ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

ZNF550
CSHL1
GH1
FKBP9
RAB37
SMCO1
SMYD3
ZSCAN32
ZNF174
LIMK2
KRBA1
KCNJ15
UBC
MTRNR2L8
NUF2
TTLL1
ARHGAP45
ABCC9
ZSCAN31
ZNF91
CCDC130
BTBD8
MID2
ZNF761
HECW2
RERE
PRSS38
DUX4
OBSCN
ZWINT
LOC102724265
TTLL12
MSH3
DHFR
MTRNR2L2
MMEL1
ZNF514
DCP1A
PDP1
GBA
FAM184A
NEMF
JDP2
BSDC1
ITGB3BP
EFCAB7
ZBTB26
RABGAP1
NPAS4
HTR5A
GABARAPL1
FRG2
FBXO33
SLC28A2
LCE3B
LCE3A
MTRNR2L1
SLC24A1
INTS14
SLC44A1
DIO2
DEFA6
EIF4A3
CADM3
TEKT5
STX16
NXPE4
PCDH1
DRG2
PARP15
ST20-MTHFS
CXCR2
SGPP1
RGS18
GPR35
ZNF623
APOC3
APOA1
ZNF662
CLDN18
GLT6D1
HLA-DRB1
HTN1
TSC22D3
NCBP2L
CCL24
CYB5R4
LOC102724770
DGCR6
LDHD
KRTDAP
KIF5C
FMO4
PAX4
PTPRN2
TBC1D2B
ZNF24
SNX20
COMMD2
ZFP30
ZNF708
ZNF76
DBNDD2
GCNT7
FAM209A
DIP2B
UGT1A10
FAM167A
FAM207A
RNF217
MTNR1B
ERCC4
IFIT1B
ZNF317
TMEM229B
PRR25
GNG13
CHTF18
RPUSD1
NWD1
ZNF134
PEX3
ADAT2
SLC36A2
ZNF613
TRIM9
GNAL
YTHDC2
GPD1L
GTF2H2C_2
GTF2H2
CRP
NOX5
MRPL35
IMMT
PADI4
POU2F1
POLE4
ZNF222
CADPS
CDT1
ZNF670
APRT
DNAH14
OR2A12
MTF2
ZNF169
SUB1
RTP5
ZNF594
EIF2D
RMND5B
N4BP3
FAM227B
DTWD1
RAD54L2
IER3IP1
C1orf100
WDR33
CITED4
SLC44A2
MST1R
C2orf88
SAP130
DOCK7
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
VWA5B2
CHST3
WDR11
TLE7
FRG2C
GALK2
COPS2
ZNF230
SAMD4B
GMFG
GTPBP4
ZNF34
ZNF433
IRAG2
ZNF324B
ZNF132
ATP1A1
RAX2
MATK
PRDX6
CDHR1
DNAJC22
SSBP1
FAM72C
SLAMF9
INTS5
GANAB
PRIM1
HSD17B6
PRAMEF1
ZNF77
CPNE5
RBBP5
PDE7B
ACYP2
TRIP4
PCLAF
SF3A3
SMIM17
CTAG1B
CTAG1A
CNGA3
CHIT1
RHOT1
ANP32D
ZNF501
CLEC4M
CD209
ZNF502
PIP
ATAD3A
ZBTB8B
CPT2
CRLF2
ZZEF1
CYB5D2
TPM1
SCRT2
ATP5MC2
STX6
EXOC6
PSMF1
DEFB4A
LMTK2
INTS12
GSTCD
TM9SF1
IPO4
DOCK3
NSFL1C
TEX38
ATPAF1
PLIN1
WDR93
PEX11A
FGD3
TMPRSS12
ALG10B
USHBP1
BABAM1
PGBD2
BTBD16
COL23A1
NDUFS7
NRF1
STX18
ATP5F1B
DNAJC25-GNG10
DNAJC25
SPACA3
ACP6
DCAF10
SPINK8
CCNC
MFAP3L
TIAM1
MRPL16
UIMC1
FUT8
ZNF488
MYLK
TRIM29
SRGAP2B
FAM72D
ZNFX1
B3GALT2
PDE11A
GTF2H2C
PRKCZ
EPB41L4B
SRRM3
DRAM1
ARID3A
UQCRC1
TMEM89
JMJD1C
REEP3
MKRN2OS
MKRN2
B3GNT9
TRADD
HSF4
FBXL8
FAM180B
NDUFS3
KBTBD4
GABPB2
ELF3
SLC27A5
IGFALS
TMED1
ZBTB45
ZNF205
BCR
PAXBP1
DHRS2
HMGB1
USPL1
MRPL3
VMO1
PSMB6
GLTPD2
PRMT5
MRPL22
GEMIN5
LRP11
RPL27
IFI35
NTSR2
LPIN1
RNF24
FAM178B
DEGS2
DPY19L4
SPRR2F
ANKRD40
