ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
MTRNR2L8
ITGB3BP
EFCAB7
BSDC1
KCNJ15
SUPT7L
SLC4A1AP
ATF7IP
KDM3A
ZNF408
ARHGAP1
GABPB2
RCAN1
RPL27
COL4A6
COL4A5
MTRNR2L2
SF3A3
COX16
SMG5
CDIPT
MMACHC
CCDC163
PPP6R1
COPS4
NDUFB3
FAM126B
PIH1D2
NKAPD1
RBBP5
HDAC8
NME1-NME2
NME1
AURKAIP1
COX7A2
PRPSAP1
INTS5
MTF2
RPS26
TUT1
LY6K
DNAJC16
RABGAP1
KDM5C
MED18
EIF2S1
ATP6V1D
TBL1X
RPS7
CLPTM1
CALCRL
SMG8
SLC33A1
ARHGAP39
STAT3
AHCYL1
PAXBP1
SELENOH
STC1
INO80B
CCNI
RGPD1
RGPD2
ITFG2
SLFN12
CDK12
HAX1
ZNF226
RFFL
TCTEX1D4
BTBD19
DHX16
AIFM1
DUSP6
ZNF571
ZNF540
WDR83OS
WDR83
GPC6
KDM1A
UBB
RMND1
ARMT1
SSBP1
EIF3F
ZDHHC6
VTI1A
IGFL4
THG1L
GTPBP3
ARMCX5-GPRASP2
ARMCX5
CELF1
PSMB7
ABRACL
IFTAP
GTF2H4
ZMPSTE24
UTP3
ISY1-RAB43
ISY1
STK40
CCDC174
MTBP
MRPL13
PPIL3
NIF3L1
ILF2
LRIG2
RCAN2
RPH3AL
NOL12
ALG14
ZNF331
AP1G1
RNF125
REXO4
PACSIN2
UQCRC2
C1orf174
KAZN
MICALL1
GBA
YWHAQ
PLEKHG1
PPIP5K2
GIN1
TTC26
ZNF383
ZNF585B
PPRC1
TRIM5
RAD51AP1
C12orf4
ZW10
RPA2
IL17F
ZNF56
EIF5A
DNAJC25-GNG10
DNAJC25
ZNF790
TRUB2
COQ4
MRPS23
EFHD1
TFB1M
VTA1
NMBR
TMEM101
DNAJB12
DDX41
PIKFYVE
FAM124B
FAAP20
CSNK1E
ZBTB25
ZNF165
NEMF
TRMO
YPEL3
TMEM242
SLC25A53
RPL38
FRRS1
MITD1
UFC1
TFPT
PRPF31
LSG1
RNF207
ARMC1
RPL11
TBC1D19
SIN3B
BNIP1
TIMM10
SCARB1
MED11
B4GALT3
PDE12
TNPO3
UBE3B
IFI6
GTF3C3
MAST2
RABGAP1L
LRP6
HEATR1
PES1
TM2D1
PSMD3
KANSL3
TOMM40
C3AR1
CASP10
VPS52
RPS18
NEK2
ZRANB2
ADRA1A
TEFM
SLC35B1
POLR3A
HEMK1
RERE
RUVBL1
PCNP
RAB30
RBM25
PLK3
PEX3
ADAT2
SNX17
EIF2B4
ATP5MC2
ZNF461
SULT1C2
UFD1
CDC45
TTI2
DPP9
TIMM22
VPS35L
EIF3E
AASDH
AAAS
NOL8
CENPP
COIL
SLC39A9
ERH
GPATCH3
PAFAH2
SPHK2
RPL18
NR1H3
ACP2
SNRPB
CEP120
CLASP2
SMIM12
ZNF335
ZNF510
NEURL4
IPO4
EPRS1
ZBTB45
TTC14
TBC1D9
MTR
ZNF585A
DDX42
CCDC47
PHF5A
ACO2
CCNC
SNRPD1
CHMP7
INKA2
DDX20
SESN1
CEP57L1
DDX18
ANKRD13C
FBXW7
YJU2
ZNF221
AKR1A1
CCDC97
TRAPPC8
PIGL
MDM4
CDK5RAP1
TMEM259
GTF2B
PREPL
CAMKMT
CMSS1
KCTD20
DMAP1
TIMM9
KIAA0586
GYPC
ALG10B
DHX8
PDSS2
FRA10AC1
LURAP1
DYNLRB2
EFCAB14
JMJD1C
COMMD2
MAN1C1
CREM
SLITRK5
ZNF484
MRPS15
IPO13
DBF4B
ZNF793
MED23
PPIH
USO1
FAF1
CLN3
TTC32
POLR1H
ZNF260
ZBTB40
POLG
RBL1
ZNF2
ZSCAN4
SEC16B
NUF2
NBPF1
FDXACB1
C11orf1
SRSF1
KIAA0319
TUFT1
ATG4C
DNAJB4
KAT7
FUBP1
SLC1A3
