ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
CBX1
BCAR3
KLF4
SMCO1
DUX4
POU5F1
JMJD1C
REEP3
SRSF5
KLF14
TMEM216
SOX2
ATP9B
COL23A1
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
EXTL2
ELOVL2
UBE3A
FAM184A
POU5F1B
C1GALT1C1L
CCDC130
C3orf14
PLXDC2
RAB37
MAD1L1
DHX40
TMEM43
CHCHD4
KCNJ15
RPL26L1
SIVA1
FANK1
MTRNR2L1
CHMP6
GAGE2C
GAGE2B
GAGE2A
ATP1A1
FEM1C
RPS14
ITGB3BP
EFCAB7
MTF2
TLR2
HNRNPL
TMEM44
ENOSF1
PAQR9
PTGES2
NBPF1
FAM227B
DTWD1
ANK1
RNF187
SPDYA
USP30
RTTN
VN1R4
SERPINB1
ZFP30
BRWD1
PEX3
ADAT2
SPATC1L
TTLL12
PNPLA7
HMGB1
USPL1
TRAF6
RAG1
CD47
DHRS7
PDCD7
SOX30
C5orf52
SAMD4B
TRDMT1
SLC11A2
ZNF584
AVPR1A
POTEH
C2orf88
ZKSCAN2
DCP1A
SLC39A6
POLR2J3
SDCBP
TFPI
ANO5
ANP32D
CCDC200
ANKRD18B
C19orf18
ANKRD54
EIF3L
XKR6
EIF2S2
ZCCHC7
GMDS
DUSP16
MRPL22
GEMIN5
NEIL3
ARMCX1
COLEC11
IQGAP2
HUS1
CLGN
TMX4
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
GAGE12F
NUF2
TMEM242
RAD54L2
LBR
SCGB1C1
NEK7
SLC10A7
BTBD10
RIPPLY3
RPAP2
GLMN
TMEM98
KAT6B
CAT
TMEM41A
CT45A10
DNM3
STX16
PCDHB5
ARHGAP39
SLC44A1
MTRNR2L8
NEMF
MRPL40
HIRA
DNMT3L
STX18
MIS18BP1
ZSWIM9
LIG1
ADAMTS20
C3orf80
KBTBD7
ZNF416
ZIK1
ZNF572
GTF2A1L
OR8B3
CNTLN
RNF38
ZNF562
ZMYM5
PPP2R2B
NUP54
PLCL2
HECTD1
EIF5A2
TASOR
PCDH17
CRH
CTNNB1
RFK
PRPF40A
ARL6IP6
NLGN4X
NSFL1C
PGBD2
C1orf53
WBP4
ELF1
BTG1
PRELID3B
ILRUN
DLAT
FAM153B
PSMG1
PARP16
KLHL7
GPR150
YPEL3
INPP5F
YBEY
MCM3AP
AGBL3
SULT1B1
USP35
KCTD21
RUNDC1
PTGES3L-AARSD1
PTGES3L
ZC3H12C
MRPS31
SNRPB
CLTC
TARS3
DNAH6
PJA2
AP1AR
YTHDF3
FKBP9
TMEM229A
PTPN12
OPRK1
LRP6
MARCHF7
FIGNL1
HSPA2
ACBD6
ADAM22
RIMS2
ZNF623
RPL11
HLCS
KCTD3
WNT2B
GRID2
AP3S2
DEK
USHBP1
KANSL1
ATL3
GAGE12G
GAGE12D
GAGE12E
GAGE12C
CLK4
RNF130
KLHL41
EPS8
CNTRL
C5
PPP1R9A
PCDHB4
SLC25A53
GDAP1
PEX2
ZSWIM5
GLRB
AKR1E2
TNFRSF11B
COLEC10
C18orf21
UTS2B
CCDC50
KCNN2
TRMT5
SLC38A6
TTC5
ZNF280D
ARHGEF12
RANBP2
SELENOT
LRRC8C
NARF
CYBC1
RPS29
MRPL48
FAM98B
LGR5
ZNF518A
KBTBD3
AASDHPPT
SVOPL
CLOCK
CARS2
DSTYK
MRPL21
IGHMBP2
SMIM13
ZNF26
ATG10
PPP2CA
HACD3
RMDN2
POLE4
TULP4
ALKBH3
MED4
SMAD5
DR1
VPS37A
CNOT7
ALG1
BOLA1
ACYP2
TMA16
BCKDHB
FBXO34
SLC39A8
PARP4
C15orf61
CERS6
PCDHB14
PCDHA4
REXO4
ADAMTS13
MS4A1
CCNI
C5orf34
HYAL1
NOTCH2NLC
FHAD1
PCDHGB7
P4HA1
PCDHGA11
MTHFS
DDX60L
PRKD3
CDYL
SNIP1
