ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150671 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BRSK2
ZNF436
OBSCN
ZWINT
BSDC1
CYB5R4
ZNF550
ZNF555
APOC3
APOA1
MID2
ITGB3BP
EFCAB7
FGD3
ZSCAN32
ZNF174
SMCO1
AADACL4
C19orf18
GTPBP6
MAPRE2
ZNHIT6
WDR33
ZNF514
SMYD3
KAT6B
MRPL55
DEGS2
SELENBP1
ZBTB26
RABGAP1
INKA2
DDX20
ZNF134
RRAGB
ZSCAN31
F2RL3
YPEL3
TBX6
ZNF572
TTLL1
ZNF24
STC1
PRKACB
ZNF3
SRPRB
NRARP
ST20-MTHFS
UBE2F
CRLF2
AKR7A3
DUSP6
SAMD14
ZNF433
ZNF878
MTRNR2L8
LDHD
ZNF623
KRBA1
RABGAP1L
IFNAR2
SF3A3
EIF4A3
RBBP5
CPLX1
YWHAQ
TSPAN5
ABLIM2
ANO9
PTDSS2
DHRS2
NXPE4
TSKU
MKLN1
ZNF426
GCNT7
FAM209A
GALNT1
COL18A1
ARHGAP39
ZBTB8B
RCAN1
ZNF501
ZNF502
PDE11A
ZNF829
ZNF568
ZFP30
GPR35
NKX1-1
FRMPD4
MTF2
SUMO3
MYOG
ATF7IP
TMEM229B
ZNF891
ZNF10
NUF2
MRPS33
COX16
FAM184A
ZNF32
TBC1D22A
UQCRC1
TMEM89
CANT1
C1QTNF1
TMEM109
TMEM132A
SAMD4B
GMFG
NOX5
GABPB2
MLLT11
EDF1
GBA
GTPBP4
ZNF222
ZNFX1
MSRA
MROH7
GLT6D1
PRSS38
B3GNTL1
ZNF594
KDM3A
DUX4
THEM4
ATL1
SLC33A1
C10orf143
ATP5F1B
IER3IP1
ZNF792
ZNF350
BPIFB3
ZNF491
ZNF440
NDUFB3
FAM126B
MTR
TEAD2
DKKL1
GLYATL1
OPRL1
RGS19
LKAAEAR1
ID2
ZNF404
ZNF117
RTP5
IL22RA2
RPL27
IFI35
LCA5
PAXBP1
TBC1D19
TMEM161A
ISY1-RAB43
ISY1
YY1AP1
DAP3
SUPT7L
SLC4A1AP
FN3K
SSBP1
DISP1
ZNF772
ANP32D
VPS13D
RBM33
ATP5MC2
GLIPR1L2
CDCA7
DBNDD2
ACTL8
RPIA
SLC2A8
COQ8A
DNAJC25-GNG10
DNAJC25
CALCRL
NARS2
TTI2
SAMD7
COX7A2
RNF125
UTP3
COL4A6
COL4A5
PRRT1B
TFPT
PRPF31
MAP3K4
ZNF662
TRIP4
PCLAF
NBPF1
ZBED9
TLE7
ARID1A
ZNF408
ARHGAP1
TBL1X
RPL12
LRSAM1
SLC30A7
EXTL2
AURKAIP1
CROT
DMAP1
ZNF300
KRTAP5-2
KRTAP5-1
ZNF83
VARS2
GTF2H4
SLCO1A2
ACY3
ZNF165
GYPC
PRRG2
NOSIP
ZNF75D
SERPINA3
SNX11
CBX1
NTSR2
TLR2
DNAJB12
USP21
UFC1
SULT1C4
JMJD1C
ZNF324B
ZNF132
ZNF571
ZNF540
PLA2G4E
AHCYL1
SAP130
RPS7
LY6K
SIPA1L2
ZSCAN18
TM2D1
RPS29
NOP16
HIGD2A
ALG14
LCN8
LCN15
LCN6
CREM
HECTD4
CEP85L
GRAMD4
COMMD2
LARP1
EXOC6
ZNF577
ZNF461
HDAC8
ACP6
TESK2
MMACHC
CCDC163
CYP46A1
PPIP5K2
GIN1
ZMPSTE24
TMCO2
COPS4
ZNF470
VTA1
NMBR
RERE
CCDC59
LIMK1
ZNF527
SMTN
SCTR
FBXW7
LMBR1
ZNF454
AASDH
GADD45A
MS4A10
SLC1A7
CD14
ANKRD35
TMEM14C
PNMA3
ZNF614
ZNF20
ITFG2
C2orf69
ZSCAN22
LMTK2
RAB30
NUP107
CACNG1
FAM193B
MED23
ENPP3
OR4K17
PIH1D2
NKAPD1
MIS18BP1
CFAP298-TCP10L
CFAP298
HEATR1
MNAT1
GDNF
LRP5L
