ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
DUX4
NOC4L
DDX51
ZNF436
MAMDC2
ZSCAN32
ZNF174
TMEM242
SNX11
CBX1
BCAR3
KLF4
B4GALNT4
SMCO1
SPATA13
PXDN
POU5F1
DYNLL2
JMJD1C
REEP3
KLF14
SRSF5
EDF1
RHOT1
TMEM216
HACD2
SOX2
ATP9B
COL23A1
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
TM9SF2
TCF19
CCHCR1
SLC30A7
EXTL2
NKX1-1
ELOVL2
UBE3A
DIP2B
FAM184A
POU5F1B
SELENBP1
ATP6V0A1
GTDC1
PRDX6
CYB5R4
MAP3K4
C2orf69
AKR7A3
C1GALT1C1L
CLIC3
CCDC130
C3orf14
PLXDC2
RAB37
HLA-DRB1
TSPAN5
MAD1L1
DHX40
ZNF550
TBC1D22A
TMEM43
CHCHD4
KCNJ15
PER3
RPL26L1
ZNF487
SIVA1
FANK1
ARHGEF4
MTRNR2L1
NT5C3A
PLA2G4E
CHMP6
SLC28A2
GAGE2C
GAGE2B
GAGE2A
GAGE1
FRMPD4
ATP1A1
FEM1C
RPS14
ITGB3BP
EFCAB7
MTF2
CPT2
TLR2
HNRNPL
TMEM44
SPATA2
ZNF627
ENOSF1
PAQR9
EDNRA
RANGAP1
ZC3H7B
ZNF555
PTGES2
ZNF792
NBPF1
FAM227B
DTWD1
ANK1
RNF187
SPDYA
USP30
VN1R4
RTTN
SERPINB1
TMEM239
C20orf141
ZFP30
RNF212B
BRWD1
ST3GAL5
PEX3
ADAT2
MRLN
SLC17A5
SPATC1L
WDR33
TTLL12
SCAF11
ZSCAN31
RSU1
PNPLA7
MRPL41
HMGB1
USPL1
SMAD1
DRD4
TRAF6
RAG1
CD47
ARMCX1
ZNF300
DHRS7
ZNF24
ART1
PDCD7
C5orf34
SOX30
C5orf52
SAMD4B
GMFG
MORC1
TRDMT1
SLC11A2
ZNF584
RNF225
AVPR1A
POTEH
GTPBP4
C2orf88
ZKSCAN2
DCP1A
HS2ST1
SLC39A6
SELENOF
POLR2J3
RPLP1
SDCBP
TFPI
ANO5
ANP32D
CCDC200
ANKRD18B
C19orf18
EIF3L
ANKRD54
XKR6
EIF2S2
ZCCHC7
SEMA3D
GMDS
DUSP16
MRPL22
GEMIN5
NEIL3
UGT1A10
COLEC11
ZNF614
IQGAP2
HUS1
CLGN
TMX4
EP300
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
GAGE8
GAGE2E
GAGE2D
GAGE13
NUF2
CLPP
RAD54L2
ZDHHC9
OR8J3
EPB41L2
LBR
SCGB1C1
ODF3
EDEM2
NEK7
ZDHHC18
SLC10A7
BTBD10
SYTL4
METTL8
KAT6B
TMEM98
RIPPLY3
RPAP2
GLMN
CAT
NEMF
TMEM41A
MOS
SAGE1
CT45A10
DNM3
STX16
PCDHB5
ARHGAP39
SLC44A1
MTRNR2L8
CNIH4
MRPL40
HIRA
SNX3
DNMT3L
STX18
MIS18BP1
ZSWIM9
LIG1
ADAMTS20
C3orf80
KBTBD7
BRSK2
TYW3
CRYZ
ZNF416
ZIK1
ZNF572
GTF2A1L
OR8B3
CNTLN
RNF38
ZNF562
MTERF1
ZMYM5
HLA-F
PPP2R2B
BTBD8
MAP3K2
CNOT6
NUP54
PLCL2
ZNF613
ZNF594
VBP1
CHAF1B
HECW2
HECTD1
EIF5A2
TASOR
PCDH17
CRH
CTNNB1
KCNF1
PRPF40A
ARL6IP6
RFK
MST1L
NLGN4X
SPATA22
ASPA
NSFL1C
PGBD2
BTG1
ELF1
LHX9
C1orf53
WBP4
PRELID3B
ILRUN
DLAT
ZNF486
PI16
FAM153B
FGL2
C5orf60
SLC25A12
PARP16
GPR150
PSMG1
KLHL7
YPEL3
TBX6
FGD3
INPP5F
RUNDC1
PTGES3L-AARSD1
PTGES3L
YBEY
MCM3AP
AGBL3
SULT1B1
USP35
KCTD21
ZC3H12C
