGS
MRPL53
CCDC142
RAD51
MPHOSPH10
MCEE
EIF3CL
EIF3C
TNPO3
KIAA1958
C9orf147
PNP
PIP4P1
DUX4
MTIF2
DSTYK
GPN2
AASDH
BAZ1B
DYNC2I1
ESYT2
STRAP
L3HYPDH
JKAMP
FBXO22
METTL1
EEF1AKMT3
CYP27B1
THNSL1
POLG
HMGCR
XRCC6
DESI1
THG1L
ZNF408
ARHGAP1
PGBD2
ZNF687
STAT6
GNL2
TMED3
KTI12
TAF10
RRP8
ILK
TPP1
GMNN
LEO1
MRPL44
SLC52A3
SMDT1
PHETA2
NAGA
TRIM59
DIABLO
AKAP9
PPM1D
MTPN
LUZP6
P2RY2
EIF3E
AKR1A1
XPR1
VAMP1
TMEM88
NAA38
CYB5D1
MRPL45
PDE4A
CRYM
LUC7L2
TOR1AIP2
TOR1AIP1
REX1BD
SF3A3
HUS1
PAFAH1B2
CUL5
XPOT
OGDH
SSBP1
TTC4
NBN
GOT2
PRC1
WDR6
STYXL1
PPFIA3
LIN7B
C19orf73
MRPS17
MFAP3
FAM114A2
PRR22
MAP3K5
DUS3L
PRCP
DDIAS
KLHL12
NOP16
HIGD2A
C6orf226
RPS13
COX7C
GRPEL2
SAR1B
CYCS
MRPL1
SUGCT
MPLKIP
ZWILCH
SNAPC5
RPL4
BORCS6
TCAF1
ANO10
ABHD5
PPP3CA
TSFM
MRPL48
ACYP2
SEPTIN2
HDLBP
FNTB
KMT2E
NUP107
LARP4
FAM186A
MZF1
MGAT1
LSM5
AVL9
OSGIN1
TNRC18
LOC100129484
H2BC5
H1-4
UGGT1
STXBP3
AAAS
ITFG2
PSME3
BECN1
TLDC2
SLC12A9
C19orf33
MEST
KRT18
ZMYND15
TARBP2
NPFF
MED11
MAP3K12
CXCL16
NOP53
TEKT2
ADPRS
NDUFB2
EDEM2
GTPBP3
ANO8
HACD2
HEXA
ZNF394
ZKSCAN5
GOLPH3
PPIL3
NIF3L1
BORCS7
FIGNL1
FBXL13
ARMC10
CCT5
ATPSCKMT
TYW1
SBDS
SCAMP1
CDK5RAP1
SLC24A1
INTS14
ADAM15
TXN2
RAB27B
MRPL3
PFDN5
MYG1
HPS5
GTF2H1
NACA
SLC37A3
RAB19
FRMD3
ASNS
KCTD17
ATG9B
ABCB8
H4C5
H3C4
H2BC7
H2AC7
H4C4
ATP5MC2
PTPA
CRAT
MMADHC
UROS
BCCIP
KANSL1
PPIP5K2
GIN1
SWSAP1
C12orf65
MRPL42
YEATS4
YARS2
GPD1
COX14
PIK3R3
FUT11
CHCHD1
YIPF3
POLR1C
LRRC73
PMPCB
CEP83
PPIL2
MTRNR2L6
TSEN54
LLGL2
CASKIN2
DMAP1
MLF2
GNG14
DHPS
ZNF391
RFC4
MRPS36
WDR97
MAF1
CYC1
TSSC4
TARS3
TCTEX1D4
PLK3
BTBD19
VPS52
RPS18
B3GALT4
CDC42EP1
LGALS2
DPY19L4
ZNF165
OR1F12
MCCC1
EIF3J
AGK
UNC13B
CHST12
NHLRC1
SEH1L
ANO6
YTHDC1
BLOC1S2
ZNF789
ATP5MF-PTCD1
ATP5MF
CBWD5
CBWD3
ITGB3BP
EFCAB7
SECISBP2
CKS2
MALSU1
LTA4H
METTL7B
ZBTB45
SLC27A5
HAGH
FAHD1
LRATD2
NDUFAF1
MRPS31
KCNIP2
AHCYL2