WDFY1
SRGAP2
FAM72A
AURKAIP1
TACO1
WDFY4
VPS13D
NT5C3A
FGL2
S100P
DMAP1
B4GALT7
TMED9
TVP23B
AKIRIN1
TPBGL
LOC388282
TMEM41A
TRAM1
BARHL1
NCOA4
P3H3
GNB3
MSMB
LEP
TIMELESS
USP30
PCP4L1
FBXO17
CCL7
CCL11
OR10G2
ZNF436
MED23
ENPP3
LRRC59
GGH
RPS29
NFAT5
SLC39A13
TSPAN14
SEC22B
RGPD6
RGPD8
RGPD5
EXD2
SEC13
LRRC37A3
ZNF75D
EEF2K
DSTYK
FOXO1
ANGPTL4
LTK
ZER1
WDR36
FSHB
RBBP8NL
C10orf88
TMEM250
BCL9
BRSK2
STAT1
HDHD5
KRTAP10-12
BCAR3
TCF7L2
HMOX1
TSNAX
CCDC187
KMT2A
ATR
MTHFD2L
GRM4
AKAP13
AKNA
CREG2
CHAD
RHOT2
RHBDL1
POLR2C
AADAC
RGPD2
RGPD1
CYP4X1
BFSP2
PRELID3B
PPA2
DYNC1LI2
B4GALNT4
TATDN3
NSL1
MNAT1
RPS14
ST6GALNAC6
CCDC150
DUSP6
SCMH1
FMN1
DENND11
MKLN1
TACC1
ACAA2
DCLRE1B
AP4B1
ZNF697
SRGAP2C
FAM72B
TBC1D22A
ISM1
GTPBP6
SNX11
CBX1
CDC73
HUS1
GNB2
CFAP73
MFAP3
FAM114A2
EVL
ZNHIT6
PRRG2
NOSIP
AQR
ANO6
LRRC10B
CDK5RAP2
EPS8
ANKRD46
DHX8
FAM102A
LAMA5
ZNF829
ZNF568
OPA1
TMEM259
CNN2
PDE4C
SPSB1
CPA2
PPFIBP2
ELK3
SNRPB
NEUROD4
HERC3
PYURF
PIGY
ABRA
LUC7L2
FMC1-LUC7L2
FMC1
MRPL44
EIF3F
CEP135
TCF3
DLG2
LHX6
SLC33A1
TOR1AIP2
TOR1AIP1
GRPEL2
ADAM15
TLE2
TLE5
REXO4
ADAMTS13
YPEL1
SV2A
SF3B4
CYP2C9
TMA16
TFF1
TFF2
ZNF226
PDP2
ZNF354B
EGFLAM
FRG1
DUS1L
ANGPTL6
SHFL
COX6A1
MDM4
TEFM
TSEN15
CCSER2
TNFRSF13B
GPIHBP1
TMEM161A
PPP6R1
EPRS1
TUBGCP3
SPATC1L
DYNC1I1
CRLF3
ATAD5
MAPK1IP1L
RNF168
TRIM16L
C16orf89
ALG1
MCPH1
ZNF527
SAMD7
DAG1
IL10RB
SNAPIN
GBP7
ZNF394
SCAMP2
CALM1
MPI
CABIN1
CCDC152
DHTKD1
PTPRH
CPLX2
BUB1B
CBX5
HNRNPA1
IQSEC3
SMARCD2
FAM53A
TMEM39B
COX5A
TAFA2
LRP2BP
NUAK2
DRAP1
C11orf68
RRP15
FUT10
PPARD
CYREN
TDRD9
ATP5MPL
CHD1L
PRKAB2
STX1A
TJP3
TOPAZ1
AMBP
IRAK2
POLR2J3
FAM131B
GTF2A1L
PRRC2B
FXN
CD86
PHKG1
C2orf66
GTF3C3
CLUAP1
C16orf90
OR2F1
C13orf46
TOP3B
IRF9
SIKE1
DCAF7
NOD2
CLEC19A
LCE4A
C1orf68
SCCPDH
ZNF263
CCDC88B
WWOX
USP54
CLK3
TNFAIP3
ZNF621
FECH
NFKB2
VSIG10L
NDST2
UBE2F
KRTAP10-7
TRMT61B
FHL3
UTP11
KRTAP10-6
IMPA2
XKR8
RNF149
FAF1
CEP72
AGK
CDKN2C
NKAIN4
CAPN2
TMEM242
NCOA7
ALKBH3
VPS13B
ZNF438
LAMP1
FAR1
ZMIZ2
TMPRSS11F
RPS7
BRF2
TTC26
SDHAF3
EP400
ALDH3A1
ZNF124
C10orf95
C9orf152
USP17L7
FAM228B
TP53I3
SF3B6
NPR3
PNPO
ATP2C1
ANXA11
CSAD
ZNF740
PRR15L
IGSF9
PDCD7
IMP4
CCDC115
ZNF286A
COQ10A
ANKRD52
ALAS1
PATL2
C19orf18
TTC32
TDP2
ACOT13
SLC25A51
FAM98B
DDX1
SIT1
