ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GH1
RAB37
SMCO1
KRBA1
KCNJ15
UBC
MTRNR2L8
NUF2
TTLL1
CCDC130
ZNF761
RERE
PRSS38
LOC102724265
TTLL12
MTRNR2L2
MSH3
DHFR
MMEL1
DCP1A
GBA
FAM184A
BSDC1
ITGB3BP
EFCAB7
RABGAP1
NPAS4
HTR5A
FRG2
LCE3A
LCE3B
MTRNR2L1
SLC24A1
INTS14
SLC44A1
DEFA6
STX16
PCDH1
DRG2
PARP15
ST20-MTHFS
CXCR2
ZNF623
APOA1
CLDN18
TSC22D3
KRTDAP
COMMD2
ZFP30
ZNF76
GCNT7
FAM209A
FAM207A
RNF217
MTNR1B
IFIT1B
ZNF317
TMEM229B
GNG13
NWD1
PEX3
ADAT2
TRIM9
GNAL
YTHDC2
GPD1L
GTF2H2C_2
GTF2H2
IMMT
POLE4
CADPS
ZNF670
APRT
DNAH14
OR2A12
MTF2
SUB1
EIF2D
FAM227B
DTWD1
RAD54L2
C1orf100
SLC44A2
MST1R
C2orf88
DOCK7
WDR11
FRG2C
GALK2
COPS2
SAMD4B
ZNF324B
ATP1A1
MATK
CDHR1
DNAJC22
SSBP1
FAM72C
SLAMF9
INTS5
HSD17B6
CPNE5
RBBP5
PDE7B
ACYP2
TRIP4
SF3A3
SMIM17
CTAG1B
CTAG1A
ANP32D
TPM1
SCRT2
ATP5MC2
STX6
PSMF1
INTS12
GSTCD
IPO4
DOCK3
NSFL1C
TEX38
ATPAF1
PLIN1
ALG10B
PGBD2
COL23A1
NDUFS7
NRF1
STX18
DNAJC25-GNG10
DNAJC25
DCAF10
CCNC
TIAM1
UIMC1
MRPL16
MFAP3L
FUT8
SRGAP2B
FAM72D
TRIM29
PDE11A
GTF2H2C
EPB41L4B
SRRM3
DRAM1
TMEM89
JMJD1C
REEP3
MKRN2OS
MKRN2
TRADD
FBXL8
B3GNT9
NDUFS3
KBTBD4
GABPB2
IGFALS
SLC27A5
TMED1
ZNF205
BCR
PAXBP1
HMGB1
DHRS2
USPL1
MRPL3
PRMT5
MRPL22
GEMIN5
VMO1
GLTPD2
RPL27
NTSR2
RNF24
DEGS2
DPY19L4
SPRR2F
ANKRD40
WDFY1
SRGAP2
FAM72A
AURKAIP1
TACO1
VPS13D
S100P
DMAP1
B4GALT7
TVP23B
AKIRIN1
TPBGL
TMEM41A
TRAM1
BARHL1
GNB3
LEP
USP30
FBXO17
OR10G2
MED23
LRRC59
RPS29
NFAT5
SLC39A13
TSPAN14
SEC22B
RGPD8
RGPD5
EXD2
RGPD6
SEC13
LRRC37A3
EEF2K
DSTYK
FOXO1
ANGPTL4
WDR36
ZER1
FSHB
RBBP8NL
DUX4
C10orf88
BCL9
KRTAP10-12
BCAR3
TCF7L2
HMOX1
TSNAX
KMT2A
ATR
MTHFD2L
GRM4
AKAP13
AKNA
CREG2
RHOT2
POLR2C
AADAC
RGPD2
RGPD1
PRELID3B
PPA2
DYNC1LI2
TATDN3
NSL1
MNAT1
RPS14
ST6GALNAC6
DUSP6
SCMH1
ACAA2
DCLRE1B
AP4B1
ZNF697
SRGAP2C
FAM72B
ISM1
GTPBP6
CBX1
CDC73
HUS1
GNB2
CFAP73
MFAP3
FAM114A2
AQR
PRRG2
NOSIP
LRRC10B
EPS8
ANKRD46
DHX8
FAM102A
ZNF829
ZNF568
OPA1
TMEM259
CNN2
PDE4C
SPSB1
PPFIBP2
SNRPB
NEUROD4
HERC3
PYURF
PIGY
LUC7L2
FMC1-LUC7L2
FMC1
MRPL44
EIF3F
CEP135
TCF3
LHX6
DLG2
SLC33A1
TOR1AIP2
TOR1AIP1
GRPEL2
TLE5
REXO4
ADAMTS13
YPEL1
SV2A
TMA16
ZNF354B
EGFLAM
FRG1
DUS1L
TEFM
TSEN15
CCSER2
TNFRSF13B
PPP6R1
EPRS1
TUBGCP3
SPATC1L
DYNC1I1
MAPK1IP1L
CRLF3
RNF168
TRIM16L
C16orf89