PLEKHM3
CCDC43
ELAC2
DCPS
STOML2
PIGO
WDR4
TIPARP
LYSMD3
RAB5B
PMEL
CDK2
COL6A2
CBWD6
TDG
C12orf73
NRL
DCAF11
DCAF10
SLC25A28
BCDIN3D
CLUH
RPS27L
MCRS1
INTS2
SIGMAR1
GALT
POLR2J
TMBIM4
MBTPS2
CCDC97
RPS6
TPM3
IL11RA
BNIP2
TATDN3
NSL1
SNX17
EIF2B4
GARS1
SND1
TBC1D19
PAIP2
SRGAP1
DDX21
CNOT2
CHAC2
CASC3
PSMD9
HPD
SNRPE
GPR35
SLC25A21
ZNF212
MRM3
GLOD4
PDE7A
RNF111
HNRNPA1
CBX5
WDR70
NUP155
GHITM
TRAF6
RAG1
FAM71E1
EMC10
ORC4
MBD5
TMEM251
MRPL35
MOAP1
IMMT
YY1AP1
DAP3
DDX46
TTC26
ZMPSTE24
BLOC1S6
ASCC3
HNRNPU
RGS11
TMCO2
TAF5
CALU
CCNB2
PEX3
ADAT2
H2BC6
GPN3
FAM216A
RAPGEF6
FAM120B
CFAP298-TCP10L
CFAP298
RBM6
GABPB1
DLG4
BBS9
ACADVL
SLC11A2
B9D1
RNF14
SMPD1
KBTBD8
EID1
PCID2
CUL4A
MRPS35
NDUFAF2
ERCC8
FGFR4
SEC11A
DRD4
TMEM87A
GANC
MYLIP
UBE2K
SIRT6
ANKRD24
MBD1
CXXC1
RPS5
POLR2J2
LPCAT4
TMEM168
PDIA3
TYW1B
TSSK4
TPRA1
MDP1
MCM2
CHMP4A
FIS1
AQP6
AQP5
THOC3
COX18
TMCO6
NDUFA2
IK
TBK1
CLDN15
CD14
SMARCAL1
SLMAP
FANCA
BMF
PSMC4
RRN3
PRKRIP1
ATG5
MTHFS
NPM1
NBPF12
PMF1-BGLAP
PMF1
AK2
TFPT
PRPF31
ZBTB3
POLR2G
MYO19
GGNBP2
NUP214
VIPR1
TAF6L
PIGW
RPS26
ZCWPW2
USP8
SLC25A13
FAM168A
AZI2
GET4
TRMO
ARHGEF19
TBC1D14
CHCHD3
PRLR
CCNC
ZNF250
ZNF561
UQCRHL
SORD
CHMP7
CEP70
ATF2
COMMD1
CCT4
TOMM22
RTF1
TMEM238
TMEM190
RPL28
FAM185A
SLC10A7
RAD51AP1
C12orf4
SYCP2
PPP1R3D
FAM217B
TRUB2
COQ4
EIF4A3
ZNF770
FAM133B
USP30
MRPS18C
HELQ
WDR61
TRAPPC4
RPS25
PUS7L
IRAK4
PRPF8
NME1-NME2
NME1
PAAF1
COA4
GLCE
SRSF2
MFSD11
RINT1
PUS7
WDHD1
STT3B
SOCS4
NARF
CYBC1
ERAP1
PCNP
ADIPOR2
TMEM209
SSMEM1
PARP2
ADSL
SLF1
KIAA0825
INTS7
DTL
ARIH1
TFB1M
PIGF
GSTM4
CRIPT
BRF2
TSPAN31
CDK4
AGAP2
SCAND1
FANCD2
LRRC57
HAUS2
MARCHF9
ICE2
RPP25
NUTM2E
HECTD1
BPHL
STX18
NUP42
H4C8
GTPBP10
GOLGA3
RFC5
TRIM36
INO80
DNAJC19
CTSL
ANKRD13D
TMEM230
PCNA
CDS2
SDHAF3
CRADD
NXT1
DUS2
DPEP2NB
DDX28
CETN3
NUDT1
MRM2
MAD1L1
TRIM56
H3C13
H2BC18
H2BC4
H2AC6
RASA1