CCDC107
ARHGEF39
LARS2
CERS3
PLEC
SNTG2
NRARP
VARS2
GTF2H4
ZNF557
TBCD
ZNF197
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
LPCAT4
TBC1D3J
ARHGAP40
STK39
UBA52
CIAO3
DPH6
HPCAL4
CLIC3
ZBTB44
INO80C
ZSCAN22
CCAR2
C8orf58
GLIPR1L1
CAPS2
ANKRD36
FNTB
NRG3
DBX1
NAP1L4
RPL37
CARD6
DISP1
NMNAT1
LZIC
DHX32
TBC1D30
C5orf49
TDRD7
B3GLCT
FRAT1
AQP4
CHAC1
ASIC2
CLDN8
PPIP5K2
GIN1
NPR1
ILF2
FAM71E1
ADRM1
SLC27A3
MRPL38
EMC10
TRIM65
MKNK2
EDF1
EPB41
CTNNB1
MGST3
NOXO1
RPS2
RNF151
TBL3
SLC35G4
PDS5A
SCARF1
RILP
BLOC1S5
MED12L
MYO9B
HAUS8
PHPT1
MAMDC4
CARMIL2
TNFAIP2
C14orf180
TSKU
NME1-NME2
NME1
ZNF350
IL36B
C8orf37
IL36RN
YIPF2
TIMM29
CACNA1S
ASCL5
STRBP
MRPL55
TMEM43
CHCHD4
ZNF410
JOSD2
ASPDH
CXCL6
LTB4R
LTB4R2
CIDEB
SRD5A1
UCKL1
AP3S2
WDR70
NUP155
ABCA3
ANKRD2
SMG6
RNF7
OR13G1
HOGA1
OR4K17
FAAH
SESN1
BSPRY
CEP57L1
CGGBP1
C3orf38
B3GAT2
DNAAF2
AGR3
C10orf143
PXDNL
LUC7L
FAM234A
DEFB4B
FZD1
RPL6
PTPN11
SAYSD1
NUDT19
AARS2
TMEM222
TIPARP
DGKA
ASB6
RAPH1
PYM1
ACKR3
DPH3P1
ADAM22
WIZ
NAA60
FAM162A
CCDC58
SYT3
TMEM68
TGS1
TPR
ODR4
ENSA
KRTAP12-2
FPR3
PAX8
KRTAP12-3
PNMA3
TBC1D19
SEM1
TUT1
MTA2
HSPE1-MOB4
HSPE1
HSPD1
SNRPB2
COG2
SELENOT
GUK1
SFT2D2
USP22
KRTAP5-6
ZNF66
TGFBR3L
SNAPC2
CTXN1
RASSF8
CASZ1
CRISP1
NDUFB3
FAM126B
MRPS14
SLC39A3
FLYWCH2
KMT2C
SQSTM1
MGAT4B
UBE3C
SBNO2
BTN3A3
KANSL3
FER1L5
FAM133B
CLN6
GCFC2
ZMAT2
HARS2
HARS1
PLK1
BPTF
UGT2B4
ZNF555
UTP3
CPPED1
CCDC174
TSPAN10
NPLOC4
DNAJC11
RSAD1
CCDC33
KDM3B
TMEM248
EPN1
TMCO1
RASA2
CLEC3B
NSUN3
DHFR2
ADPRHL1
SNX18
CACNA1E
C8orf74
SNRPE
CYP51A1
CRNKL1
CFAP61
TBPL1
FOXN3
UCP3
PSEN2
ARHGEF28
ZNF891
ZNF10
POLR2J2
PUM1
PCBP3
PTPN4
SNX19
DPH7
POLR2H
SMPD2
PPIL6
ZNF721
PIGG
SCIMP
MT1X
P2RY2
TLCD5
THPO
CHRD
CFAP45
ZNF572
ZNF491
ZNF440
AFAP1L1
AASDH
HMGN4
NCF4
DIXDC1
CRYAB
C11orf52
CASKIN1
HSPB2
PGP
MLST8
BRICD5
CLDN19
CNNM3
FAM219B
FRMD5
MAPRE2
ZNF443
BNIP1
ABL1
POLR3E
PLIN3
DGKZ
CCDC69
GALNT10
CD55
RALGDS
OR2T1
CITED2
DUOXA2
DUOXA1
DUOX2
CASTOR1
CAMKK1
SGSM3
CPNE6
RSU1
SLTM
ZNF331
ZNF354C
PCARE
ZNF619
AGPAT2
RBBP9
GTPBP3
ANO8
CRH
KNL1
ACOT7
PET117
KAT14
ATXN2L
DLC1
WDR41
ZNF529
C7orf25
RNF11
POGK
P2RY11
EIF3G
TET3
SLC37A4
SIGIRR
BIN1
MAD1L1
TRMT5
SLC38A6
DHX16
DDX46
ICMT
HES3
DIRAS1
LAG3
NUDT1
MRM2
BCL3
SRCIN1
GPATCH4
NAXE
SAMD11
KRT3