ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

MTRNR2L2
SPAG8
MTRNR2L8
CDK12
STOML2
PIGO
TBC1D4
CCDC107
MED23
UBE2F
PSMB6
PEX3
ADAT2
VPS37D
PTPRF
ARHGEF1
ZBTB40
CLTA
RPS7
TRIP4
RGPD2
RGPD1
HRCT1
RNF216
INTS12
GSTCD
DMAP1
ATP5MC3
TESK1
MRFAP1L1
UTP25
KDM1A
RPL27
ZDHHC5
H4C3
COMMD2
AKIRIN2
UBE2L3
POLR1H
PAXX
AURKAIP1
RUSC2
GTF3C3
TOMM7
AHCY
RMND1
ARMT1
NFE2L2
NLRX1
TLN1
CREB3
SIRT5
AP2A2
LRRC37A3
ARL14EP
SSBP1
TOP3B
CLPB
GNE
DNAJC19
ZCCHC4
PDCL
PHKB
ITFG1
PSMF1
TSSC4
CYRIB
IL11RA
ELP3
UBE2V2
GTF2H4
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
FAF1
SNRPB2
TRAPPC9
ARHGEF39
ZFAND1
COX7A2
CIZ1
OSCAR
NDUFA3
NCOA5
ATR
NDUFS7
TENT2
EIF3E
ZNF335
MRFAP1
EPRS1
RBBP5
C9orf131
MRPS14
MRPL45
RNF24
DPY19L4
ZSCAN9
UBFD1
EARS2
NR6A1
TBC1D19
KIF3B
WDR43
WDR74
DYM
SPHK2
RPL18
CABLES2
GBA
GPCPD1
SMG5
NPR2
RGP1
GBA2
GTF2H2
GTF2H2C
ENGASE
MRPL58
ERCC6L2
SLC35B1
PANK3
PRDX1
CTNNBL1
PPP5D1
CALM3
MTERF1
AP1G1
ZER1
CRLS1
PRMT1
AARS2
STX16
TACO1
DSTYK
INKA2
DDX20
FBXW5
C8G
RPS14
FANCG
SF3A3
FAM8A1
PLEKHM3
ZMAT2
HIBCH
PAXBP1
MELK
RAC1
REXO4
PGS1
MTF2
VCP
EIF4A2
HEATR3
DPH5
AMZ2
CASC3
PRPSAP1
RAD52
EIF1AD
BANF1
TMEM242
COMMD6
AP3S2
NFX1
CDK5RAP1
LOC730098
UNC13B
EDC4
TPM2
CDC25B
RPL38
DNM2
DRG2
DDX18
RIN2
NOTCH2
SNAP47
JMJD4
ZMPSTE24
CCNC
UIMC1
ADNP
HINT2
EIF3D
RRP15
FBXW2
MRPL35
MRPL39
NDUFC2-KCTD14
NDUFC2
TFB1M
EIF3F
MEX3C
MRPL38
POLG2
RECK
CCDC88A
PIH1D1
PPIL3
NIF3L1
ZDHHC24
ACTN3
MVB12A
ZNF638
FOXK2
NDUFAF4
KLHL32
ZKSCAN2
MITD1
ZNF165
ZBTB3
MRPL12
ASXL1
TMEM222
SMARCD2
EED
YTHDF2
HIF1AN
SMU1
MRPL44
STAT3
RPL37
ZSCAN16
PLEKHG2
ATF2
NOL11
MRPL3
NOTCH2NLC
SP2
FKTN
PDCL3
KCTD2
ATP5PD
PAFAH2
PDCD6
RFC5
ZNHIT6
WDR70
NMNAT1
LZIC
GORASP2
TIMM9
KIAA0586
PCCA
ZNF8
NUTM1
NOP10
MRPL15
FXN
NUDT9
UBE4A
RNFT1
MDM4
POLR2M
P3H4
FKBP10
H4C11
SH2B1
LUC7L2
SMCO4
DOT1L
UCHL3
PRELID2
SNRPE
TXNDC11
TANK
CARD14
ZNF461
MSL2
C8orf37
LMAN2
COPS7A
DCP1A
RPL10A
VPS25
RBIS
LRRC59
FAM227B
DTWD1
KXD1
HLA-E
C19orf25
ALDH16A1
ADRM1
NUCKS1
NEURL4
ZDHHC12
RFX1
TOR1A
MLLT1
NPAS4
SRRD
HPS4
SLC29A3
SOGA1
SETD1A
ATG16L1
SPATA2
SGSM1
DLAT
TAF1C
EPS15
TKT
TRMT1
TIA1
UBOX5
FASTKD5
XKR8
CACTIN
ARNT
COASY
PDE4A
CLPP
TCF3
ZCCHC14
TJP3
UNC93B1
MCC
METTL14
PREB
MATR3
CEP164
PDSS2
SLC25A16
