ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140208 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◣ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L8
MTRNR2L2
RGPD2
RGPD1
MTRNR2L9
MTRNR2L10
PPP5D1
CALM3
SSBP1
TOP2A
RPAIN
NUP88
BPNT1
EPS15
INO80C
SYT7
CAPS2
KLLN
CCL3
INTS10
HNRNPUL1
MYOM2
SF3A3
SPATC1L
TOMM40L
HDAC9
ARHGEF2
TRAPPC9
TJP3
PROSER3
HSPB6
MDM2
ENPP4
CLIC5
ACTL6A
LNPEP
ATP2C1
KLF6
TMEM256
KATNB1
FUT10
RAP2B
PRDM15
CCL5
ALKBH7
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
TRIP4
SMCO1
CXCR5
MRPS18C
HELQ
RAB11B
DPP9
GBA
MTRNR2L1
ILF2
XAB2
NCOA7
KANSL3
H4C4
USP3
SKA2
PRR11
DRAP1
C11orf68
FSD2
BBX
AURKAIP1
KMT2C
HOOK1
MED23
COMMD2
SLC33A1
CMSS1
NDUFS7
EML2
MRPS23
LRRC14B
GCLC
FMO4
AQR
MNT
USP30
POLG
C2orf42
HSD11B1
INSR
TEPSIN
NDUFAF8
FAAP24
CEP89
TPST1
IFIT1
SMARCD2
TP63
CCDC77
WBP1L
POLR3F
DZANK1
SELENOH
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
ZNF451
WAPL
GALK2
COPS2
TYK2
PSMD4
KDSR
LSG1
TLR5
TIMM22
SMARCE1
RAD51AP1
NR1H2
MPND
C12orf4
RPL35A
PRPF18
NLK
IQCG
TUT1
SPTLC3
KIF16B
ARHGEF1
DHX8
ZNF609
EPRS1
H4C3
H4C15
H4C14
RAP2A
CRB1
C16orf72
KIF22
COPZ1
ARNTL
CIC
ZMYND8
RAD51AP2
TACO1
PPP6R1
MYCBP2
LTA4H
RBM28
MFAP3L
ATP5MC2
TSC1
TDRKH
RAB40B
GFI1B
DHX16
KLHL20
CLEC7A
ACBD4
RBBP5
PWWP2A
UNC93B1
STOML2
HAX1
KHSRP
GORAB
CYP2R1
NDUFS3
KBTBD4
RFX1
TLDC2
SH3GL1
METTL26
SCNM1
LYSMD1
PRRG2
NOSIP
PSAP
ECT2
YJU2
UBE2I
TOMM40
TFB2M
KCNN3
DDI2
CNST
RHOT2
ZSWIM1
ZNF668
ZNF646
CHD6
ZC3H10
COMMD1
CCT4
PPP1R37
GPR89A
GOLPH3L
FAM207A
ADRM1
INTS1
NSMCE3
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
CDC23
ARL1
NUF2
TTC21A
GORASP1
GABPB2
AP3S2
SSR3
SOD1
SACM1L
MAPK14
H4C12
PRR14
UTP3
NCBP2AS2
NCBP2
EVI5L
RPL27
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
JMJD4
RNF43
PAFAH2
MRPS15
DMAP1
LTN1
ZMPSTE24
THADA
NUCKS1
ISOC2
FRYL
CCDC61
POLR2J3
FBXO8
CEP44
UBE2T
TAF3
NDUFAF1
GTF2H2C
GTF2H2C_2
DNAJC14