DNALI1
ZNF286A
CTSC
GADD45A
C12orf73
EPM2A
SPATA7
P2RY1
AKNA
LRATD2
TMOD3
NAPG
HYOU1
MRAP2
NOL12
ZNF25
STBD1
XKR4
BTG3
ADIPOR1
HPS3
NELFCD
RAD23B
SORCS1
INTS12
GSTCD
ZNF391
RNF125
RNF6
ZNF791
ZNF490
TAS2R4
CALM2
NANOGP8
ELOVL1
THOC3
SSH2
ACAT1
ZC3H15
MRPS5
PIK3CA
SNRNP48
WASHC1
SMARCAL1
RRAS2
MFSD14A
CTXN2
SGIP1
OTOP1
MYEF2
KRBA1
TMX2
MED19
SLC25A18
OR4K3
FZD1
EEF1AKMT2
CPD
UBE2D3
RSRC1
SAMD13
SHOX2
EIF4G2
DEPDC1
APOLD1
MTIF2
UBE4B
CPPED1
PXK
TYW1B
CLN5
PCBP3
TTLL7
STK17A
GPD2
PCDHGC3
ENAH
COMMD2
GINS1
SH3BP5L
NFE2L2
PPP1R12A
ARNT
E2F7
ACP6
PIK3R1
RUVBL1
MRPL42
ZNF329
EEFSEC
RPS6
PHF3
ORC2
HERC4
KAAG1
DCDC2
SRSF12
STAG3
GPC2
RFC1
DPY19L4
WDR74
GOLGA6L7
WDFY1
TIGD6
HMGXB3
NDUFA6
CRTAP
ZSCAN32
ZNF174
SH3RF2
MBD4
IFT122
ANGEL2
ZNF518B
SF3A3
SMIM12
VAMP4
PCM1
L3HYPDH
JKAMP
DTD2
SMAP1
FOCAD
GPR155
STX17
HECW2
TRIM27
ZNF829
ZNF568
SLC35A3
MAPK1IP1L
ARL4A
MDM4
LIMS1
SS18
ARFGEF1
TACSTD2
CD14
ZSCAN25
ZNF341
ZC3H6
EIF3D
MTLN
CCDC71L
ZNF24
HACE1
HADH
CDC42SE2
CRHBP
COPS8
DKK1
GNAI1
ZNF544
C4orf36
HSPA1B
SUPT6H
SDF2
MED23
GTF2H2C_2
GTF2H2
NSA2
GFM2
PDCD6IP
SCGB1C2
TOMM20L
RHEX
ADAR
UBQLN1
HDAC1
TYW3
CRYZ
HEATR5B
GPATCH11
FH
RBM15B
SVIP
JRKL
CCDC82
MPP5
LRRC7
COG6
TJP2
SLC25A27
CYP39A1
CHST14
BSDC1
CTAG1B
CTAG1A
RBBP9
TTC32
TATDN3
NSL1
OR1E3
OPRL1
LKAAEAR1
AUH
MRTFA
YTHDC2
SLC25A28
ARL13A
CEP78
HDAC9
SEC61A2
LIN7C
LGALSL
GPR88
RIOX1
PCDHA6
PCDHA5
GTF3C3
RPS3A
PFKM
ZFP42
SENP1
ANKRD36
PDK1
RNASEH2C
NAP1L1
DEPTOR
CRNKL1
CFAP61
COX18
MRPL17
NEK9
ZNF354C
SLC16A1
SMIM10L1
PRH1-TAS2R14
TBC1D31
RPN2
MROH8
NT5E
TRERF1
ZFP2
PCDHA7
SETD5
PCDHA12
PCDHA13
HSPA1L
HSPA1A
IQCF2
COG2
CA14
AGK
SPRYD7
NOL7
AKAP9
ZNF454
HTR5A
DRG2
DUS1L
GNAL
GOT2
SYT1
SLC35B4
ZSCAN5A
ZNF485
PAG1
FBXL5
SDR42E1
KANSL3
FER1L5
ABCC10
NOTCH2NLA
MTMR9
G3BP2
PRDX6
PCDHB10
PUS3
DDX25
FN1
ZNF324B
FASTKD1
FAM172A
PPP1R8
PPP5D1
CALM3
MPHOSPH10
MCEE
PTPDC1
MAGEF1
MYNN
ACTRT3
HECTD2
AATF
RNF138
POLR3D
FNBP1L
PGAP4
ADGRG6
ZNF566
SLC45A4
RAD52
ELF2
TLNRD1
HERC3
PYURF
PIGY
ELAPOR2
ANO10
PCNA
ABHD5
ITM2B
FZD7
PTGER3
TMEM185B
LRRC75A
ATR
PSMA1
C6orf89
DPP8
PPIL1
DNAH7
PRKAR2B
EGLN1
BTBD1
NCAM1
BTF3
PDE3B
SYT16
RNF32
NID2
FRA10AC1
REM1
DEFB124
MRPL44
TBCK
AIMP1
KMT2A
MTBP
MRPL13
KLHL20
AASDH
POLR1F
DCP1B
TMEM106B
SRSF11
PKD2L2
NTSR2
CC2D2B
CTHRC1
