ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186627 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◣ SRX186627: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ CUX1: STRING

FAM136A
PLCD3
ACBD4
DAGLB
MEIS1
TTI2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
CUX1
PPP6R3
MTRNR2L2
MSH3
DHFR
SIK2
NRCAM
PIP5K1C
LGALS9
PAQR5
SIRT4
H2BC15
H2AC15
ABR
TRIM35
PTK2B
BCL7B
KPNA6
RPP21
KDM8
SACM1L
MTRNR2L8
NUDT15
AKIRIN2
SSH1
AGPAT1
LATS1
IRF2BP2
TMCO6
TMEM214
RDH11
NTMT1
C9orf50
SLC25A25
NAIF1
TMEM167B
VCP
AMBRA1
DEDD
SH3BP5L
ZNF77
MRPS15
H1-2
PRKAB1
OXSM
NGLY1
RGPD2
RGPD1
VWA5A
BCL10
EXOC2
NBEAL2
CCDC12
TMEM161A
PALB2
DCTN5
EIF2B3
NOSTRIN
EIF4E
COG3
ADCY3
RPL36
SRSF4
ILF2
SNRNP70
LEMD2
ZNHIT3
PSMD3
SNRPB2
CLN8
NFIA
RIF1
HEXIM2
COX16
MTRNR2L9
ANKRD33
TMEM107
IL1RL1
DHX37
BRI3BP
ATMIN
ZFP91
LPXN
AARS2
MAF
UQCRHL
BAIAP2
ZNF700
CCDC59
LYZ
LUC7L2
FMC1-LUC7L2
FMC1
SERPIND1
MTO1
CFB
PDK1
SPAST
COX19
PIGO
TOP2B
H1-0
GCAT
TBL1X
LACTB
CDC14A
STMP1
PCM1
PPP2R1A
LAPTM4B
FAM102B
GALNT1
XRCC4
TMEM167A
RNF44
CDHR2
SAMD1
TMEM139
SH2B3
CASP2
MRPS23
KIAA0100
LRRC61
PREP
RAB21
FBXO7
IFITM3
MAP3K7CL
CCT8
SND1
CTSS
TRIM7
RICTOR
MTRNR2L10
TMPRSS11F
THEM5
PPP6R1
WDR74
KIAA2026
ARRDC3
SMIM10L2B
INTS8
EXOSC5
BCKDHA
HOXB4
HOXB3
HES7
ALOXE3
HBP1
RBSN
FCGR3B
FAH
UBE2C
KNL1
PRR25
ETFDH
C4orf46
WDR12
CARF
MTFMT
IFI6
WBP1
INO80B
KLHDC8A
TMEM141
NAP1L1
GXYLT1
APOC1
MTHFR
MAP3K20
LSM14A
BRD3OS
AP1M1
SNRNP35
E2F1
PPARD
HEMGN
BMF
RANGRF
OTX1
MYADM
PPM1F
IL6
ACVR1
FAM104A
C17orf80
DIRAS1
PCNX3
MAP3K11
CEP20
CARD8
GSTA4
CCDC174
CSTF1
AURKA
PDE6A
DUSP10
RBBP5
HSPA1L
HSPA1A
ELOF1
ACSL1
RPS11
YARS1
S100PBP
FAN1
CPLX2
PEX16
LARGE2
BNIP2
TCF7L2
ARHGAP17
SLC30A1
CSTF2T
PTCD1
CPSF4
SLC7A8
RNF212B
NKX1-2
AHCYL2
CXCL6
ANXA1
NIP7
COG8
RPN2
MROH8
KYAT1
TNRC18
LOC100129484
MAMDC2
EMILIN2
POLG
VPS13D
CXCL2
EPC1
PRAME
DIXDC1
CRYAB
MINPP1
RAD54L
ZFAND3
TMEM53
ARMH1
BORCS6
SHC2
PIM1
NR2F6
SAMD4A
ZRANB2
MTFP1
DHRS4
TSPAN17
TCTA
RHOA
RPL22
ST6GAL1
SURF6
PSMA1
AFTPH
VBP1
SURF4
MMD
ACTR3C
RTN4RL1
DPH1
HDC
GNE
MLST8
XPO5
POLH
ZDHHC2
MVD
BTG2
APOOL
SHF
TAOK3
SUDS3
RPS8
MTRNR2L1
IL6ST
UTP3
SRSF11
SCP2
PLAAT2
NFATC3
HRC
FTSJ1
PJA2
TBP
PSMB1
TOP3B
TMSB4X
IFI16
UBA6
MOB1B
PLD1
CDC73
GLDN
GNAI3
STRIP1