DCP1A
SF3B6
FAM228B
LOC101927572
CCNC
ALKBH6
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
ATG13
FLAD1
LY9
EIF4A2
SIRT4
RPL26
PDE12
LRRC45
CENPX
AK2
BABAM1
TPD52L2
TNFRSF17
PRICKLE4
NPIPB2
KAT7
INTS4
FRS3
AP2M1
TDP2
RPS27
RER1
MORN1
FLT3LG
ACOT13
TRAPPC6A
TLR4
FDXR
BLOC1S3
ZC3HC1
UCHL5
TRNAU1AP
TIPRL
RO60
KLHDC10
KDM4D
KAT6A
CWC15
PSMD5
MLLT1
KNL1
KCNH1
RBSN
RABEP1
TSACC
FBXO38
CCT3
MRPL24
GPR108
SLC35B1
RAB11A
SPRY1
GOT1
ZNF830
VPS72
TRAF3IP3
NOL6
MKNK2
MIS18A
CCT6B
AHCY
SP2
ZNF687
HEXIM2
VPS26C
SLC39A3
RPS23
ATP6AP1L
ALG10B
NMNAT1
LZIC
ATP5MC1
SMG6
ZSWIM4
SAMD4B
LOC645177
FBXO11
C12orf77
TSSC4
PXMP4
CNOT1
DNM2
TBC1D10B
MYLPF
KRR1
CASP8AP2
SSBP2
ZC3H6
SYNGR4
EPS8
OSBP
P4HB
NFATC2IP
MRPS17
DOLPP1
ATF7IP
LARS1
STK17A
POLR3E
NSUN4
MAP1LC3B2
IGSF8
CCNI
XRCC4
TMEM167A
SETD1A
RFX5
PHF1
H4C9
CCAR2
TBC1D19
PRDM10
WDR24
TMEM259
NOTCH1
NIP7
ETV5
COG8
BARHL1
THOC5
NRTN
NCKAP1L
PSMD3
REEP6
PRPF8
PIP5K1A
PCSK4
FBXO40
CDK5RAP3
RUVBL1
DOCK8
CYP19A1
ANKRD39
RGS9
TADA1
UFC1
MED18
LAX1
ACTR2
LRRC8A
KYAT1
HDGFL2
AP3B1
OAT
NELFB
MRPL27
HUS1
FAM117A
EME1
ZNHIT2
NR4A1
ATG5
TRUB2
COQ4
AP2A1
SP1
COPS7A
PARP8
MRM3
GLOD4
GSPT1
SUZ12
RGS1
FAM160A2
ZNF669
MRPL1
ERCC1
ZNF384
KDM4B
STX16
ENSA
MTOR
CTNNB1
ZBTB45
RPL24
ERCC2
ADAMTSL1
TNFRSF19
DDX23
CLPB
BOD1
VPS50
HEPACAM2
UNK
H4C11
TMEM115
CALCOCO1
DDX49
COPE
CHMP4B
TCEA2
FEM1A
IFRD2
TBL1X
RWDD1
PHF12
H2BC4
FBXL19
TSN
AP2S1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H4C2
MAPKAPK5
GALM
PHB
WDPCP
TSNAXIP1
THRAP3
RANBP10
MDH1
FAM168A
BANP
DFFA
PRCC
MMACHC
CCDC163
RPS20
PPRC1
FAP
NUDCD1
NCLN
CALR3
C19orf44
SUCLG1
NEBL
ST3GAL2
HIKESHI
ZFYVE1
CCDC90B
TOM1L2
DRC3
PAK1IP1
C6orf52
TSC2
NTHL1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
SLC25A25
NAIF1
TMEM208
LRRC29
RAB5B
PANK4
BMF
SPSB3
LRCH4
FBXO24
INVS
ERP44
PPP1R12B
ZNF17
SMPD3
COX16
CCDC146
UCKL1
IFTAP
COMMD9
VIPAS39
AHSA1
NDC80
METTL4
HNRNPC
