ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584310 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◣ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PSMD1
ZNF335
RABL2A
NME6
RABL2B
NUP85
CACTIN
MAPKAPK5
IPO13
VDAC2
VTI1B
POLR3F
DZANK1
NVL
HSPA9
PSMG2
CEP76
TAOK3
SUDS3
DYNC1LI2
FAM187A
EFTUD2
CCDC103
GOSR2
RWDD1
NUP205
LYRM4
FARS2
TBCK
AIMP1
SRD5A1
RPL21
BLCAP
REXO1
HADHB
HADHA
EXOSC5
BCKDHA
POLR2E
MRPS7
GGA3
STAM
C19orf48
PES1
STAM2
NCLN
FRG2C
UPF2
ATP5MG
DCTN1
SKP1
ANAPC7
FARSB
TSNAX
ZNF576
IRGQ
TSN
SART3
ISCU
PNO1
TTC8
ZRANB2
SEC61B
ALG2
COX7A2L
RABGGTB
PDAP1
BUD31
XPNPEP3
ST13
ZNF503
CAPRIN1
SMC2
PCBP1
SF3B3
COG4
TMED1
VARS1
HOXA4
PI4KB
RBBP5
SMPDL3A
ACTR10
NDUFA4
IQCG
RPL35A
PROSER1
NHLRC3
RPS27A
CLHC1
RPS23
ATP6AP1L
SELENOF
HS2ST1
GOLGA5
FZD8
EIF4ENIF1
SLC35B1
DPH6
LBX1
PSMD12
UFM1
OSGEP
APEX1
PAK1IP1
C6orf52
ADK
AP3M1
MRPS5
FGF19
RPS12
ANK2
NFKBIL1
DDX39B
ATP6V1G2
RBKS
BABAM2
SUPV3L1
APOM
BAG6
ARHGAP24
USP1
DUX4
NEUROG2
FAM104A
C17orf80
HES3
ABCG2
ICE1
ARHGAP11A-SCG5
ARHGAP11A
TLE1
TM9SF1
FOXP2
RPS29
LRR1
TMEM120B
MYLK4
DBX1
PTGES2
SUCLG1
TLE4
EVA1A
LRATD2
NCOR2
PCDH11Y
COMMD1
CCT4
PDE1B
TMEM14A
C16orf91
PIN4
DCTN3
ARID3C
OR6B2
NDUFA10
FRG2
PAF1
SYNPO
SEC22B
RPL7
RDH10
TRIM71
ATOH1
PDZRN3
PDHB
PRUNE2
BNIP3
KITLG
MSX1
METTL11B
PRDM13
TPM1
WT1
HES1
PIM1
RGS12
VEZT
FGD6
FOXD3
RND3
TRABD2B
CCN1
PRDM12
LRIG3
TMEM107
KCNK16
PDHX
APIP
LRAT
MRTO4
EMC1
MEIS2
SPTBN1
USP17L20
USP17L22
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CD69
TPO
SH3BP5
NEUROD1
DAPL1
ZFHX4
DTX4
TAF9
RAD17
AK6
STK36
RNF25
IGFBP2
AGPAT3
ID2
OAZ3
MRPL9
CEP41
CDX2
ERRFI1
ZCCHC13
EIF2S3
GALNT14
HOXB3
HOXB4
SOX21
AGMO
C10orf90
FHL1
RBP3
PDE6B
HOXA3
SPACA1
SEMA4D
NRARP
ZNF608
OTUD6A
PMAIP1
CTXN3
ID1
B3GALT2
GPR176
NEBL
TRMT9B
RAI14
NEUROG3
GORAB
ATOH8
SEC11C
DHRS3
CACNA1D
CCDC88C
LIMK2
KIF21B
VAV3
RSPH9
CETN1
MXI1
TEX2
KCNK10
PRRX1
DMRT3
HOXD3
HPS1
IL17B
TPRA1
GUCY2C
PDE12
HOXA2
BAIAP2
NTM
CCDC200
SLC7A5
JAKMIP1
TLE3
PPP1R12B
CCDC198
ZGPAT
ARFRP1
SKIL
CNPY2
RARA
POP5
HMX2
SPIRE1
ACVR1
C1orf105
NXPH4
KLB
LRGUK
MTMR7
ELAPOR2
UBE2I
TLE2
PGPEP1L
NEUROG1
BFSP1
CEBPD
SLA
OSER1
CDC73
LMO1
GTF3A
NUTM2D
DDX3X
PAM
NPAS1
GSX2
TSPAN13
REV3L
BICRA
HOXC5
SNRPN
FLVCR2
OR5A2
MXRA7
CHD7
LRIG1
FGD3
GADD45GIP1