SLC25A17
OCIAD1
LIPH
HCFC2
GLT8D2
BRMS1L
CNPY3
PPWD1
CENPK
OTULIN
FGD4
NDUFB7
PARL
ZCWPW1
PPP1R35
MEPCE
ATG4C
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
TNS2
NAV1
EFHD1
CCDC77
KIAA1217
PSMD8
POP7
KDM5A
RASSF6
SUMF2
TMED5
NOP2
CCDC18
CAP1
PEX12
AP2B1
IPP
RPS15A
FKBP9
NUDT15
ZDHHC17
TAF13
RPRD1A
PTPN23
PKD1L1
NAT10
THAP9
SEC31A
SMIM4
NT5DC2
SCFD1
RPS3
SCAMP2
ZBTB49
LYAR
TRUB1
MAP4K5
CLSTN1
ATL1
PGAP2
CFAP43
KNL1
DYNC2I2
TMEM167B
FOXJ3
KBTBD3
AASDHPPT
KAT7
PDIA4
COA1
SCYL3
CLDN4
CSDE1
TFRC
ZFC3H1
THAP2
NR4A2
NAA35
METTL8
ESR2
DCAF17
H4C9
H2BC12
H2AC12
ZNF786
ZNF672
RGL2
PFDN6
NOL7
SDHD
SPATA5L1
GATM
MVK
RIF1
CMTR2
TEDC2
SLC25A11
RNF167
PFN1
ENO3
DTD2
DHRS4
CCNT1
TMEM267
NOP14
GRK4
PA2G4
THBS4
MTX3
EXO1
TBC1D9B
SERINC4
SERF2
PLD6
KITLG
HYPK
FBXW7
EXOSC10
SRSF11
SLC12A6
NUTM1
NOP10
TRIP6
SRRT
RAB11A
PLPBP
YWHAE
THAP5
DNAJB9
STYK1
PPP2R5C
NAPRT
MROH6
PMVK
PNPLA8
PPA2
EIF2S1
CENPS-CORT
CENPS
ATP6V1D
P4HA1
UNC50
COA5
SYNCRIP
PLEKHF2
TMEM106B
SLC1A3
POLB
PLPP5
LPAR5
KLHL18
KIF9
HSD17B4
C6orf136
SMG8
RPL6
PTPN11
KRT8
MICU2
TRIM3
TIMM10B
ARFIP2
MRPL24
ZBTB6
RC3H2
NIPA2
NOL12
PCLO
PSMD7
L2HGDH
JMY
DMAC2L
ATP5F1A
ASH1L
MRPL16
AMD1
OGG1
ZNF740
CSAD
CEP135
PWP1
PRMT9
MIF
CDK19
SMIM41
ATG101
TMEM260
TET3
ZC3H10
RPL41
ESYT1
TARS1
C2CD2L
CSE1L
USP48
TMED4
DDX56
SPRED1
TMEM116
ERP29
ARHGAP18
LOC102724770
DGCR6
OARD1
NFYA
GFM1
LEMD3
EIF4H
METTL2B
CTH
MAPK1IP1L
MRPS18B
ATAT1
YWHAG
CYSTM1
PBLD
HNRNPH3
C15orf61
LCMT2
ADAL
RPP21
MATN1
TIMM13
RPL39L
GINS3
BCKDHB
APC
ANAPC10
ABCE1
PRR19
PAFAH1B3
C1QTNF5
ETNK1
MAP2K1
USP2
LAG3
C11orf65
ILF3
DECR1
GPT2
SEC24A
MBD6
DDIT3
SETD4
POLR2E
MFRP
GPX4
EVI5
CBR1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
ISG20
ADPGK
EPS8
LFNG
UTP20
HEMK1
C3orf18
RAD52
SGK2
PRMT3
RHBDD1
TXNRD1
MRPS30
GTF3C4
DDX31
CHEK1
BCAT2
RNF13
IVD
SARNP
ORMDL2
IPO11
DIMT1
IPO8
OTUD7B
FEM1B
FAM102A