CCDC59
ANKRD17
KDM8
MOB4
UQCRH
LRRC41
GLIPR1L2
SH2D5
TMEM128
GALM
MNAT1
BANP
SMARCD1
DMAC2
KIF2C
LYPLA2
SF3B5
RPL26
TM9SF4
CCDC107
ZNF806
C19orf48
INTS4
LIMA1
MRPL1
KRR1
BAIAP2
MED16
ACBD4
CZIB
EIF3D
PSMB6
RTTN
INTS2
DNM2
LACTBL1
IRF9
C11orf49
PCBP2
CSTF2T
SCP2
NR1H2
SH2B1
ZNF302
NCOA7
CDK19
AMD1
RFXANK
BORCS8
SF3A1
CCDC157
HIRIP3
RPL37A
MRPS33
GOSR1
PRRG2
NOSIP
OAZ3
MRPL9
PSMD9
HPD
CCDC130
TTLL12
SNIP1
PDE7B
UIMC1
OSBPL8
ZNHIT3
CALCB
SUGCT
MPLKIP
ARL14EP
ZBTB8OS
RBBP4
MVB12A
TIMM50
NRDE2
SREK1IP1
CWC27
CDC5L
PHB2
PEAK1
HMG20A
TNFAIP1
IFT20
INSYN2B
SUGP1
MAU2
CYB561D1
POC1B-GALNT4
CHST4
NME7
BLZF1
NSA2
GFM2
RSPH3
ZNF791
ZNF490
ZNF613
WDPCP
MDH1
ZMYM6
USF1
WDR55
CORO2A
PRKCI
WDR11
NOP16
HIGD2A
CRADD
MRPS18C
HELQ
BRF2
AAR2
SCYL3
UBQLN1
COASY
SOD2
WTAP
AJUBA
INO80C
TMED1
TYSND1
S100A13
S100A1
WDR36
ZNF48
UTP11
WASF2
ZSCAN30
DCT
SLC39A6
NRL
SLC35A4
APBB3
DCAF11
HAUS4
CD2BP2
RUFY3
CES3
SLC25A44
BORCS7
ZNF570
ZNF569
TMEM30A
CEP162
BPNT1
STARD10
CAND1
QRICH1
SIRT4
TCIM
C8orf37
LSM5
ATP5MC3
CYB5R4
UBQLN4
LAMTOR2
GPX1
LMNTD1
SCNM1
LYSMD1
CNPY2
CPN2
SLC7A11
RCC1
MBNL2
TBX18
SEPHS2
LTA4H
NEK4
TRMT1
ADPRS
TMBIM1
STAT6
ZNF350
SNX12
CCNT1
ACTR6
ABCD2
MTRNR2L10
MRPL48
GABPA
ATP5PF
TBC1D22A
PSMD8
XPNPEP3
ST13
GABARAPL1
TPGS1
SRRM1
ARHGEF10L
TSFM
RIF1
CGGBP1
C3orf38
CALM2
MRPL54
APBA3
RC3H2
KIF20A
BRD8
SIRT3
PSMD13
CFAP298-TCP10L
CFAP298
NUP54
ZKSCAN2
GPN3
FAM216A
TRMT11
HBS1L
GOSR2
WDR5B
SLC35E2A
TPK1
FNTB
ETFBKMT
PLEKHG2
HACD2
FGD4
ATAD5
MRPL45
PRKCSH
CCDC151
PMF1-BGLAP
PMF1
RAI14
NHS
NECAP2
ZNF300
TAF15
PLPP5
NECAP1
PSME3
ENDOV
FAM13A
RPL22
ZNF566
ZNF573
MSANTD3
DSTYK
ZSCAN22
DDX46
HAUS6
RPS29
FOXO3B
ZFC3H1
THAP2
GCNT2
POLR2J3
SLC30A6
SLC35F2
ADGRL1
RPAIN
NUP88
COPS7A
MZT1
BORA
TTC39A
HTR3A
GORASP2
EIF4A2
HEXIM1
KXD1
AP3S2
DNAJC11
LZTR1
TAF13
UBR2
FCRLA
C4orf51
EIF1AD
BANF1
GSTA4
GNAL
SRFBP1
ARHGAP24
NOLC1
TMEM208
LRRC29
C2CD5
DYNC1I2
CUL2
SNU13
TBCB
POLR2I
TXN2
CACTIN
AARSD1
RUFY4
C6orf118
SULT2A1
TATDN3
NSL1
ZNF391
RWDD1
PLS1
TXNDC17
KIAA0753
NXT2
DRG2
GTF3C5
SFSWAP
SRP54
SLC35A1
CREBL2
TTC5
GTPBP2
POGLUT3
TTC31
CCDC142
CUL3
FUCA1
SLC35E4
CDRT1
ZFP30
SMG7
SLC18B1
MEGF8
NOL11
CCNG2
UTP25
SIAH1
PUS10
PEX13
THOC5
YARS2
CLCN3
ACBD5
DNAL1
RTCB
YLPM1
DYNC2I2
RBM8A
ELSPBP1
