ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748853 | Adenoid cystic carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◣ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

COL23A1
KIF5C
DUX4
FAM236B
FAM236A
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
EPN1
RGPD2
RGPD1
CDH11
MAMDC2
FRG2C
UGT1A4
UGT1A3
PTPRN2
LRRC6
IFIT3
SPAAR
HRCT1
OTUD6B
DLG2
GTPBP6
LOC105378979
ARID1B
FXYD3
CYP4F11
OR2T1
MUC3A
SNAPC1
FRG2
DRD4
CCDC200
GALR1
FAM163B
MTRNR2L10
LRIG2
COL6A2
MRPL23
MMP8
CRYAA
CRYAA2
PXYLP1
RGS19
OPRL1
LKAAEAR1
CSNK1D
HNF4A
RPEL1
ZNF407
RBFOX3
GRK1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
TAOK3
SUDS3
RWDD1
DYNC1LI2
NUP85
PSMG2
CEP76
VDAC2
HSPA9
FAM187A
EFTUD2
CCDC103
NVL
VTI1B
NUP205
POLR2E
GPX4
RPL21
TBCK
AIMP1
S1PR4
NCLN
GOSR2
MRPS7
MIF4GD
GGA3
DCTN1
C19orf48
ATP5MG
STAM2
EXOSC5
BCKDHA
REXO1
ZNF503
STAM
SRD5A1
SKP1
HADHB
HADHA
TSNAX
FARSB
SEC61B
ALG2
NNAT
BLCAP
TSN
LYRM4
FARS2
UPF2
PES1
ZNF576
IRGQ
SLC35B1
ACTR10
NDUFA4
PNO1
PAK1IP1
C6orf52
CAPRIN1
DPH6
TTC8
PSMD12
LOC102724770
DGCR6
COX7A2L
GOLGA5
SUPV3L1
RBBP5
VARS1
SART3
ISCU
RPS23
ATP6AP1L
TMED1
MRPS5
RBKS
BABAM2
ZRANB2
RPL35A
IQCG
PI4KB
SMC2
ANAPC7
LMLN
PDAP1
BUD31
SFI1
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
NEUROG2
USP1
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
DNAJB7
RPS12
PROSER1
NHLRC3
HSPA1B
SF3B3
COG4
RPS27A
CLHC1
PIP4P1
TM9SF1
IPO4
NEUROG3
OSGEP
APEX1
C6orf47
BAG6
APOM
TSSK4
COMMD1
CCT4
PAF1
PPP1R1B
HES1
WNT1
DUSP29
ARF1
PTGES2
PDE6B
ICMT
HES3
ZNF608
MBTPS1
NFKBIL1
DDX39B
ATP6V1G2
CDX2
UBE2I
RPS29
LRR1
LARP7
PIN4
FZD8
ARHGAP10
HOXA3
OR6B2
NDUFA10
VEZT
FGD6
G6PC2
ARHGAP11A-SCG5
ARHGAP11A
HOXA4
PMAIP1
MRTO4
EMC1
HOXA1
HOXA2
TAF9
RAD17
AK6
ZP4
SUCLG1
NR2F1
SERINC5
ATOH1
NEUROG1
BICRA
PALM2AKAP2
PLAGL1
STK36
RNF25
EIF2S3
SEC11C
GLRA1
RPL7
RDH10
RAB11FIP1
ZGPAT
ARFRP1
BNIP3
PDE12
LBX1
IGFBP2
SKIL
LZTS1
NEUROD1
GADD45GIP1
DUSP6
OAZ3
MRPL9
ID2
RARB
CCDC33
INSM1
BBS9
LEFTY2
ETS1
NHS
ZFHX4
ADNP2
ARID3C
TPM1
S100A10
RHBDD3
EWSR1
UNKL
URM1
CNPY2
GTF3C4
DDX31
HOXB3
DCTN3
CALCOCO1
SOAT2
IGFBP6
PCBD2
DAPL1
FXYD2
MUC20
TLE2
CDCA7L
PDHX
APIP
C16orf91
CDC73
ITGB6
RPN1
HOXB1
DLL4
PHOX2B
SP2
TMEM120B
ANKLE2
UNCX
DDAH1
CCN1
ST18
DLX4
PDHB
ZNF585B
ZNF383
GORAB
PRUNE2