POU2F2
ERCC1
PHC2
DLG2
PPFIBP2
ZNF746
NEO1
PRRC2C
TPST2
CLEC18C
CDH16
FGFR2
CRABP2
DMBX1
SCARF1
PCBD2
MNX1
FOXP1
MUSTN1
ITIH4
SSBP2
TMEM237
TRPM3
ST18
RUNX1T1
DMD
TTR
EBF3
ZFX
PPP1R3D
FAM217B
PLCH1
MRPL38
HDAC9
ST8SIA3
TBX3
RGL1
CYP26A1
USP17L21
USP17L12
USP17L11
HOXC4
ZNF383
ID3
DSCAML1
USP17L18
USP17L19
PHOX2B
GNG12
METTL24
ZNF367
PREX2
TNFRSF19
ELMOD2
RPN1
USP17L15
FMN2
GTF3C4
DDX31
CLDN2
SYBU
MEF2C
RAN
FSTL1
ALKBH5
DONSON
MEIS3
SLC2A9
LHX2
CNN3
SPCS1
GLT8D1
SLC39A14
TMPPE
GLB1
RCOR3
HNF1A
CS
CAMTA1
HPD
CHD8
MAB21L2
LMO2
FAM181A
KLHDC7A
GPSM3
PBX2
HNRNPA2B1
CBX3
CHMP4C
CLRN1
NR2F1
IPO11
NXT1
ARHGAP10
RCOR1
B3GALT5
ZNF853
QPRT
DLL4
PDPN
LIX1
MS4A4A
CASC3
RARB
PCDH18
LIN28A
REC8
VANGL2
LGALS12
VSTM2L
NEK3
LRRC10B
KRTAP12-1
CCDC33
KMT2A
IGFN1
NRCAM
CLEC18B
CATSPERG
FAM162A
CCDC58
CPLX1
TSPAN11
AXDND1
VOPP1
CDRT15L2
KIF26A
CNTN1
NEUROD4
MMRN1
CFAP221
ABAT
SH2B1
HRG
ARHGEF28
OAZ2
PHTF1
DDO
LMO3
SRSF11
LRRC40
FGF10
TRDMT1
GSTP1
TSPYL1
DSE
FGFR4
ARHGEF1
MYLK3
RASSF10
PRSS47
KAT6B
PAX8
DUSP2
GCSAM
MAD2L2
DRAXIN
DCDC2
SPOCK2
CDH18
LOC102723360
MECOM
WBP1L
GAS2L3
OMD
BAHCC1
SOX6
ADM
IGFBP6
SOAT2
SH3BP4
DUSP4
PEX2
ANKRD6
ID4
HNRNPD
SIRT4
FAM107A
FRS2
JUN
TP53INP1
ZP4
INSM1
BBS9
LEFTY2
CDCA7L
ANKLE2
DLX4
LZTS1
DUSP6
SP5
RBPJ
ARID3B
NFE2
DNAJB7
KDM2B
CLGN
GATA4
TMEM70
ELOC
MALRD1
MYRIP
MTRNR2L2
MSH3
DHFR
RBBP7
TRIP10
GPR108
GADD45G
CCNDBP1
GRSF1
KAZALD1
ARSG
KDM8
CR1L
SPATC1L
MTRNR2L1
MRPL34
ABHD8
MSX2
PAX6
RASSF2
IER3
FLOT1
LPIN1
NDUFS7
TCF7L2
FGR
IFI16
PKDCC
HOXB1
PLEKHO2
INAFM2
HOXA1
MBD2
CBX4
SH3BP2
RNF149
UPF3A
SULF1
CITED2
ABLIM3
LYL1
RPS10-NUDT3
RPS10
KDM6B
HUS1
HEXIM2
PANK4
HES5
ETFBKMT
MTRNR2L8
TESC
RPS24
POLR3A
NELFA
DDA1
HSPA1B
ARID5A
STK38
ZFHX3
KCNAB2
JAK3
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
FRAT2
RPS6KA1
SEC14L1
SMC6
GEN1
SASH3
C11orf24
C12orf73
MRS2
SLCO4C1
ATG16L2
HOXC6
SNCG
MMRN2
KDM3A
GRHL3
PRDM10
UBXN10
TBC1D8
CCDC88A
SPECC1
LYPD1
BRWD1
ARHGEF10L
NADK
NCOA2
FGFRL1
DGKZ
ENO1
PLAGL1
WDR6
KLF17
NBEAL2
BIN2
SNX1
CIAO2A
SKIV2L
NELFE
NKD1
EFHD2
OTX1
FAM110A
CPSF4L
TMEM104
NAT9
LPCAT3
MTMR4
DIAPH1
NBPF1
EMP3
CCDC114
ZNF76
TRAF4
PLEC
USP15
SNX3
LRRN4
WNT10B
RARG
MEF2D
KMT2E
LNPEP
CABIN1
PPP1R18
RASSF5
SPG7
CDC42EP3
DENND2D
CCDC174
DIAPH3
IMPG1
LIG3
CBFA2T3