TEX50
CNIH4
SOX30
IRF2BP2
SLC28A2
TEFM
GPC6
ZNF416
SCMH1
NPR1
ILF2
TTC26
ZSCAN29
TUBGCP4
CCL24
CAT
SGPP1
NEMF
LPIN1
GPBP1
EIF3F
MRPL1
TTC32
PEX3
ADAT2
NDUFS7
TMEM242
BRF2
CDK14
ZNF726
ABR
TEDC1
CRIP1
CRIP2
POLR3B
GRPEL2
SPANXB1
PAFAH2
COL23A1
TACO1
TRMT11
SNX20
TRMT5
SLC38A6
WDR11
TMEM259
CNN2
ADGRF1
EPB41L2
RDH12
STAT3
EPHA3
DOK3
DDX41
MSH3
DHFR
MTRNR2L2
OR1F12
TMEM125
NME1-NME2
NME1
PXDN
PDXK
ZNF135
YJU2
ATP5MF-PTCD1
ATP5MF
MRPL48
ELFN2
TEX46
KDM1A
RCAN2
TAS2R39
EPRS1
HLA-E
AMD1
CDK19
RAD51AP1
C12orf4
AP3S2
SUCLG1
SAR1B
RNF187
CLTB
C8orf37
GTPBP3
ANO8
SLC25A53
FAM199X
HAPLN2
KRTAP10-1
LUC7L
FAM234A
ELFN1
SELENOH
PIKFYVE
SPATA33
ZNF613
ZNF391
EIF2S1
ATP6V1D
ZNF263
B4GALNT2
IRAK2
RPL37
CARD6
WEE1
PFDN1
PEX7
E2F2
CDC5L
PPRC1
IL17F
BORCS7
INTS2
PUS10
PEX13
NUDT14
POLR2J3
ATG4C
RPS26
MAST2
PRDX6
ZNF226
BORCS6
INTS5
GANAB
ARID3B
FAM13A
TRAPPC8
MYO1H
RBBP9
SEC23B
LGALS3BP
REXO4
ADAMTS13
RAB18
MAN2A1
ZNF708
NOTCH2NLB
FOXO3B
ZSCAN30
TNFRSF1B
MT1HL1
IGFALS
IARS1
BAIAP2
EIF1AD
CST6
BANF1
ZNF383
CPPED1
CCNI
PLAGL1
ZNF585B
TTC7B
BMS1
CRYAA2
CRYAA
SPRR2F
PCYT1A
PDP1
CCDC174
SF3B5
MBOAT4
DCTN6
HTRA2
DQX1
GNB1
CNGA1
HAX1
NIPAL1
ITSN1
CRYZL1
TATDN2
PLK2
MITD1
RAG2
IFTAP
IL36B
IL36RN
DUSP14
ZBTB44
ZNF879
HACD2
SMG8
TFF1
TFF2
BCL2L13
ATP6V1E1
MLPH
MINDY3
SLC45A4
SNRPD1
SAMD1
C19orf67
GSR
ELAC1
RNF217
PCDH15
FRA10AC1
COX6A1
WBP1
INO80B
FAIM
DHX16
IFNAR1
GOLGA5
LSG1
SIT1
CCDC107
ARHGEF39
MYH2
B4GALNT4
SLC24A1
INTS14
MIPOL1
MMEL1
ZBTB33
ZNF791
ZNF490
TNPO3
NOL8
CENPP
IGFL3
EIF2D
NEU1
L2HGDH
DMAC2L
PKP3
PPIL3
NIF3L1
PER3
MRPS23
RPL5
SHOC2
BBIP1
GABRR2
ZBTB25
ZBTB1
C4B_2
C4B
NOS3
TNXB
BFSP1
TRMO
INHBE
GLI1
C2orf88
EFHD1
NR1I2
CPD
MYLK
MED18
PTPRN2
TTLL12
DCT
TAF4
CWC25
SLAIN1
MAMDC2
APOBEC3B
DIO2
METTL7A
CELSR1
FDX1
SPAG9
TMEM41A
SPANXC
ZNRF4
AP1G1
RPA2
MAGEA11
POMGNT1
LURAP1
KRR1
NT5C3A
HTR5A
TMEM44
LOC100289561
FAM120B
PALM
DLL1
ARHGAP45
FKBP5
TMEM79
SMG5
ABL1
SMG7
VPS35L
PARD3
MRPS18C
HELQ
SNRPD3
GUCD1
EVPL
LUC7L2
FMC1-LUC7L2
FMC1
RTTN
RPS3A
PLCH1
ELAVL2
RBM45
VPS52
RPS18
B3GALT4
ZNF790
DYNC1H1
SIAH1
ENG
RNF207
RPL22
LRRC49
THAP10
RIOK2
FGL2
TDP2
ACOT13
LRP6
KDM5C
CD2
LBP
LTN1
PRSS16
C1orf159
MOB4
CCDC97
GALNTL5
PDCD6IP
ZNF518A
CSRNP3
ZNF189
MRPL50
SGMS2
PDE1A
IFIT1
NOTCH2NLA
TAAR5
DYRK4
NID1
PNPLA7
MRPL41