FKBP9
MRPS31
SNRPB
CLTC
ATE1
TARS3
AP1AR
DNAH6
PJA2
UGGT2
YTHDF3
TMEM229A
SMYD3
PTPN12
OPRK1
LRIG2
SPATA6
LRP6
FIGNL1
MARCHF7
PPP1R36
HSPA2
ACBD6
VAMP1
ADAM22
RIMS2
ZNF623
UBE2D3
CISD2
RPL11
HLCS
KCTD3
WNT2B
GRID2
USHBP1
BABAM1
AP3S2
DEK
RTN3
ATL3
KANSL1
UGT2B10
GAGE12G
GAGE12D
GAGE12H
GAGE12E
GAGE12C
CLK4
RNF130
PAAF1
KLHL41
EPS8
CNTRL
C5
PPP1R9A
PCDHB4
MID2
DNAJC25-GNG10
DNAJC25
SLC25A53
FAM199X
GDAP1
PEX2
ZSWIM5
GLRB
AKR1E2
TNFRSF11B
COLEC10
C18orf21
ZSCAN18
UTS2B
CCDC50
KCNN2
TRMT5
SLC38A6
MAP3K19
TTC5
ZNF280D
ARHGEF12
RANBP2
SELENOT
LRRC8C
NARF
CYBC1
RPS29
FKBP11
ITPR2
RPL30
MRPL48
FAM98B
LGR5
ZNF518A
SVOPL
KBTBD3
AASDHPPT
FTCD-AS1
FTCD
CLOCK
CARS2
ING1
NUDT15
DSTYK
MRPL21
IGHMBP2
SMIM13
ZNF26
ATG10
PPP2CA
HACD3
RMDN2
POLE4
TULP4
CCS
CCDC87
ALKBH3
SMAD5
MED4
DR1
C16orf89
ALG1
SV2A
VPS37A
CNOT7
BOLA1
IER3IP1
ACYP2
TMA16
SPAG5
BCKDHB
FBXO34
RSKR
PARP4
SLC39A8
INTU
C15orf61
CERS6
PCDHB14
PCDHA3
PCDHA4
COX6A1
CHST3
REXO4
ADAMTS13
MS4A1
CCNI
NAA80
HYAL3
HYAL1
NOTCH2NLC
VPS26C
PCDHGB7
PCDHGA10
FHAD1
PCDHGA11
P4HA1
PRKD3
MICU3
MTHFS
DDX60L
ARHGAP45
NCEH1
CDYL
SNIP1
DNALI1
ZNF286A
CTSC
POLDIP3
EPM2A
GADD45A
TDG
C12orf73
SPATA7
TMOD3
P2RY1
LRATD2
AKNA
NAPG
VPS11
HYOU1
MRAP2
ARHGAP32
NOL12
ZNF25
STBD1
XKR4
CYB5R1
BTG3
ADIPOR1
RAD23B
NELFCD
HPS3
SORCS1
ZWINT
FAM193B
CLEC4M
MYLK
INTS12
GSTCD
FAF1
ZNF391
RNF125
RNF6
ZNF791
ZNF490
TAS2R4
CALM2
NANOGP8
ELOVL1
CDC20
THOC3
PIK3CA
SSH2
ACAT1
ZC3H15
RRAS2
WASHC1
SGIP1
MRPS5
SNRNP48
OTOP1
SMARCAL1
MFSD14A
CTXN2
MYEF2
KRBA1
TMX2
MED19
SLC25A18
EEF1AKMT2
OR4K3
TSACC
APOLD1
FZD1
CPD
SHOX2
RSRC1
SAMD13
EIF4G2
DEPDC1
ZKSCAN7
CREBL2
LHFPL4
MTIF2
UBE4B
CPPED1
PCBP3
NPIPA3
NPIPA2
PXK
TYW1B
STK17A
CLN5
TTLL7
PCDHGC4
GPD2
PCDHGC3
ENAH
ACP6
COMMD2
GINS1
SH3BP5L
ZNF672
NFE2L2
PPP1R12A
ARNT
E2F7
ZNF606
PIK3R1
RUVBL1
ZNF329
MRPL42
EEFSEC
RPS6
PHF3
ORC2
HERC4
SRSF12
KAAG1
DCDC2
GAL3ST4
STAG3
GPC2
BPIFB3
RFC1
ANGEL2
NDUFV1
DPY19L4
FAM120B
WDR74
STX5
GOLGA6L7
WDFY1
TIGD6
HMGXB3
CRTAP
NDUFA6
MBD4
IFT122
SH3RF2
ZNF518B
ELAC1
DIO2
SF3A3
SMIM12
RWDD2B
VAMP4
PCM1
SLC22A23
FOCAD
L3HYPDH
JKAMP
DTD2
SMAP1
GPR155
STX17
TRIM27
PSMD8
MDM4
ZNF829
ZNF568
LIMS1
SLC35A3
MAPK1IP1L
PRAMEF17
ARL4A
SS18
ARFGEF1
TACSTD2
LBP
TMPRSS12
ZNF341
CD14
ZSCAN25
MTLN
ZC3H6
EIF3D
CCDC71L
NPHP1
CRHBP