SYBU
CITED2
PRRX1
ID3
RARA
MSX1
FABP7
TLE4
ECEL1
SP5
TPRA1
MCM2
CERCAM
MYLK4
RBPJ
ARID3B
FOXP2
TMEM107
ANK2
FGF19
NOTCH2
MAB21L2
NFE2
ASXL3
LRATD2
CDH18
NAV3
KDM2B
TLE3
ZNF746
HOXC6
CLGN
ME3
FAM222A
ID1
KCNN4
MEIS2
CNTN1
GATA4
RGS12
GPR108
TMEM70
ELOC
FOXP1
MALRD1
CBFA2T2
MYRIP
PAH
ASCL1
ALKBH5
TRIM65
MRPL38
DSCAML1
NFIA
ERRFI1
RBBP7
TRIP10
SMPDL3A
METTL24
GADD45G
HOXC4
MRPL3
CCNDBP1
POP5
GRSF1
IL23R
HOXB4
DMBX1
RIMKLB
IL17RD
KAZALD1
ARSG
KDM8
PDE4DIP
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
EXOC2
PPFIBP2
USP17L21
USP17L20
USP17L12
RUNX1T1
CR1L
SPATC1L
CYP26A1
NCOA7
LAMA4
PAX6
MSX2
USP17L22
DMRT3
PRDM12
RPL34
TRABD2B
HOXA5
KMT2A
HOXD3
MRPL34
DDA1
ABHD8
OTX1
TBX3
HOXC5
FRMD7
ZNF652
SH3BP2
BFSP1
RASSF2
IFI16
IER3
FLOT1
LPIN1
PARP11
EVA1A
NDUFS7
SH2B1
INAFM2
BRINP1
NEK3
TCF7L2
RFX2
SPCS1
GLT8D1
FGR
PYDC5
PKDCC
METTL3
SH3BP1
ALDH1A2
PLEKHO2
TMPPE
MBD2
GLB1
CBX4
DHRS3
FKBP1A
ARHGAP24
DBX1
CACNA1D
AXDND1
RNF149
PDP2
TMEM14A
UPF3A
SCGB1A1
SULF1
CS
ERLIN2
METTL11B
PSMB5
ABLIM3
TAF12
OR10AC1
LYL1
C5orf63
HIP1
PRDM6
MVB12A
RPS10-NUDT3
RPS10
KDM6B
KAT6B
VOPP1
HNRNPA2B1
CBX3
SPG7
HUS1
CMTM7
HEXIM2
PHC2
PANK4
HES5
GTF3A
ETFBKMT
ARID5A
TESC
LIN28A
RPS24
POLR3A
NELFA
ABCG2
SRSF11
LRRC40
TLE1
TMEM212
SEC14L1
RAI14
NEO1
STK38
EAPP
ZFHX3
KCNAB2
JAK3
PDZRN3
HSPA1L
HSPA1A
NUTM2D
TBC1D10C
PPP1CA
CADM3
PARK7
MYBPC3
CCPG1
C15orf65
TDG
C12orf73
FBXL18
VIP
TIGD1
EIF4E2
HNRNPD
CHODL
FRAT2
RPS6KA1
SMC6
NOXO1
GEN1
SASH3
NRROS
C11orf24
MRS2
PNKD
EMP3
SLCO4C1
RPLP1
ATG16L2
NR1D1
USP17L13
SNCG
MMRN2
KMT2E
KIF21B
HOXD4
NCOR2
KDM3A
GRHL3
PRDM10
SLC7A5
UBXN10
PLA2G2C
TBC1D8
MBNL3
ERCC1
RASA4
PAX8
CCDC88A
SPECC1
RASL12
KBTBD13
LYPD1
BRWD1
ARHGEF10L
NADK
CATSPERG
ACTB
IER3IP1
POR
CARNS1
LMO4
NCOA2
SALL2
FGFRL1
IRF2BP2
DGKZ
PAX3
ENO1
WDR6
KLF17
HAND1
FOXB1
COL17A1
NBEAL2
CCDC12
BIN2
PSTPIP1
SNX1
CIAO2A
SKIV2L
NELFE
AMD1
SIRT4
NKD1
ING1
CARS2
ZSWIM6
EFHD2
FAM110A
CPSF4L
KITLG
MEOX1
OTUD7B
ADM
USP17L11
TMEM104
NAT9
ATP23
TBL2
LPCAT3
MTMR4
CLDN11
MAGEA11
REV3L
CAND1
SHOX2
RSRC1
RASA4B
STIL
DIAPH1
NBPF1
USP17L18
SMURF1
CCDC114
NEK7
GGCT
CD79A
ZNF76
ZNF775
TRAF4
PLEC
CCDC102A
SLC39A7
RXRB
HSD17B8
MEF2C
CAMTA1
USP15
SNX3
LRRN4
WNT10B
RARG
AHNAK
MEF2D
ZNF740
CSAD
ACSS3
NEBL
NRXN2
HOXC8
VAV1
SH2D3A