MEGF9
RPL6
KDM3B
FMC1-LUC7L2
SPATC1L
GRSF1
SNU13
SMG8
LSM14B
MTRNR2L9
ZNF184
FKBPL
NUP85
SLC25A25
NAIF1
EIF3C
PAK4
ICMT
CCNT1
LTO1
HPS6
GADD45B
CHST12
SLC35A4
APBB3
TERF2
ATG4C
SCAMP4
ADAT3
PTK2B
HAX1
CNOT11
SLC38A10
SLC30A6
ZNF77
DAGLB
TCTN3
CLUAP1
WDR59
LARP1
ZNF131
GSTA4
NAE1
SLC44A1
LGR6
PTPN1
SARS2
NUF2
MRPS12
RBM4B
MKNK2
HUS1
VPS13B
EFR3A
KANSL3
CDK8
PPP1R13L
PSMD4
RAB14
GSN
DYNC2I1
CWF19L2
ISOC2
PKD2L2
LDLRAP1
TDRD7
AARSD1
RPL36
MAPK14
EIF3CL
ADPRHL1
SLC31A1
PDLIM7
FKBP15
TBX6
MRPL54
APBA3
MEGF8
PCCB
SRXN1
PPP6C
MTOR
SRPK1
CLK3
ILF2
GABARAPL1
SPC24
TPK1
SWSAP1
WASF2
ZSCAN25
RAB4B
RAB11B
RNF213
MTBP
MRPL13
GRK1
COPS4
GLIPR1L2
CCDC22
UBXN4
HPS1
RIF1
TGFB1I1
GTF2H5
AP2S1
SYMPK
LAPTM5
FOXA3
DCAF7
GHITM
ZZEF1
CYB5D2
CIAO3
SPAG4
CBX4
TIMM10
ZNF234
RAB5B
ZNF555
PGK1
KIF16B
NELFCD
GGCX
TIGD1
RAB5C
EIF4E2
TRIM26
ZC3H15
USP35
KCTD21
SLC27A4
ZNF606
SORBS1
PITPNA
RNF187
NACC1
EMC4
MRI1
VPS37C
RAB2A
DPP3
ATF6
SNX16
SYT11
GON4L
DMAC2
ASMTL
VKORC1
DOLPP1
AP3B1
TSEN54
TMEM41A
CASKIN2
RBM45
MTRNR2L10
SCFD1
PCBD2
NICN1
UTP3
BRAP
ACAD10
RCC1
PSMD9
HPD
DCT
TIMM23
ANXA2
HMGN4
SHFL
ZBTB45
SEMA4B
PPP6R1
KTN1
EMC8
COX4I1
DHX15
DENR
C17orf64
LMO7
SEC13
RCN1
ADAM19
LSM5
SBDS
NDUFS5
GABPB2
GADD45GIP1
SYT7
ST6GALNAC4
MANBAL
RPS6
ALG10B
TRAPPC3
OPA3
MAD1L1
UBE2Q1
RPL37A
MTMR14
SIRT4
COX16
SLC35E2B
TMEM214
RABGEF1
CDA
ABRAXAS2
GALNT10
KDSR
RNF114
LEO1
TFPT
PRPF31
INO80C
MDGA1
BRAT1
S1PR4
BEGAIN
NIPA2
KIF2C
PPEF1
COX5A
CHMP6
ELOVL6
SNRPC
ENSA
CIC
CYB5R4
ASF1B
PKD1L2
NCBP3
TTC38
TGDS
GPSM2
AKT2
RIOX1
EIF2D
FLOT1
SDAD1
IL1RAP
FBXL19
SMARCC2
GRPEL2
H6PD
FAM200B
TMEM161A
PRRG2
NOSIP
HIBADH
FAM168B
ARFGEF2
SLC25A20
MFSD4B
CFDP1
NCOA7
SYNGR2
STXBP3
PNPLA6
TBPL1
ST6GALNAC6
TSC1
GFI1B
NEMF
LAMP3
ZNF687
ATP5MC1
RBM12
CPNE1
TSACC
CCT3
SSBP2
TMEM51
PMM1
DPY19L1
CYLD
NME1-NME2
NME1
LPP
ZBTB43
SCML1
WIPI2
GAMT
POLR3E
H4C6
OMA1
DAB1
PTPN4
HEXB
GEMIN6
LZTS3
PRRT3
SPOCD1
GALT
RABGGTA
NDUFAB1
SLC25A44
TIMM22
YEATS2
MTR
UQCR11
MARCHF7
DEF8
USP42
ZNF572
TTC21B
PTPRA
RFX7
RPS29
RBM12B
TRIM32
ASTN2
XKR7
BRIX1
DRAM2
CEPT1
KLHL20
CERCAM
CCDC117
TMEM18
NMRK1
ERCC1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRUNE1
MINDY1
INTS5
SP1
MRPS15
AGBL3
OPA1
C16orf70
TCIRG1
NEDD1