SLC12A3
PFDN2
PAXBP1
NIT1
GNAS
TMEM237
ZCCHC24
SGPP1
OS9
CD84
IMMP2L
VPS28
CYP3A5
PHF21A
TEPP
C8orf37
ZNF511
TUBGCP2
ADARB1
RPL27
PEX6
CXCL3
FBXW5
C8G
GART
RPS29
UBE3D
DOP1A
COPS4
FARSA
CALR
ZNF846
COP1
LDLR
FTCDNL1
TMEM74B
CCPG1
C15orf65
PPP3R1
FRG2
MAN1B1
AP3S2
SLC26A1
ZNF623
RAF1
R3HDM2
INHBC
POMT1
UBE2D2
TRIP4
SLC25A37
CA1
VAMP4
TGIF1
OGDH
OR4F17
PIH1D1
ALDH16A1
FNBP4
VOPP1
CRLS1
LRRC8B
CEACAM16
RNF34
C11orf16
DARS1
PLAAT3
HOXC10
MRPL35
FDFT1
C3AR1
BTBD1
OSTF1
NMRK1
NOP14
GRK4
MMP9
ACVRL1
PLCXD1
NDUFS7
TLE2
LBR
KATNA1
HDDC2
ERMN
AKAP4
MTRNR2L6
SCRT2
RHOQ
ATP6V1E2
CREB3L1
KLF3
PIK3CA
DYNC2I1
TUT1
TWSG1
ID2
MBNL1
TRIM63
SPTA1
ZFHX2
THTPA
PLA2G12A
FCGR3A
TMEM91
B9D2
FDX2
BTN3A2
TM2D1
LRTM1
PDXK
GFPT1
USP33
SLC22A24
SART3
ISCU
EFHC2
ALDH9A1
HNRNPA3
SNRPD2
QPCTL
MRO
TRMO
PCK1
DIPK1A
MED16
PITPNC1
C1orf158
POLR2D
DDX6
TET2
HOXB9
PRKAA1
ODF3L1
GINS3
WIZ
DPP9
RBM15
PSME4
FECH
CSRNP2
ACYP2
SHOX2
RSRC1
PABPC1
NCOA7
VPS16
TEX38
PCED1A
DAO
C3orf86
BNIP3L
SPAG17
BATF2
TBC1D15
ZNF93
OR8G2P
DENND11
LSM5
AVL9
ERCC2
RPL23A
RNF224
RNF208
RAB34
LIN54
CYSRT1
CD2
ADAMTS6
ADAM17
ITPKC
FAM111A
COQ8B
CD55
RBM48
PEX1
ZNF263
NSD3
LETM2
APOBEC3B
PRC1
HIPK1
SOS1
DUX4
NUDT13
MTFR1
LRIG2
ERMAP
GTPBP6
ZNF451
VPS72
PLPPR3
AZU1
ANGEL1
KRT8
H4C8
BAHCC1
DENND4A
GMDS
ULBP1
SLC26A2
GADD45A
AIP
SENP5
DNAJB4
HBG2
HBG1
H3C10
H2BC14
H2AC14
IL4
SNX18
PRICKLE3
PRRG2
NOSIP
MAPRE2
U2SURP
LRRC10
SGK3
IAPP
NUP214
VAMP5
ZRANB1
LASP1
KRAS
PPP1R15A
CCDC92
CACNG3
ZNF425
ZNF398
TMF1
KLHDC10
SLC9A6
PTP4A2
ITGAV
EGR2
MMAA
LIMS1
IL15RA
MYC
GPLD1
CELA3A
ALDH5A1
FKBPL
ATF6B
FOXO3
PHF19
VILL
TMEM273
RGL1
EGFLAM
ARPC5
UQCRH
LRRC41
PSMD9
HPD
DNAJC1
TIA1
SLC29A1
RUSC2
IL18BP
GALNT2
VAPA
TSR2
TENT2
COPB2
CFAP298-TCP10L
CFAP298
USP6NL
KDM2B
LSG1
ARF4
NDUFA5
CLK3
UTS2B
CCDC50
DDI2
PCNT
C21orf58
PLA2G4C
C1QTNF1
TIMM10
SNAP47
KMT5A
JMJD4
MAN2A1
SARS1
HSPA6
TEX2
BMS1
ODF3L2
OAZ2
RPS15A
PSME3
HTR1F
HEATR5A
MKLN1
BCR
OR4F5
ZFPM2
ORMDL3
ZBTB45
TXNDC12
FERMT3
COL6A5
BTF3L4
WDPCP
TCF4
TBK1
MDH1
CAPN2
ZNF587
STX1A
NECAP2
LRRC59
RTN4
PIR
LGALS12
TFAP4
SNX12
RPS6KA5
PHC2
LIG3
ID1
DNAJB12
DGLUCY
MSRB1
MKRN3
EIF3E
RASAL2
GUCA1B
HKDC1
SALL4
SEC22B
CHRDL2
LTA4H
TAB3
RBM28
OR4F4
CUL2
EVI2B
INTS12
GSTCD
COMT
CAV2
PEX14
DFFA
ZNF219