SHOX2
RSRC1
POR
ZCCHC3
ZSWIM6
NFKBIA
IQCH
AAGAB
TYRO3
ZNF414
ZDHHC1
CD38
INAVA
ING1
VAV1
HEBP2
TRERF1
BCL3
CMTR1
TUBB
RAC2
ATP23
PNKD
CNOT2
FTL
IQGAP2
PCNA
POLR2J3
GPAA1
EXOSC4
MEOX1
RNASEH2B
MINDY2
OTUD7B
NTRK2
PKN2
PKM
H6PD
PPIB
RXRA
RAB11B
NDFIP2
COL23A1
MAPKAPK3
RYBP
SHB
CDX1
ANKRD1
SMARCD2
SMAD3
GALNT10
PLCB2
USP3
NKIRAS1
PDE4D
ADCY7
PCTP
IFRD2
PEX14
DFFA
YTHDF2
FAM120B
HMGCS1
PRDM1
ARHGAP4
CYP51A1
LRCH4
FBXO24
CFD
MRPS24
SLC35E2B
HESX1
PXYLP1
TBRG4
ADORA2A
HIBADH
ARIH2
TXNRD1
TUBB3
NR1D2
RNF139
SH3TC1
CYCS
ZDHHC4
ZNF740
CSAD
RNF166
IGF2BP3
CNTN4
SP7
BNIP2
DYNLL1
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
ARID2
LTBR
DPP9
ANKMY1
ERI3
CLIC4
SEMA6D
NR2C1
CPT1A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
DTNB
TTI2
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
RBL2
HAND1
HOXB5
SRPRA
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
HHIP
FAF2
C12orf29
ZNF3
ADGRL2
UPP1
CALM2
ZNF341
CD164
CTTN
SLC39A13
SLAMF8
TYROBP
ANKRD13D
SLC25A6
TRMT6
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
BAZ1B
SPATA25
LAPTM5
PRRC2A
AIF1
USP42
MYADM
NOTCH2NLA
UNC13D
STX18
CDC42EP2
SLC10A2
SBNO2
CLTC
PIP4P2
ARHGAP45
MAP2K1
MAD1L1
CXXC4
SYNJ2
ZNRD2
MTF2
KCNH2
FAM89B
EHBP1L1
RXRB
IL21R
PPCDC
MTCH1
DGAT2
CENPH
SLC43A3
SEH1L
DNAJB8
ZNF25
RNF125
H2BC5
H1-4
PHF19
RASGRP2
LYPD6B
ERLIN2
PEAK3
THRAP3
COX5A
WDR59
MRPS31
NAGLU
GFRA3
NOTCH2NLC
MIDN
MAP1S
EIF4H
KRI1
CDKN2D
TTYH1
EPM2A
MYO10
RAD50
PIKFYVE
PKNOX1
ZBTB17
KAT6A
SDE2
ARL4A
UROD
HECTD3
BHLHE40
GATA3
NR1D1
HSD17B8
PSMD3
FBXO41
SMPD1
ZNF595
RFESD
ADAM17
SALL1
STRADA
ITPRIP
CCDC88B
KEAP1
ARHGEF38
ACOT2
RWDD2A
PGM3
FMNL1
TMEM123
CPVL
CHN2
MC1R
PRKCD
MTRF1L
WTAP
BCAT2
RASL10B
LSM5
AVL9
MAGEF1
GRK6
CPNE5
NUBP1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
GAD2
SLC39A7
PANK2
MYCBP2
ZNF318
NTAQ1
ASNS
USPL1
SLC22A2
HMGB1
H3C12
H2BC17
H2AC17
PEX3
IFNGR1
ADAT2
TCHP
KRT20
ATAD3B
UBL7
SCMH1
DYNLT1
VPS37C
C1orf159
HES7
SH3BGRL3
FXYD2
GPX4
NOTCH2
OR2L13
OR2AJ1
MAST2
GPATCH8
NGRN
MCU
SALL4
PNRC2
SACM1L
CISH
TCF4
TIGD5
EEF1D
CBWD6
BNC2
EOLA2
RER1
MORN1
ZNF436
SCAMP2
DPEP1
ARF3
OST4
CAPG
RPL17-C18orf32
RPL17
C18orf32
RUNX1
RNPEPL1
GRIP1
ARHGAP27
BUD13
KLHL25
NIBAN2
DDX23
LGALS1
FAM227B
FABP5
DTWD1
YBX2
GABRB2
ARHGEF18
NCBP2AS2