VTA1
POU2F2
NMBR
BNIP1
TDP2
NKIRAS2
NEK6
DNAJC7
ACOT13
GPR160
CLCF1
PARG
NLRP1
ZSWIM3
ACOT8
TRMT2A
RANBP1
RPL24
USP45
MARS1
ARHGAP9
TRIM45
EIF5A
EEF1AKMT1
WDR7
CDC5L
ARHGAP24
ZFP36L1
ANKRD46
OSBP
EHD2
CTR9
COL6A1
ZNF554
SYNJ2
ADA
GTF2IRD2B
TBRG4
KLF5
CDYL
SH2D5
GTF2H2C_2
LMTK3
FPR1
MTIF2
CYREN
PGBD2
ARSD
ALKBH3
ACOT9
TOM1L2
DRC3
ASB6
ZNF408
MED18
CDK9
ARHGAP1
MAP3K10
MAP2K6
ATAD2
SEC14L1
RPN1
ROBO3
GNG7
NBN
EVI5L
ZFAND4
MTHFSD
HM13
KCTD18
C6orf226
MOSPD3
IFT46
CTPS1
ICAM1
TCP11L1
ECSIT
E2F6
XPO5
POLH
C4orf48
TFAM
IFTAP
SNUPN
MDFIC
GALNT11
DYNLRB1
INTS2
SMIM8
CDK11A
AMOTL1
VAT1
IQSEC3
PRCD
KDM4B
ATXN7L2
ZCCHC3
DST
BEND6
BANP
STX18
MRPS33
ANKRD13C
RPS20
MRPL48
RBL1
KCTD3
FUT10
GRK6
LPAR2
FLVCR1
COL18A1
POLG
PLEKHG4
PARP2
CDK11B
SH3GLB2
GTF3C5
FAM220A
TAF5
SLC12A9
EPHB4
COQ3
STARD3NL
PPAN-P2RY11
PPAN
TPP2
TBL3
RPAP1
EPOP
ADAR
SEC62
NIPA1
LSG1
ABCB8
ZNF443
TADA1
SLC66A3
SUGCT
MPLKIP
FRA10AC1
FAM133B
TUFM
SAAL1
MAD2L1BP
HEATR1
UBE3B
TCERG1
FAAP20
TRIB1
MAPK1IP1L
MAP11
SELENOH
MYO1C
SREBF2
PYCR1
BMS1
TOR1B
EIF5A2
RIPOR3
ZNF609
SPAG16
SNRPB
MBD4
IFT122
PRKAB2
CHD1L
HTR5A
DHX16
KDELR2
WDR36
ZNF582
POLI
MELTF
MRPS10
UPP1
RARS1
LITAF
ZNF343
VPS35L
TTC14
POLR2J
ETFDH
DECR1
C4orf46
KDM3A
UQCC1
MMS22L
ZC3H6
CCDC42
NES
KCNIP3
RIN1
INTS9
HMBOX1
CHST15
RPL13
CELSR3
STXBP4
POFUT1
PLAGL2
NSUN4
DIPK1B
COX11
SCAND1
RGL2
PRKAR1B
PIP5KL1
POLR1F
HSPA6
FUCA2
FAIM
CCDC43
ARHGEF16
TIMM17A
RCAN1
MUC1
FAM98B
C20orf27
PIGBOS1
PIGB
MRPS17
POLR2J3
ELAVL1
C8orf76
ITFG2
GNA13
FCHO1
COQ7
TMEM170A
HERC5
TBL1X
PPP6R3
MTFR1
PPP4R3B
CGGBP1
C3orf38
FBXW9
DTD1
ALG10
ZNF764
VARS1
PKN3
DDX1
KIAA0895
HIPK3
ANLN
TRIM59
RBM28
FAM135A
ABT1
PTK6
EFHD1
IPO13
BCAR3
B4GAT1
DUS1L
ARPC3
SNX8
SDHAF3
CPPED1
CCDC59
PIH1D2
NKAPD1
BCAS3
LY96
FAM156B
FAM156A
TIPARP
CASP4
ARL4A
TRABD
SERPINB6
GALK1
MCM7
AP4M1
ZNF577
NDUFS3
KBTBD4
CDK20
ZNF655
KLHL12
CCZ1B
TUBGCP3
CHCHD2
TRAF6
RAG1
PRDM8
SEPTIN7
DNMT1
CIPC
CORO1C
HNRNPD
ZRANB2
ZNF713
DAB2
CYP51A1
ZDHHC6
VTI1A
PRKCA
SIGMAR1
CRTC1
ZSCAN30
ZNF391
ZNF181
TNPO3
THEM4
SNRPD3
PSMD5
PSMD14
GUCD1
FGFRL1
UBE2S
CDC42
RGPD8
RGPD6
RGPD5
PGM1
MRPL21
IGHMBP2
ZNF256
TATDN1
TADA3
SLC26A11
SGSH
NUDT8
NDUFB9
BMF
ARPC4-TTLL3
ARPC4
AP3M2
TMTC3
GSDMD
CEP290
RPS11