NIP7
COG8
SRSF4
NOCT
TIPRL
PIP4P1
PHF12
TBC1D1
LUC7L2
FMC1-LUC7L2
FMC1
RPS12
PNISR
RPS27A
CLHC1
RRBP1
OBSL1
INHA
TRMT112
PRDX5
NPAS4
CCDC90B
CMPK1
MAP3K7
SULT1C4
POC5
CD320
MPDU1
LOC100996842
SNRPG
CEP85L
U2SURP
BCL2L13
DEDD
ATP2C1
SPIDR
CACYBP
SLC35D1
ARHGAP9
MARS1
GPRC5A
HMGB1
USPL1
GALK2
COPS2
RPS3A
TAS1R1
NOL9
THRAP3
AMPD3
ABCF2
LRP10
PRSS23
SF3B6
FAM228B
UBOX5
FASTKD5
MTOR
ZNF180
ORAI3
NSUN3
DHFR2
ELAC2
ERAL1
PIK3CB
ZNF416
GTSE1
FIG4
AK9
DHRS13
OSGEPL1
ZNF286A
CLASP1
PRCC
GABARAP
MTREX
DHX29
IFIT3
CALHM5
F2RL2
ZNF623
RPL29
CCDC43
ZNF829
ZNF568
PPIG
RBM45
SENP1
PFKM
NGDN
YTHDF2
GPR137
ACVR1
CHD8
MRPL27
EME1
USP9X
PSMB5
SEMA5B
NKX3-2
HOXB13
POLDIP3
PRPF18
NSUN4
CENPF
ACP3
OS9
STRIP1
TRMT5
SLC38A6
CLUAP1
DCP1B
FKBP8
CCAR2
CFAP20
TENT2
UROD
TRIM46
KRTCAP2
APOL2
HECTD3
DCLRE1C
EYA3
ZFYVE26
TMBIM6
RBMS3
SNX3
ACSL1
PEF1
GRWD1
PKDCC
SCAND1
UBE2Q1
ANXA11
ATP6V0D1
PUM3
EFTUD2
CCDC103
MGRN1
AP2S1
GRN
TMX1
NDUFS7
COPS7B
CLTC
ERLIN1
MRM3
GLOD4
PDE6D
STX12
FLRT3
TSR1
SGSM2
TMEM102
CPPED1
C18orf21
TNFRSF19
NUP107
VIRMA
RNF220
ZNF529
ADIPOR1
COA3
CNTD1
PCNX3
MAP3K11
FNIP2
WDR74
COA6
MPHOSPH10
MCEE
BAG6
PMVK
POLD4
HSPE1-MOB4
HSPE1
HSPD1
CRKL
MAN2C1
SBNO1
NKAP
ZNF700
NUP35
CHM
ILF3
FAM135A
KLKB1
TACO1
SNRPD3
GUCD1
ATG101
TMEM167B
RANBP2
CABIN1
RGL2
ZNF565
ZNF146
MTIF2
SDHAF3
FAM234A
SPAG9
MRPL19
PNO1
AGPAT4
SH2D3C
UBE2I
LIN54
ING4
MEIG1
CSRNP3
IWS1
MRPS10
DNAJA3
THAP3
DYRK4
RHOT1
CRNKL1
CFAP61
TAF12
MRPL24
SUFU
ACTR1A
ZSCAN23
SH3BP4
SLITRK1
RAB3GAP2
SLC39A11
ISG20
PAK1IP1
C6orf52
ZDHHC12
RPL5
PHIP
BCKDHB
TOMM22
NAA38
NDUFA9
AKAP3
CYB5D1
SUPV3L1
LOC644090
ARL14EPL
SNAP47
JMJD4
ZNF582
BAZ2A
CARS1
ZNF24
SPR
GRIPAP1
KLK10
MAGOH
PSMA1
METTL18
C1orf112
FAM199X
UBE2Z
TMEM69
LMAN2
RFC1
MAD2L1BP
RANGAP1
DLAT
CDK7
SYCP2L
MFN2
SULF1
CSNK2A1
VPS13B
PDK2
MED24
ARL17B
ARL17A
RIOK2
TMEM63C
GMEB1
TRIP4
HLA-E
ADRM1
PDCD6
C11orf65
SLC35A5
ATG3
C19orf25
PYROXD2
NAPA
TRIM23
TRAPPC13
SHLD3
RNF121
LOC100133315
MORC3
RPL18A
MPC2
DCAF6
EXOSC5
BCKDHA
CELF3
AARS2
RPTOR
PPOX
HIBCH
NUP205
BRCA1
TRIM2
FASTKD2
SARS1
RPS27
NCLN
N4BP2L2
PARK7
ATP6V0E2
TAF11
MBNL1
CACHD1
ZBTB20
ANKS1A
ADGRF2
RPS14
MDC1
CTH
BTRC
ALDOA
PPIL2
INPP4B
ZNF14
PRR13
SZRD1
OXA1L
EPHA7
PARP2
RPS19
TTC21B
VPS45
SLC35E2B
PTPA