HACE1
HADH
CDC42SE2
RPGRIP1L
FTO
C9orf64
STAT1
MARS1
ARHGAP9
SLC27A2
ZNF544
COPS8
HSPA1B
DKK1
GNAI1
C4orf36
SOX4
SUPT6H
SDF2
MED23
ENPP3
GTF2H2C_2
GTF2H2
PDCD6IP
NSA2
GFM2
OR56A5
RHEX
SCGB1C2
TOMM20L
ADAR
SIAE
UBQLN1
HDAC1
RBM15B
MANF
HEATR5B
GPATCH11
FH
SVIP
JRKL
CCDC82
TJP2
MPP5
LRRC7
COG6
CHST14
SLC25A27
CYP39A1
BSDC1
CTAG1B
CTAG1A
TTC30B
RBBP9
B4GALNT3
TTC32
TATDN3
NSL1
OR1E3
NAXD
ZNF680
OPRL1
RGS19
LKAAEAR1
AUH
MRTFA
IRAG1
YTHDC2
SLC25A28
ARL13A
HDAC9
CEP78
KIF1A
SEC61A2
LIN7C
GPR88
LGALSL
RIOX1
PCDHA6
PCDHA5
C2orf66
TMEM106C
GTF3C3
MUC21
URI1
RPS3A
SENP1
PFKM
ZFP42
ANKRD36
KAT5
PDK1
RNASEH2C
NAP1L1
DEPTOR
ZNF662
XPO5
POLH
CRNKL1
CFAP61
MRPL17
COX18
ZNF285
NEK9
TBC1D31
HSPA1L
HSPA1A
ZNF354C
SLC16A1
SMIM10L1
PRH1-TAS2R14
SETD5
LSM2
NT5E
RPN2
MROH8
TRERF1
PCDHA7
ZFP2
PCDHA12
PCDHA11
PCDHA13
ALKAL1
IQCF2
LRPAP1
ARL8B
RAD54L
COG2
AGK
CA14
ZNF454
PDS5B
SPRYD7
NOL7
AKAP9
HTR5A
DRG2
ZC3HAV1
GNAL
NCBP3
DUS1L
MUC3A
ZNF135
GOT2
ZNF485
SYT1
MATN3
SLC35B4
ZSCAN5A
FBXL5
PAG1
DAPL1
SDR42E1
KANSL3
FER1L5
NOTCH2NLA
ABCC10
MTMR9
G3BP2
PCDHB10
PCDHB9
FLACC1
PCDHB11
PUS3
DDX25
FN1
ZNF324B
ZNF132
PPIG
PNMA3
FASTKD1
ACTRT3
MYNN
PTPDC1
FAM172A
PPP1R8
PPP5D1
CALM3
MPHOSPH10
MCEE
POLR3D
RNF138
MAGEF1
FNBP1L
HECTD2
AATF
ADGRG6
PGAP4
ZNF566
SLC45A4
RAD52
PCNA
TMEM230
ELF2
TLNRD1
ANO10
HERC3
PYURF
PIGY
ELAPOR2
CDS2
ABHD5
ITM2B
FZD7
PTGER3
TMEM185B
LRRC75A
C1orf159
POU2F1
PRKAR2B
ATR
HDHD5
PSMA1
BTBD1
C6orf89
DPP8
PPIL1
SCGB2A2
EGLN1
SPACA5B
DNAH7
BTF3
RNF32
NCAM1
SYT16
PDE3B
NID2
THUMPD1
ZNF443
FRA10AC1
REM1
DEFB124
NTSR2
LPIN1
MRPL44
TBCK
AIMP1
KMT2A
MTBP
MRPL13
KLHL20
TBC1D5
AASDH
POLR1F
DCP1B
TMEM106B
SRSF11
PKD2L2
UGT8
ATP5F1E
CC2D2B
LRRD1
GGA1
CTHRC1
RHBDD1
CCDC138
EDNRB
NRG3
CFAP206
CXCL6
EXOC6B
FAM114A1
DPF2
HMGCLL1
GRIA4
CLVS2
TRPA1
PRSS38
SRSF7
TMEM202
FAM160B1
B4GALT7
ZNF670
SMG7
TMED9
CYP51A1
MEMO1
UBE2Q1
CHRNB2
CBR3
RPL6
PTPN11
SEC24B
FSD1L
GABPB1
FAM161B
COQ6
IMPACT
PCDHB2
SMC3
GTF2E2
PCDHB3
TTC12
TRIL
ZNF32
RTP3
LTF
CCDC59
STXBP5L
FAIM
LRTM2
CCDC88A
RPL5
CEP70
TFAP2B
ANKRD36C
SLC25A32
DCAF13
ANTXR2
RAB3IP
BTRC
ZFYVE9
MRPS30
TMEM267
GMFB
SYS1
SLC36A1
SLC38A1
STRN3
AP4S1
P3H1
ADRB1
DIPK2A
B3GALNT1
ERV3-1-ZNF117
ERV3-1
IFIT1
EXOC2
RBM5
AMZ2
ZBTB6
RC3H2
MRS2
THAP9
SEC31A
SLC35F5
TRAM2
NOC3L
BBS5