PCDHB15
NFKB1
FDXACB1
C11orf1
EVI5L
H4C5
TENT5C
SLC22A15
MTMR11
LRRC23
TMOD1
GARRE1
FLOT2
DHRS13
CRKL
INO80C
TATDN3
OPA1
NSL1
MUS81
CFL1
C11orf24
DMAP1
OR2T1
KIF1B
FOXL1
CS
TMEM17
STX16
RNF43
PHIP
IKBIP
FKBP3
FANCM
EEF1E1
CRYGS
APAF1
RMND1
ISYNA1
HNRNPF
C2orf88
ARMT1
RWDD1
PRKCSH
CCDC151
FBXO38
DCTN4
BAG6
APOM
SSBP1
ARHGEF1
SLC33A1
NAT16
LIMA1
MYNN
ACTRT3
PRPH2
PPIL1
LYPD4
DMRTC2
C6orf89
C1S
BTF3
BSDC1
ADSS2
SHPK
MXD1
KBTBD6
IBTK
CTNS
ZADH2
TSHZ1
LAMB1
GBA
ZNF668
ZNF646
ZKSCAN8
PLEC
NMI
NAGLU
CIDEC
LRP11
PPP1R3D
FAM217B
SLC30A5
RUFY1
PSMB7
FAM184A
AQP8
TFR2
MED13L
SLC18B1
RINL
NOB1
DLX2
ATP2C1
ANKRD40
ADAR
GRWD1
C7
BRD2
ARID1B
PTMA
RPL35A
IQCG
RBBP6
POMZP3
MRPS22
ICE1
COMMD3-BMI1
COMMD3
MED23
RIMBP3C
PTK2
RIMBP3B
PLSCR2
KIFBP
FKBP8
ANKRD17
AIFM3
KAT6B
HDAC8
CNKSR3
C9orf40
ARHGAP12
ASXL2
RANBP2
AKR1B15
SERPINC1
HMGN4
ANKS6
CPPED1
INTS5
TMEM221
SCMH1
SAXO1
PWWP2B
MELTF
ACTL6B
KMT2E
SFTPA2
PANX3
CCM2
CXXC5
ZSCAN23
ZNF839
PFN1
HNRNPH2
GSPT1
ENO3
CASS4
ANTXRL
VAMP1
SH2D3A
RPS7
GATAD2A
SIX5
ZMYM4
STIL
RPS24
PPP1R14D
POLR3A
NQO2
LMNB1
B4GALT3
LRP10
SPATS2
PRMT5
CBX5
AKAP11
TSHZ2
TM7SF3
PIGC
C8orf49
NUF2
ZMPSTE24
TINF2
PYDC5
PHKB
MKRN2OS
MKRN2
ITFG1
CDIPT
ADAT1
FAM126A
TMED1
TTC3
MOB4
MDK
MAD2L2
HIGD1A
DRAXIN
DCTN1
STAT3
H4C3
H1-6
SLC25A35
PMPCB
KMT2C
EYA3
TSHZ3
TENM1
SLC45A3
TRAF5
STRIP2
SFTPA1
PTPRF
NFKBIL1
MBLAC1
HSF5
GBP2
FCGR2A
DDX39B
CENPV
CCL24
ATP6V1G2
ANKRD53
TPM4
UBQLN1
TMEM9B
SEPSECS
PPIP5K2
GIN1
EXPH5
TAF3
PSMB4
C2CD5
UCK1
POLDIP3
NFKBIZ
DCT
VCL
TOP1MT
SMIM19
SMARCD2
SLC20A2
PDIK1L
KIAA1958
HECW2
C9orf147
KLHL20
ZNF391
SMIM9
SLC6A9
SETX
OSBPL9
HSPBP1
HEPH
ELAVL1
BRSK1
ADGRG3
MAPK1
TRIM69
TMEM63B
TEX9
TCAP
RFX7
PSPN
PNMT
MRPL14
GYPE
ECI2
E2F6
C5AR1
APBA2
ALKBH7
MST1
ZC3H11A
ZBED6
SPTBN4
PCYT1B
MAN2C1
FAM13A
BLVRB
ABT1
DCLRE1B
AP4B1
MGAT5
TRAF2
SDF2L1
RGCC
PLEKHA8
PCOLCE2
LRRC47
ANO10
ABHD5
NSUN4
CEP350
TOP1
PLEKHA5
CLIP1
CEBPG
NCOR2
SOCS2
NPL
FBXO11
EXO1
CRADD
ANP32E
TTC37
ARSK
ATP5MF-PTCD1
ATP5MF
POLR3E
SETDB1
KDM3A
XIRP1
TANC2
SPSB1
SMG8
RCC1
CHML
ZNF280A
RUBCN
MAN2A2
SSBP3
CCDC88B
BEND7
BCL6
UBA3
ARL6IP5
PLXDC1
FAM200A
GRAP2
NME1-NME2
NME1
SPAAR
UFD1
TMEM245
STBD1
SPATA9
RHOBTB3
LIN28B
HRCT1
EEF2
DOCK11
DDX42
CDC45
CCDC47
ASAP3
TOM1
TMEM161B
NUP210L