KHDRBS1
SOX21
MXI1
SLC2A9
USP17L10
LNPEP
CABIN1
PPP1R18
NRM
BHLHE40
RASSF5
CDC42EP3
TMEM242
DENND2D
CCDC174
ZNF367
DIAPH3
DDX3X
CNOT2
REC8
IMPG1
POLD2
IRX5
LIG3
CBFA2T3
GATA6
RPL17-C18orf32
RPL17
ZCCHC3
CCKAR
C20orf96
ASB6
MNT
NFKBIA
IQCH
DMD
CRABP2
AAGAB
TYRO3
TTC13
RXRA
ZNF414
LDLRAP1
ZFYVE28
CFAP99
ZDHHC1
CD38
INAVA
BCL3
CPVL
CHN2
BNC2
SKI
HEBP2
TRERF1
CMTR1
TPST2
HOXB5
TUBB
RAC2
MDC1
DTX4
LRIG3
FTL
PCNA
IQGAP2
TUBA1C
LFNG
CDS2
SYNPO
POLR2J3
SPACA1
GPAA1
EXOSC4
RNASEH2B
LRIG1
MINDY2
SCAMP4
NDRG1
ADAT3
SMARCA2
MYO1G
NTRK2
CREB5
DIPK1B
SLC38A10
PKN2
OPA3
DCSTAMP
PKM
LOC102724265
CLDN2
AQP6
MYO1B
H6PD
PPIB
PTK2B
PDPN
DISP2
ARHGEF1
TNFRSF19
RAB11B
ADGRL2
NDFIP2
KBTBD11
MAPKAPK3
CISH
KCNIP4
RYBP
H2BU1
H2AW
GUCY1A1
COL11A2
ADGRG5
SHB
CDX1
ANKRD1
SMARCD2
SMAD3
GALNT10
FOXA2
AGTRAP
PLCB2
CDK5R1
SEPTIN4
BAX
USP3
NKIRAS1
GFI1
BST2
ERI3
MYO1F
PDE4D
ADCY7
RPL22
RNF207
PCTP
NAA80
IFRD2
HYAL3
PEX14
KCNH2
DFFA
TMEM275
YTHDF2
FAM120B
CEP41
HMGCS1
PRDM1
NAA10
ARHGAP4
CYP51A1
CLDN9
EVX1
PPCDC
ZNF397
LRCH4
FBXO24
ELANE
CFD
MRPS24
THRAP3
SLC35E2B
HESX1
PPP1R1A
NOTUM
TBRG4
ADORA2A
HIBADH
CYP2E1
CCND3
RABGAP1L
NDUFV1
ARIH2
TXNRD1
TUBB3
NR1D2
MC1R
RNF139
SH3TC1
HNRNPF
TMEM9
STAT1
EVX2
CYCS
TAF15
ZDHHC4
C1orf105
GSPT1
RNF166
CTU2
DGAT2
IGF2BP3
CNTN4
SYTL1
SYTL3
CRYBG1
SP7
BNIP2
DYNLL1
NECTIN1
B3GALT5
MECOM
MAGIX
BAIAP2
SOD2
PIK3AP1
KANSL3
FER1L5
SBF1
CDC42EP2
ARID2
SCNN1A
LTBR
DPP9
RNPEPL1
DUSP28
ANKMY1
MDFIC
CLIC4
PTP4A2
SEMA6D
NR2C1
LAT2
CPT1A
ABHD17A
KCTD6
ZBTB25
ZBTB1
AKIRIN1
IL6R
PRSS56
CHRND
SEC22B
KIF26A
DHX16
DTNB
TTI2
SP1
ATXN1L
SLC35E2A
CYTH4
AGO1
MYEOV
FOS
PTGES3
LRGUK
ZFX
RBL2
FAM118A
HNF1A
SRPRA
GAS7
FCHSD2
MBD6
DDIT3
TMEM222
SSX2IP
RND3
HHIP
VGLL4
PCDH11Y
SMUG1
FAF2
NXPH4
C12orf50
C12orf29
ZNF3
COPS6
WT1
CXXC4
SOCS3
SMIM3
ARMC12
UPP1
CASC3
CALM2
ZNF341
CD164
CTTN
SLC39A13
SLAMF8
ELMO1
LIX1
TYROBP
NFKBID
HCST
ANKRD13D
SLC25A6
TRMT6
SEBOX
MCM8
TBX2
RNF103-CHMP3
RMND5A
AHDC1
CSRNP1
SNAPC3
USP17L17
H2BC17
H2AC17
BAZ1B
ZSWIM1
SPATA25
NEURL2
CTSA
KLHL7
RHBDF2
EFNB2
LAPTM5
PRRC2A
AIF1
USP42
DOT1L
SHC1
NR4A2
MYADM
NOTCH2NLB
NOTCH2NLA
EIF1B
UNC13D
STX18
SLC3A2
CD151
SLC10A2
SBNO2
CLTC
SEMA4D
PIP4P2
ARHGAP45
ASB1
MAP2K1
VANGL2
NMNAT1
LZIC
CECR2
MAD1L1
SYNGR4
SYNJ2
MIER1
DNAI4
ZNRD2
MTF2