GGA1
LRRD1
CCDC138
RHBDD1
THUMPD1
UGT8
ATP5F1E
EDNRB
CFAP206
CXCL6
EXOC6B
DPF2
NRG3
HMGCLL1
GRIA4
CLVS2
FAM114A1
TRPA1
PRSS38
SRSF7
TMEM202
FAM160B1
ZNF670
SMG7
B4GALT7
MEMO1
RPL6
CYP51A1
UBE2Q1
CBR3
SEC24B
PTPN11
GABPB1
FAM161B
COQ6
IMPACT
SMC3
PCDHB3
GTF2E2
TRIL
TTC12
ZNF32
CCDC59
RTP3
CCDC88A
RPL5
LRTM2
ANKRD36C
SLC25A32
DCAF13
ANTXR2
RAB3IP
BTRC
ZFYVE9
TMEM267
GMFB
MRPS30
SYS1
SLC36A1
SLC38A1
STXBP5L
STRN3
AP4S1
ADRB1
DIPK2A
P3H1
B3GALNT1
GAGE12H
RBM5
EXOC2
AMZ2
SEC31A
TRAM2
THAP9
ZBTB6
NOC3L
BBS5
DNAH14
SLC35F5
ZNF594
ISCA1
FAM185A
MRS2
RALGAPA1
ERV3-1-ZNF117
ERV3-1
MINDY2
EIF3A
NUP58
SLC46A3
CAVIN3
BCL2
PLPPR5
KIF2C
SLC26A4
RDH16
ZNF419
ELP1
ABITRAM
AGPS
CBY3
FANCF
CCDC112
WASHC4
PCDHA3
QKI
PCDHA2
KLHL14
EIF2D
MAN2C1
ABCA3
CGGBP1
ZFP91
LPXN
SLAIN2
LUC7L3
ST8SIA4
SUCLG2
ZNF654
PRR5L
ZNF229
MED17
OR10AC1
HORMAD2
SLC24A1
INTS14
TMBIM4
BMS1
DDX1
HDAC2
METTL9
FER
YWHAE
TMEM65
PPP1R12B
ATP6V0D1
AGRP
GPR37
AGL
C3orf33
STAMBPL1
RPP25
CCPG1
C15orf65
KBTBD6
USP47
CHSY3
MGA
PTPN1
NSMAF
TCF25
ALMS1
ARHGAP31
PXYLP1
ENOX1
AMER2
SVEP1
SEMA6D
ARPP21
MB21D2
PDE11A
MTR
TGFBR2
PDGFD
CFAP20
TVP23B
PPP2R5A
MINPP1
TATDN1
NDUFB9
ZC3H14
TOE1
MUTYH
TP53BP2
CAPN7
ERMP1
ICE2
PTBP3
ARFGAP3
TRIM44
PTDSS1
MTERF3
INSIG1
KLF11
PRIM2
HSPE1-MOB4
HSPE1
HSPD1
KCNH1
WDR47
CCDC126
EFCAB13
GPR180
JAK2
PEX7
PLPP1
PCDHGB1
UGP2
ZNF655
GUCY1A2
PCDHGA3
LY75-CD302
LY75
SELENOH
ADNP
CCDC149
ZNF512B
NMRAL1
HMOX2
SPECC1
C2
NLE1
NFYC
MRGPRX3
CYP2R1
NXPE3
FZD6
SIGMAR1
PLD1
MAP3K1
MTARC2
MOXD1
PAXBP1
STK19
DXO
TSEN15
SDHAF3
EPHA3
TTC14
ZCWPW2
AZI2
DYNLRB2
TTC37
ARSK
PROS1
ERI1
TFAM
FAN1
CNIH1
ALG9
IFNAR1
LOC643802
CTBS
MANF
ZSCAN4
ATP7B
ALG11
MTMR2
KDR
SNX9
C2orf69
PRKACB
EIF3B
RICTOR
FAM174A
NKIRAS1
KTI12
PIFO
SNCA
CHMP2B
PLSCR1
PCLO
LRRCC1
FANCA
NASP
PRDM5
NR1D2
DNER
TBC1D7-LOC100130357
TBC1D7
SOWAHC
SEPTIN10
TRPC3
PCDHB9
B3GALT1
FBLL1
CGAS
FAM237B
QRFPR
DEPDC7
DNAJC25-GNG10
DNAJC25
KMT2D
MRPL58
PDE4D
ZNHIT3
PSMD14
GRIA2
CDC25B
STARD4
RMI1
HNRNPK
HSPA5
C11orf97
TMEM30B
KIFBP
CDC27
CENPB
HSD17B12
NCAPG
LHFPL4
CFAP91
SPEF1
PCDHA11
TRIP4
C16orf54
MRPL39
INTS2
TRAM1
POMZP3
SPNS1
ZNF621
INO80D
PPT1
GHITM
DIDO1
GID8
ITGB8
MYBL1
PCDHGA4
TMEM251
MOAP1
ZNF443
PHLPP1
TMEM200A
SAMD3
MOV10
GRB14
GTPBP6
DEGS2
WDR11
SPAAR
APRT
TPR
ODR4
GPC6