ZNF417
SNX16
RPS3
PEMT
PIGL
HRCT1
PES1
SP5
ING4
C16orf91
PNKD
AAMP
STIP1
NUP107
BUB1B
PIN4
GATB
GPR137
ZNF268
NOP16
HIGD2A
SRSF11
LRRC40
KHDC4
CNIH4
SNX17
EIF2B4
ZFPL1
CDCA5
ZNF140
SYMPK
FOXA3
DDX41
C19orf53
WDR74
ELOC
TMEM242
RPS7
TTI2
MED27
INTS9
HMBOX1
E2F4
CCNL1
ZNF211
RPL32
CYCS
TFPT
PRPF31
NEDD8-MDP1
NEDD8
GMPR2
DYNC1I2
RCAN1
NOC4L
DDX51
CRTC2
DMAC1
ZNF547
ZCCHC4
TRAPPC2B
MTRF1
SCAF1
ZNF225
RABL2A
GTF2H4
ZSWIM3
TMTC3
SEC11C
CEP290
ACOT8
STK25
COX7C
SPHK2
RPL18
RANBP2
NUDT13
NDUFB5
MRPL47
GUF1
SMARCAL1
NUCB1
ZNF165
UBQLN4
STAM
LAMTOR2
CAND1
TBP
PSMB6
PSMB1
NDUFAF5
ESF1
WDR46
PFDN6
BUB3
ZCCHC8
VARS1
TCERG1
H4C5
EHF
ZMAT2
VRK1
SMG8
RPS6KB2
METTL3
KMT2B
FCF1
AREL1
TOR1AIP1
OAZ3
NUP205
MRPL9
KBTBD6
TIMM21
SHPK
PPP1R12C
PNPLA6
PLEKHM3
FBXO15
EMC4
CTNS
SLC35E2B
GTF3C3
LIN37
GSTO2
ANAPC5
ZNF628
TRDMT1
THOC6
PHB2
HEMK1
HCFC1R1
ZFYVE19
VWA5A
NPRL2
MRPL28
DNAJC17
CYB561D2
C12orf43
ZSCAN22
ZNF605
KRT15
TBL3
NR6A1
MITD1
MRPL53
ABT1
MICOS13
HSD11B1L
ZNF286A
UFD1
NFIB
CDC45
AHCYL2
VPS25
UBR2
RPL37
CTU1
CDK5RAP2
POLDIP3
ATP5F1B
ATP5MG
ZNF383
ZNF337
PSMD11
EIF4A3
DDX39B
ZSCAN32
ZNF174
SEL1L
CCDC174
UBAC1
ATP6V1G1
TATDN3
PEX3
NSL1
GOSR2
FARSB
ADAT2
UFSP2
TMEM94
RPL14
UTP11
C1orf159
RAB5C
EFTUD2
CRADD
CD2BP2
CCDC103
ZNF500
NMT1
FASTKD1
DCAKD
ACTR1A
ZNF776
TIMMDC1
GSK3A
G3BP1
SEC13
DCAF7
ZNF444
SIRT2
NFKBIB
CLN3
STT3A
SART3
KCTD5
ISCU
DSTYK
DLGAP1
VCPIP1
C8orf44-SGK3
SLX4IP
SLC8A1
PDE6D
NME1-NME2
NME1
COPS7B
TRMT10C
TRAPPC3
TMEM60
SMAD3
PNN
PHTF2
KRT23
EXD2
COX7A2L
TSNAX
RPL18A
HEXA
ZNF143
LMAN2
FBXW11
TRAF7
SUPT7L
SLC4A1AP
API5
TPGS1
EXOC4
VEZT
SNX15
MTMR9
FGD6
SUPV3L1
SUGP1
RPIA
MAU2
H4C8
CIAO2A
ZNF235
CTDP1
ZNF26
MRPL21
MRPL20
IGHMBP2
ZNF420
THAP1
RBM25
TMX2
SUDS3
RNF121
RBM42
MED19
LOC100133315
EIF3F
SCYL3
ZNF688
C1orf109
ZNF226
SRD5A1
SCRIB
EIF2AK3
TPRKB
MARS1
ARHGAP9
TMEM63C
PABPN1
GET3
DYNC2I2
USP48
TXNL4B
DHX38
DUS3L
CCDC59
ING3
RPL21
CLDN2