CDYL
FANCC
PRAMEF1
FCGR3A
ARMC7
DRG2
PPP6R1
SNIP1
DNALI1
CHIT1
P2RX2
LRCOL1
DPYSL2
PNMA2
REEP3
SKP2
LMBRD2
DNM1L
CYP4F22
LRRC27
TUT1
MTA2
PES1
TMEM101
PACSIN2
TARS3
RNF39
PPP1R11
POLR1H
SYF2
RSRP1
GTF2H2C_2
GTF2H2C
ALKBH3
ZSCAN25
FDXACB1
C11orf1
ALG9
DCLRE1B
AP4B1
FAM13B
ZNF570
ZNF569
PRSS21
NCOA7
UBR2
ARMCX5-GPRASP2
ARMCX5
CCNC
GLRA1
KRTAP10-9
SULT2A1
DCP1A
MACROD1
PDGFD
ZDHHC6
VTI1A
MAP3K14
GSTA4
RUNDC3B
RFFL
KAZN
SLC18B1
RAB5IF
TTC39C
HLA-C
TIAM1
AARS2
CLEC18A
UBE2D3
CISD2
LIMS2
RIF1
TUBB
MDC1
ZNF143
DSTYK
ZC3HAV1
ATG5
ZNF793
POLG
GPRC5C
THUMPD1
CFHR4
INO80C
IRF9
TMEM275
GMEB2
ZMYND8
INSYN2B
KCNMA1
NECAP2
PNISR
SHISAL2B
MRPS16
DHTKD1
DNAJC9
POLDIP3
TMBIM6
WDPCP
MDH1
EAPP
TIGD2
PHC2
KIF3B
CCNB1IP1
PARP2
FAM124B
TMEM262
PHGDH
WDR74
STX5
RANBP2
ZNF585A
WDR36
ARID5B
OSGEPL1
LONRF2
RPS13
RGS18
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
IKZF3
TOMM20
DDX43
IL36A
PCDH9
PLA2G2A
NTN1
EFHD2
ZNF230
LOC110384692
C4A
TAF12
FAAP20
GCNT2
CSNK1E
DOCK3
GORASP2
TRUB2
COQ4
SYT1
DUXB
EDDM3A
PLA2R1
SOBP
CTAG1B
CTAG1A
CLEC4M
CD209
LRIG2
MDM4
TPM3
SLC39A9
ERH
C1orf189
CFAP20
HTR7
DNM2
TMPRSS12
MTOR
NOTCH2
SLITRK5
TM9SF3
ALG10B
KANSL3
FER1L5
CREB5
ZFP36L1
KIF12
DAPK3
SMIM12
ZNF280A
HBS1L
PPIG
SLC27A5
CALCB
TXN2
ZBTB45
SDR42E1
ZNF443
ACTRT3
MYNN
PCBP3
THG1L
BRAP
ACAD10
HTR3A
SEMA3D
LY6L
MTBP
MRPL13
PSMD9
HPD
ADAM21
ADCY10
ZNF566
ZNF292
BZW2
POC1B-GALNT4
GALNT4
ARRB2
PELP1
NECAB2
RPS14
RDX
RSU1
CAPN11
ZNF546
CSTF2T
SLC39A6
ZNF764
ZNF688
METTL8
DCAF17
PRRC2B
CCDC120
RMND5A
CLPTM1
APOC2
CNPY1
LMLN
IQCG
STX1A
STX18
CYC1
GPAA1
EXOSC4
TCTEX1D4
PLK3
BTBD19
TBCB
POLR2I
OVOL3
NME4
DECR2
PGAP6
FAM89A
SNX27
SSH2
EFCAB5
TYW3
CRYZ
ACOX3
TRMT44
PSMD2
CLEC18C
SPSB1
RIPPLY3
RXRA
HEBP2
CLASP2
SNRPE
STAC2
ZNF841
RAB33A
PNPO
ZNF302
AIFM1
RPTOR
GSTP1
UTP25
PTCHD4
TMEM72
OPN1SW
CCDC136
DEDD
ARL15
COL9A3
MRPL54
APBA3
ZXDC
GSTM5
UBOX5
FASTKD5
BAZ2A
TXLNB
AJUBA
IL21R
IFI6
NRL
DCAF11
KLHL20
GTF2B
ANKRD13C
ETFA
BANP
GGH
PDP2
MED11
ZMYND15
CXCL16
CC2D2B
OSGIN1
RSF1
AAMDC
CEP120
SIKE1
VPS45
ARF1
COA6
NSA2
GFM2
CDIPT
DCP1B
LRFN3
VAX1
NUP205
AP2A2
DHRS3
CHID1
CREBL2
ADCY3
FAM228B
TP53I3
SF3B6
TPK1
TMEM30A
RAF1
NFKBIL1
DDX39B
ATP6V1G2
NR1H3
ACP2
OPA1
RMND1
ARMT1
TRIM5
SURF2
SURF1
RPL7A
MED22
TRIM22
CTSK
CHMP7
ZNF317
ALG10
PRSS41