ZNF527
DAG1
IL10RB
CALM1
CABIN1
DHTKD1
CPLX2
IQSEC3
SMARCD2
TMEM39B
LRP2BP
NUAK2
DRAP1
C11orf68
RRP15
FUT10
CYREN
ATP5MPL
CHD1L
PRKAB2
STX1A
TJP3
IRAK2
POLR2J3
GTF2A1L
FXN
CD86
PHKG1
GTF3C3
CLUAP1
C16orf90
TOP3B
IRF9
SIKE1
NOD2
CLEC19A
C1orf68
SCCPDH
CCDC88B
WWOX
TNFAIP3
CLK3
ZNF621
NFKB2
FECH
USP54
VSIG10L
UBE2F
TRMT61B
UTP11
XKR8
RNF149
KRTAP10-7
CEP72
AGK
NKAIN4
FAF1
CAPN2
TMEM242
NCOA7
ALKBH3
VPS13B
ZNF438
LAMP1
FAR1
ZMIZ2
TMPRSS11F
RPS7
TTC26
BRF2
SDHAF3
EP400
ALDH3A1
C10orf95
C9orf152
ATP2C1
ANXA11
TP53I3
IGSF9
PDCD7
CCDC115
ZNF286A
ANKRD52
C19orf18
TTC32
TDP2
ACOT13
SLC25A51
FAM98B
DDX1
CCDC107
LARS2
PLEC
CERS3
GTF2H4
ZNF557
ZNF197
LPCAT4
ARHGAP40
STK39
UBA52
CIAO3
TBCD
DPH6
HPCAL4
INO80C
ZSCAN22
CCAR2
C8orf58
GLIPR1L1
CAPS2
ANKRD36
FNTB
NRG3
RPL37
DISP1
TDRD7
B3GLCT
C5orf49
AQP4
FRAT1
CHAC1
CLDN8
PPIP5K2
GIN1
ILF2
ADRM1
FAM71E1
EMC10
MRPL38
EPB41
CTNNB1
MGST3
TBL3
SLC35G4
RNF151
SCARF1
BLOC1S5
PDS5A
RILP
MED12L
MYO9B
HAUS8
CARMIL2
TNFAIP2
NME1-NME2
NME1
C8orf37
IL36RN
IL36B
ZNF350
YIPF2
TIMM29
CACNA1S
ASCL5
STRBP
TMEM43
CHCHD4
JOSD2
ASPDH
MRPL55
CXCL6
LTB4R
LTB4R2
CIDEB
SRD5A1
AP3S2
ABCA3
UCKL1
NUP155
RNF7
ANKRD2
OR4K17
SESN1
CEP57L1
CGGBP1
C3orf38
B3GAT2
FZD1
RPL6
SAYSD1
PTPN11
LUC7L
ZNFX1
AARS2
TMEM222
TIPARP
DGKA
ASB6
RAPH1
PYM1
ACKR3
ADAM22
WIZ
FAM162A
CCDC58
SYT3
NAA60
TMEM68
TGS1
TPR
ODR4
KRTAP12-2
FPR3
TBC1D19
SEM1
TUT1
HSPE1-MOB4
HSPE1
HSPD1
SNRPB2
COG2
SELENOT
SFT2D2
USP22
SNAPC2
CASZ1
RASSF8
CRISP1
NDUFB3
FAM126B
SLC39A3
FLYWCH2
KMT2C
SQSTM1
MGAT4B
KANSL3
FER1L5
FAM133B
GCFC2
HARS2
HARS1
PLK1
BPTF
CLN6
UGT2B4
UTP3
CPPED1
CCDC174
TSPAN10
NPLOC4
DNAJC11
RSAD1
KDM3B
CCDC33
TMEM248
TMCO1
RASA2
NSUN3
DHFR2
SNX18
ADPRHL1
CACNA1E
SNRPE
CRNKL1
CFAP61
TBPL1
CYP51A1
FOXN3
PSEN2
PUM1
POLR2J2
PTPN4
SNX19
ZNF891
ZNF10
DPH7
SCIMP
MT1X
SMPD2
PPIL6
PCBP3
ZNF721
PIGG
CFAP45
ZNF572
AFAP1L1
AASDH
HMGN4
NCF4
CRYAB
MLST8
CLDN19
C11orf52
FRMD5
PRR15L
MAPRE2
BNIP1
POLR3E
DGKZ
CD55
ABL1
RALGDS
OR2T1
CCDC69
GALNT10
DUOXA2
DUOXA1
DUOX2
CITED2
CAMKK1
SGSM3
SLTM
ZNF331
PRKCZ
RBBP9
GTPBP3
ANO8
CRH
KNL1
PET117
KAT14
ATXN2L
DLC1
WDR41
ZNF529
C7orf25
RNF11
MDM4
EIF3G
TET3
ZNF354C
POGK
SLC37A4
SIGIRR
BIN1
MAD1L1
TRMT5
SLC38A6
DHX16
DDX46
HES3
KRT3
NAXE
GSTM5
MTR
TARS3
NBN
VAMP4
FAM3C
ZNF33A
CCDC112
RGL1
HOXB9
FOXJ3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PLAGL1
CACHD1
VWC2L
CFAP36
MFSD4B
MKRN3
MECOM
C1orf115
OR10A3
CD53
OR4X2
YPEL3
SUPT7L
SLC4A1AP
C17orf75
NMNAT1
LZIC
NPL
RNF145
THAP4
ATG4B
ZNF879
CD8A
IRF5
GNPAT
C1orf131
ANKRD62
ADPRH
MRPS18C
HELQ
MRPL1
IAH1
METTL9
SAXO1
EXOC2
RBM28
ERI1
VPS37D
RRAGA
WASHC5
NSMCE2
DNMT3B
FKTN
SMIM31
ZNF582
TRAF6
RAG1
FBXO22
HNRNPD
VPS25
SYT7
NHSL1
TNFAIP1
IFT20
TMEM18
SPAG8
HINT2
ZP3
IGFBP3
EHF
MRPL21
IGHMBP2
RPS3A
METAP1
PRR14
WDR7
EFCAB13
MTG1
MARCHF11
SRGAP1
NDUFA2
IK
IL13RA1
C13orf46
BANP
FGFBP3
RNF6
TSKU
FAM24A
ZSCAN9
GDF11
ZMYM3
PABPC4
TNRC18
MAP3K13
GPRIN2
SLC26A5
RBPJ
CLUL1
DPP9
NDUFAF1
FKBP5
SARAF
PDHB
VANGL1
NUDT17
SLC16A1
CORIN
CDK5RAP1
KLHL20
MIER1
RARS1
RALBP1
TMEM205
CCDC159
NDUFAB1
SHF
IBA57
RAB3D
CYP2R1
C4orf48
NLRX1
ANGEL2
ERCC4
TLL2
GGCX
MICALL2
FETUB
FRMPD1
CYP4B1
ZRANB2
ZNF771
ERMP1
ZBTB26
ZNF562
MRPS31
ZNF554
ZNRF4
MSL2
CRBN
CYB561D1
SPATA18
YWHAZ
BTG1
TESPA1
NOMO3
NOMO2
ZFYVE19
DNAJC17
SMPDL3B
TMEM210
LRRC26
PPIG
SNX17
EIF2B4
PRPF18
POLG
NOTCH2NLC
ZNF484
CELF1
ARHGAP22
RABIF
L3HYPDH
JKAMP
ACO1
STK10
CASQ1
TSNARE1
BARX2
PKD1L1
COX16
FRA10AC1
ALG10
CASC3
FBXW7
DPP8
PPP1R8
ZNF326
DISC1
BACH2
C3orf80
METTL21C
ASL
ZNF530
ISM2
SPATA22
IGIP
BAIAP2
NOP16
HIGD2A
NDUFC2-KCTD14
NDUFC2
TMEM106B
NUDT7
VPS4A
FAM50B
ARAP1
TIMM9
KIAA0586
NUP214
PDAP1
BUD31
RABGEF1
VPS28
RAB3C
ADRA1A
GINM1
DUSP4
SCOC
TTC4
ZNF441
MRPL34
PSMA1
WDR70
RBL1
ABHD8
DDA1
ZNF219
PTBP2
C11orf80
LRRC37B
TMEM253
GPCPD1
CTSH
SORL1
DOP1B
ARHGAP28
MT1B
CFHR4
CANT1
PRKAG2
COIL
CEP126
ANGPTL5
CASP8
TCAIM
MRPS22
TMEM14A
RNF135
SPCS1
GLT8D1
HSPB1
GPAT3
ZDHHC3
EDARADD
RAMP3
MALL
SALL3
CALCB
STAT3
ZNF383
FOXN1
TIGD1
EIF4E2
NANOGP8
ZNF839
ATG16L1
JRK
KANSL1
ZGRF1
LARP7
C19orf53
ZNF77
XRN1
GUF1
SLC26A9
RANBP3
HHLA2
DNAAF4
RHBDL2
CLTB
MRPS14
MAGOH
C11orf86
U2SURP
OGT
EDC4
CRB1
CNOT6
GDPD1
GSTO2
MIA2
YJU2
RMND1
ARMT1
ZNF609
POLM
DPH2
UCHL3
COMMD6
TUBB
MDC1
ZZZ3
ZC3H6
FSIP2
ITM2C
ACAD9
VAT1L
BPI
KIAA1217
SNAP47
JMJD4
NUP54
DDX18
CRKL
CBWD5
UCHL5
RO60
LINGO1
TRIM7
TSC22D4
NYAP1
TBRG4
COX10
WASHC2C
HDAC11
RBM17
FAM47E
KIF11
PAG1
FAM47E-STBD1
ZKSCAN1
HEATR3
CREG1
SELENOH
NUP107
ARHGEF12
ZBED9
PKIB
ZNHIT3
NOTCH2
RPL10A
SEMA6A
CYP20A1
FOXRED2
NUFIP2